Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20386 Vaccinium macrocarpon HOM05D004711 ORTHO05D005594 1.4e-78 296.2 144 100.0
Rhsim05G0232600 Rhododendron simsii HOM05D004711 ORTHO05D005594 1.6e-63 246.1 133 88.0
CSS0041259 Camellia sinensis var. sinensis HOM05D004711 ORTHO05D005594 1.0e-54 216.9 133 81.2
CSS0008345 Camellia sinensis var. sinensis HOM05D004711 ORTHO05D005594 1.2e-53 213.4 133 80.5
Dinv16951 Davidia involucrata HOM05D004711 ORTHO05D005594 3.4e-53 211.8 133 77.4
Actinidia29018 Actinidia chinensis HOM05D004711 ORTHO05D005594 1.1e-51 206.8 129 78.3
CSS0021593 Camellia sinensis var. sinensis HOM05D004711 ORTHO05D005594 1.8e-51 206.1 134 78.4
Actinidia11492 Actinidia chinensis HOM05D004711 ORTHO05D005594 9.2e-51 203.8 133 76.7
Hma1.2p1_0537F.1_g174195 Hydrangea macrophylla HOM05D004711 ORTHO05D005594 5.2e-46 188.0 133 70.7
Lj2C57T4 Lonicera japonica HOM05D004711 ORTHO05D005594 3.4e-45 185.3 133 71.4
Actinidia32572 Actinidia chinensis HOM05D004711 ORTHO05D005594 7.5e-45 184.1 123 74.8
DCAR_015327 Daucus carota HOM05D004711 ORTHO05D005594 6.4e-44 181.0 133 66.2
Lj3A939T103 Lonicera japonica HOM05D004711 ORTHO05D005594 1.1e-43 180.3 138 68.8
Oeu063842.1 Olea europaea HOM05D004711 ORTHO05D005594 1.4e-43 179.9 133 67.7
Nitab4.5_0000048g0270 Nicotiana tabacum HOM05D004711 ORTHO05D005594 2.3e-41 172.6 132 64.4
Nitab4.5_0001876g0050 Nicotiana tabacum HOM05D004711 ORTHO05D005594 1.5e-40 169.9 132 62.9
MD04G1176700 Malus domestica HOM05D004711 ORTHO05D005594 7.3e-40 167.5 137 65.0
Peaxi162Scf00732g00135 Petunia axillaris HOM05D004711 ORTHO05D005594 4.7e-39 164.9 132 61.4
Haze_21199 Corylus avellana HOM05D004711 ORTHO05D005594 2.3e-38 162.5 135 65.9
PGR004G0084 Punica granatum HOM05D004711 ORTHO05D005594 5.2e-38 161.4 133 65.4
Duzib268G1837 Durio zibethinus HOM05D004711 ORTHO05D005594 8.9e-38 160.6 135 66.7
QL07p031674 Quercus lobata HOM05D004711 ORTHO05D005594 8.9e-38 160.6 133 68.4
PGSC0003DMG400002318 Solanum tuberosum HOM05D004711 ORTHO05D005594 1.2e-37 160.2 132 60.6
Cc06_g00250 Coffea canephora HOM05D004711 ORTHO05D005594 1.5e-37 159.8 134 62.7
TAR633G0481 Trochodendron aralioides HOM05D004711 ORTHO05D005594 1.5e-37 159.8 133 64.7
Thecc.04G149100 Theobroma cacao HOM05D004711 ORTHO05D005594 2.0e-37 159.5 135 64.4
Atru.chr8.78 Acer truncatum HOM05D004711 ORTHO05D005594 4.4e-37 158.3 133 63.2
Duzib151G1091 Durio zibethinus HOM05D004711 ORTHO05D005594 5.8e-37 157.9 135 65.2
Eucgr.K01295 Eucalyptus grandis HOM05D004711 ORTHO05D005594 5.8e-37 157.9 135 65.2
COL.COLO4_21250 Corchorus olitorius HOM05D004711 ORTHO05D005594 7.5e-37 157.5 135 65.9
FAN02G0291 Fragaria x ananassa HOM05D004711 ORTHO05D005594 7.5e-37 157.5 136 61.8
FAN14G5267 Fragaria x ananassa HOM05D004711 ORTHO05D005594 7.5e-37 157.5 136 61.8
CAN.G180.2 Capsicum annuum HOM05D004711 ORTHO05D005594 1.3e-36 156.8 132 59.1
Gohir.A03G087100 Gossypium hirsutum HOM05D004711 ORTHO05D005594 1.3e-36 156.8 135 63.7
Migut.J00018 Erythranthe guttata HOM05D004711 ORTHO05D005594 1.7e-36 156.4 133 63.2
FvH4_6g09520 Fragaria vesca HOM05D004711 ORTHO05D005594 1.7e-36 156.4 136 61.0
Sopen09g013790 Solanum pennellii HOM05D004711 ORTHO05D005594 1.7e-36 156.4 132 60.6
RcHm_v2.0_Chr3g0460111 Rosa chinensis HOM05D004711 ORTHO05D005594 2.2e-36 156.0 136 62.5
FAN05G2346 Fragaria x ananassa HOM05D004711 ORTHO05D005594 2.9e-36 155.6 136 61.0
Oeu026938.1 Olea europaea HOM05D004711 ORTHO05D005594 6.4e-36 154.5 133 60.2
Gohir.D02G106500 Gossypium hirsutum HOM05D004711 ORTHO05D005594 1.1e-35 153.7 135 62.2
Solyc09g031517.1 Solanum lycopersicum HOM05D004711 ORTHO05D005594 1.1e-35 153.7 132 59.8
Hund03689 Selenicereus undatus HOM05D004711 ORTHO05D005594 2.4e-35 152.5 131 61.1
Gorai.005G121000 Gossypium raimondii HOM05D004711 ORTHO05D005594 4.1e-35 151.8 135 62.2
Prupe.6G296400 Prunus persica HOM05D004711 ORTHO05D005594 4.1e-35 151.8 136 59.6
TAR636G2556 Trochodendron aralioides HOM05D004711 ORTHO05D005594 4.1e-35 151.8 136 61.8
Cpa.g.sc72.61 Carica papaya HOM05D004711 ORTHO05D005594 9.2e-35 150.6 133 62.4
AUR62006439 Chenopodium quinoa HOM05D004711 ORTHO05D005594 9.2e-35 150.6 131 60.3
AUR62029794 Chenopodium quinoa HOM05D004711 ORTHO05D005594 9.2e-35 150.6 131 60.3
MD12G1191700 Malus domestica HOM05D004711 ORTHO05D005594 9.2e-35 150.6 137 61.3
Oeu030100.1 Olea europaea HOM05D004711 ORTHO05D005594 9.2e-35 150.6 133 58.6
Ciclev10011470m.g Citrus clementina HOM05D004711 ORTHO05D005594 2.7e-34 149.1 133 63.2
SGA_v2.0_scaffold85G26592 Striga asiatica HOM05D004711 ORTHO05D005594 3.5e-34 148.7 133 61.7
Manes.08G169400 Manihot esculenta HOM05D004711 ORTHO05D005594 7.8e-34 147.5 133 61.7
Hma1.2p1_2237F.1_g317760 Hydrangea macrophylla HOM05D004711 ORTHO05D005594 1.0e-33 147.1 145 55.2
EL10Ac7g17131 Beta vulgaris HOM05D004711 ORTHO05D005594 1.3e-33 146.7 131 59.5
Potri.016G139500 Populus trichocarpa HOM05D004711 ORTHO05D005594 1.3e-33 146.7 136 61.8
VMungo1383G3052 Vigna mungo HOM05D004711 ORTHO05D005594 1.3e-33 146.7 137 59.9
ECA247G0260 Erigeron canadensis HOM05D004711 ORTHO05D005594 8.6e-33 144.1 136 60.3
Sabra04G0156000 Salix brachista HOM05D004711 ORTHO05D005594 4.3e-32 141.7 135 61.5
TWI74G1298 Tripterygium wilfordii HOM05D004711 ORTHO05D005594 7.3e-32 141.0 133 60.9
HanXRQChr10g0287631 Helianthus annuus HOM05D004711 ORTHO05D005594 1.2e-31 140.2 136 58.1
FAN09G1198 Fragaria x ananassa HOM05D004711 ORTHO05D005594 1.6e-31 139.8 125 59.2
Nn1g01604 Nelumbo nucifera HOM05D004711 ORTHO05D005594 1.6e-31 139.8 135 60.0
GSVIVG01029882001 Vitis vinifera HOM05D004711 ORTHO05D005594 1.6e-31 139.8 138 58.0
Phvul.008G080400 Phaseolus vulgaris HOM05D004711 ORTHO05D005594 2.8e-31 139.0 137 58.4
Ca_07784_v3 Cicer arietinum L. HOM05D004711 ORTHO05D005594 4.7e-31 138.3 133 56.4
Manes.09G122600 Manihot esculenta HOM05D004711 ORTHO05D005594 4.7e-31 138.3 137 62.0
Sabra06G0086000 Salix brachista HOM05D004711 ORTHO05D005594 4.7e-31 138.3 131 58.8
Lj1g0020419 Lotus japonicus HOM05D004711 ORTHO05D005594 6.2e-31 137.9 135 57.0
Potri.006G110700 Populus trichocarpa HOM05D004711 ORTHO05D005594 8.1e-31 137.5 133 57.9
Sc20g0007170 Simmondsia chinensis HOM05D004711 ORTHO05D005594 1.8e-30 136.3 131 58.0
Medtr7g073720 Medicago truncatula HOM05D004711 ORTHO05D005594 3.1e-30 135.6 137 57.7
Glyma.18G216300 Glycine max HOM05D004711 ORTHO05D005594 4.0e-30 135.2 136 57.4
Ah.15g089840 Amaranthus hybridus HOM05D004711 ORTHO05D005594 5.2e-30 134.8 131 56.5
Glyma.09G272800 Glycine max HOM05D004711 ORTHO05D005594 1.2e-29 133.7 136 56.6
Gohir.D02G002600 Gossypium hirsutum HOM05D004711 ORTHO05D005594 1.5e-29 133.3 135 60.0
Nn2g10244 Nelumbo nucifera HOM05D004711 ORTHO05D005594 1.5e-29 133.3 122 61.5
TPR.G24318 Trifolium pratense HOM05D004711 ORTHO05D005594 2.6e-29 132.5 137 57.7
MSTRG.5483 Avicennia marina HOM05D004711 ORTHO05D005594 7.6e-29 131.0 133 56.4
Gorai.005G003100 Gossypium raimondii HOM05D004711 ORTHO05D005594 9.9e-29 130.6 135 59.3
Gohir.A02G002300 Gossypium hirsutum HOM05D004711 ORTHO05D005594 3.8e-28 128.6 137 57.7
SalBow5G3438 Salvia bowleyana HOM05D004711 ORTHO05D005594 4.9e-28 128.3 133 55.6
Nn5g26805 Nelumbo nucifera HOM05D004711 ORTHO05D005594 3.2e-27 125.6 121 56.2
arahy.Tifrunner.gnm1.ann1.QFH4DU Arachis hypogaea HOM05D004711 ORTHO05D005594 4.1e-27 125.2 138 58.0
arahy.Tifrunner.gnm1.ann1.C9I5IG Arachis hypogaea HOM05D004711 ORTHO05D005594 7.1e-27 124.4 138 58.7
Aqoxy4G03297 Aquilegia oxysepala HOM05D004711 ORTHO05D005594 1.2e-26 123.6 135 52.6
ClCG04G006250 Citrullus lanatus HOM05D004711 ORTHO05D005594 4.6e-26 121.7 135 54.1
MELO3C025248.2 Cucumis melo HOM05D004711 ORTHO05D005594 4.6e-26 121.7 135 54.8
CsaV3_4G027310 Cucumis sativus L. HOM05D004711 ORTHO05D005594 4.6e-26 121.7 136 54.4
TWI53G0370 Tripterygium wilfordii HOM05D004711 ORTHO05D005594 4.6e-26 121.7 129 55.8
HanXRQChr01g0000511 Helianthus annuus HOM05D004711 ORTHO05D005594 7.8e-26 120.9 137 51.1
unitig_22.g6618 Utricularia gibba HOM05D004711 ORTHO05D005594 3.9e-25 118.6 133 49.6
Glyma.16G220600 Glycine max HOM05D004711 ORTHO05D005594 8.7e-25 117.5 132 49.2
PSO339G1855 Papaver somniferum HOM05D004711 ORTHO05D005594 1.1e-24 117.1 136 48.5
Zm00001eb290760 Zea mays HOM05D004711 ORTHO05D005594 1.9e-24 116.3 148 47.3
Lsat_1_v5_gn_9_39741 Lactuca sativa HOM05D004711 ORTHO05D005594 3.3e-24 115.5 134 52.2
Sed0027783 Sechium edule HOM05D004711 ORTHO05D005594 7.3e-24 114.4 138 52.9
Lalb_Chr01g0023911 Lupinus albus HOM05D004711 ORTHO05D005594 9.6e-24 114.0 137 51.1
unitig_578.g15918 Utricularia gibba HOM05D004711 ORTHO05D005594 9.6e-24 114.0 142 47.9
PSO384G0846 Papaver somniferum HOM05D004711 ORTHO05D005594 1.2e-23 113.6 136 47.8
Phvul.010G058700 Phaseolus vulgaris HOM05D004711 ORTHO05D005594 1.6e-23 113.2 131 48.1
Zm00001eb368960 Zea mays HOM05D004711 ORTHO05D005594 4.7e-23 111.7 146 45.9
Glyma.03G001700 Glycine max HOM05D004711 ORTHO05D005594 1.8e-22 109.8 130 46.2
Zm00001eb352090 Zea mays HOM05D004711 ORTHO05D005594 1.8e-22 109.8 150 46.0
Os01g0819000 Oryza sativa ssp. japonica HOM05D004711 ORTHO05D005594 6.9e-22 107.8 147 44.2
Aa31LG5G18710 Aethionema arabicum HOM05D004711 ORTHO05D005594 1.2e-21 107.1 136 48.5
C03p44020 Brassica napus HOM05D004711 ORTHO05D005594 2.6e-21 105.9 136 50.7
Sed0008721 Sechium edule HOM05D004711 ORTHO05D005594 3.4e-21 105.5 139 51.1
BcaC05g29602 Brassica carinata HOM05D004711 ORTHO05D005594 4.4e-21 105.1 136 50.0
BolC5t34578H Brassica oleracea HOM05D004711 ORTHO05D005594 4.4e-21 105.1 135 50.4
Thhalv10020404m.g Eutrema salsugineum HOM05D004711 ORTHO05D005594 4.4e-21 105.1 136 52.2
BcaC05g29601 Brassica carinata HOM05D004711 ORTHO05D005594 5.8e-21 104.8 136 50.0
C05p59190 Brassica napus HOM05D004711 ORTHO05D005594 5.8e-21 104.8 136 50.0
AL3G19670 Arabidopsis lyrata HOM05D004711 ORTHO05D005594 7.6e-21 104.4 135 50.4
AT3G08670 Arabidopsis thaliana HOM05D004711 ORTHO05D005594 7.6e-21 104.4 136 52.2
BcaC01g04190 Brassica carinata HOM05D004711 ORTHO05D005594 7.6e-21 104.4 136 50.0
BolC3t16673H Brassica oleracea HOM05D004711 ORTHO05D005594 7.6e-21 104.4 136 50.0
CARHR082970 Cardamine hirsuta HOM05D004711 ORTHO05D005594 9.9e-21 104.0 136 52.2
A05p40110 Brassica napus HOM05D004711 ORTHO05D005594 1.3e-20 103.6 136 51.5
Sp3g07110 Schrenkiella parvula HOM05D004711 ORTHO05D005594 2.2e-20 102.8 136 50.7
BcaB04g18575 Brassica carinata HOM05D004711 ORTHO05D005594 2.9e-20 102.4 136 51.5
ATR1127G195 Amborella trichopoda HOM05D004711 ORTHO05D005594 3.8e-20 102.1 132 43.9
Carub.0003s0780 Capsella rubella HOM05D004711 ORTHO05D005594 4.9e-20 101.7 136 51.5
VMungo0331G0284 Vigna mungo HOM05D004711 ORTHO05D005594 4.9e-20 101.7 136 47.8
A03p36410 Brassica napus HOM05D004711 ORTHO05D005594 8.4e-20 100.9 136 48.5
Os05g0480600 Oryza sativa ssp. japonica HOM05D004711 ORTHO05D005594 8.4e-20 100.9 149 42.3
PSO017G6473 Papaver somniferum HOM05D004711 ORTHO05D005594 1.9e-19 99.8 148 47.3
PSO170G0854 Papaver somniferum HOM05D004711 ORTHO05D005594 1.2e-18 97.1 147 46.3
BraA03t12809Z Brassica rapa HOM05D004711 ORTHO05D005594 2.3e-17 92.8 136 49.3
AUR62035966 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.9e-16 89.7 120 43.3
THA.LOC104823329 Tarenaya hassleriana HOM05D004711 ORTHO05D005594 4.3e-16 88.6 130 46.2
Lj3g0009953 Lotus japonicus HOM05D004711 ORTHO05D005594 5.6e-16 88.2 133 43.6
HPP92_019048 Vanilla planifolia HOM05D004711 ORTHO05D005594 5.6e-16 88.2 142 39.4
THA.LOC104816161 Tarenaya hassleriana HOM05D004711 ORTHO05D005594 1.6e-15 86.7 134 44.0
THA.LOC104816162 Tarenaya hassleriana HOM05D004711 ORTHO05D005594 1.6e-15 86.7 134 44.0
THA.LOC104816163 Tarenaya hassleriana HOM05D004711 ORTHO05D005594 1.6e-15 86.7 134 44.0
Oeu028468.1 Olea europaea HOM05D004711 ORTHO05D005594 3.6e-15 85.5 102 47.1
Lsat_1_v5_gn_5_151680 Lactuca sativa HOM05D004711 ORTHO05D005594 6.2e-15 84.7 133 41.4
BcaB04g18579 Brassica carinata HOM05D004711 ORTHO05D005594 3.4e-13 79.0 137 43.1
THA.LOC104806652 Tarenaya hassleriana HOM05D004711 ORTHO05D015363 4.5e-13 78.6 136 39.0
CDE07G2076 Ceratophyllum demersum HOM05D004711 ORTHO05D005594 7.4e-08 61.2 157 35.0
Sp5g10710 Schrenkiella parvula HOM05D014005 ORTHO05D015363 2.1e-07 59.7 133 30.1
Thhalv10010380m.g Eutrema salsugineum HOM05D014005 ORTHO05D015363 8.1e-07 57.8 131 30.5
C08p26770 Brassica napus HOM05D014005 ORTHO05D015363 1.1e-06 57.4 133 35.3
BolC8t50290H Brassica oleracea HOM05D014005 ORTHO05D015363 1.1e-06 57.4 133 35.3
AL5G31980 Arabidopsis lyrata HOM05D014005 ORTHO05D015363 1.4e-06 57.0 131 35.9
BraA09t39927Z Brassica rapa HOM05D014005 ORTHO05D015363 2.4e-06 56.2 127 34.6
A09p44670 Brassica napus HOM05D014005 ORTHO05D015363 3.1e-06 55.8 127 34.6
ECA248G3895 Erigeron canadensis HOM05D001126 ORTHO05D000991 4.0e-06 55.5 100 42.0
CDE06G0837 Ceratophyllum demersum HOM05D000050 ORTHO05D005594 5.3e-06 55.1 135 34.8


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