Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20314 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 1.1e-51 206.5 108 100.0
Rhsim05G0223600 Rhododendron simsii HOM05D004264 ORTHO05D004680 7.4e-37 157.1 108 74.1
vmacro05245 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 6.3e-36 154.1 108 73.1
vmacro05226 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 6.9e-35 150.6 108 71.3
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 7.2e-32 140.6 107 68.2
Hma1.2p1_0479F.1_g161540 Hydrangea macrophylla HOM05D004264 ORTHO05D004680 2.1e-31 139.0 107 66.4
Actinidia29078 Actinidia chinensis HOM05D004264 ORTHO05D004680 6.7e-30 134.0 107 64.5
QL07p034201 Quercus lobata HOM05D004264 ORTHO05D004680 1.9e-29 132.5 107 61.7
TAR623G1256 Trochodendron aralioides HOM05D004264 ORTHO05D004680 1.9e-29 132.5 107 62.6
Actinidia11558 Actinidia chinensis HOM05D004264 ORTHO05D004680 4.3e-29 131.3 107 65.4
GSVIVG01030301001 Vitis vinifera HOM05D004264 ORTHO05D004680 2.2e-28 129.0 108 60.2
TWI74G1571 Tripterygium wilfordii HOM05D004264 ORTHO05D004680 6.3e-28 127.5 107 62.6
Cfa017136 Carpinus fangiana HOM05D004264 ORTHO05D004680 8.2e-28 127.1 107 59.8
Haze_21059 Corylus avellana HOM05D004264 ORTHO05D004680 1.8e-27 125.9 108 60.2
CiPaw.09G213400 Carya illinoinensis HOM05D004264 ORTHO05D004680 2.0e-26 122.5 107 57.0
Atru.chr8.2305 Acer truncatum HOM05D004264 ORTHO05D004680 2.2e-25 119.0 107 55.1
Lsat_1_v5_gn_6_104820 Lactuca sativa HOM05D004264 ORTHO05D004680 2.2e-25 119.0 105 58.1
Manes.09G110101 Manihot esculenta HOM05D004264 ORTHO05D004680 3.8e-25 118.2 107 58.9
Lj3g0014192 Lotus japonicus HOM05D004264 ORTHO05D004680 8.5e-25 117.1 107 56.1
Nn8g40771 Nelumbo nucifera HOM05D004264 ORTHO05D004680 8.5e-25 117.1 107 53.3
HanXRQChr02g0036811 Helianthus annuus HOM05D004264 ORTHO05D004680 1.1e-24 116.7 108 56.5
Prupe.6G283000 Prunus persica HOM05D004264 ORTHO05D004680 3.2e-24 115.2 108 53.7
Ciclev10013172m.g Citrus clementina HOM05D004264 ORTHO05D004680 5.5e-24 114.4 108 53.7
TAR209G0008 Trochodendron aralioides HOM05D004264 ORTHO05D004680 7.2e-24 114.0 109 56.0
Thecc.05G009200 Theobroma cacao HOM05D004264 ORTHO05D004680 1.2e-23 113.2 107 55.1
DCAR_018676 Daucus carota HOM05D004264 ORTHO05D004680 2.1e-23 112.5 108 53.7
PGR004G2045 Punica granatum HOM05D004264 ORTHO05D004680 2.7e-23 112.1 107 53.3
Glyma.07G154451 Glycine max HOM05D004264 ORTHO05D004680 4.7e-23 111.3 108 54.6
Potri.016G122350 Populus trichocarpa HOM05D004264 ORTHO05D004680 6.1e-23 110.9 107 51.4
Duzib093G0558 Durio zibethinus HOM05D004264 ORTHO05D004680 7.9e-23 110.5 107 55.1
Gohir.D01G219000 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.0e-22 110.2 107 55.1
HanXRQChr13g0390241 Helianthus annuus HOM05D004264 ORTHO05D004680 1.4e-22 109.8 108 56.5
Gohir.D10G240300 Gossypium hirsutum HOM05D004264 ORTHO05D004680 3.0e-22 108.6 108 54.6
Gohir.D11G227700 Gossypium hirsutum HOM05D004264 ORTHO05D004680 3.0e-22 108.6 108 53.7
Hund14916 Selenicereus undatus HOM05D004264 ORTHO05D004680 3.0e-22 108.6 107 54.2
Gorai.011G276000 Gossypium raimondii HOM05D004264 ORTHO05D004680 3.9e-22 108.2 108 54.6
Sopen04g028370 Solanum pennellii HOM05D004264 ORTHO05D004680 3.9e-22 108.2 108 52.8
Solyc04g072210.4 Solanum lycopersicum HOM05D004264 ORTHO05D004680 5.1e-22 107.8 107 52.3
Eucgr.G00894 Eucalyptus grandis HOM05D004264 ORTHO05D004680 6.7e-22 107.5 108 50.9
Glyma.18G205200 Glycine max HOM05D004264 ORTHO05D004680 8.8e-22 107.1 108 52.8
Gorai.002G265700 Gossypium raimondii HOM05D004264 ORTHO05D004680 8.8e-22 107.1 104 53.8
Cpa.g.sc120.22 Carica papaya HOM05D004264 ORTHO05D004680 1.1e-21 106.7 114 50.9
ClCG04G006790 Citrullus lanatus HOM05D004264 ORTHO05D004680 1.5e-21 106.3 107 47.7
FAN14G2539 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.5e-21 106.3 108 49.1
CANSAT35G1133 Cannabis sativa HOM05D004264 ORTHO05D004680 3.3e-21 105.1 107 50.5
RcHm_v2.0_Chr3g0462181 Rosa chinensis HOM05D004264 ORTHO05D004680 3.3e-21 105.1 108 50.0
FvH4_6g10920 Fragaria vesca HOM05D004264 ORTHO05D004680 5.7e-21 104.4 108 49.1
FAN09G4226 Fragaria x ananassa HOM05D004264 ORTHO05D004680 7.4e-21 104.0 107 49.5
PSO801G0087 Papaver somniferum HOM05D004264 ORTHO05D004680 7.4e-21 104.0 107 49.5
Sc09g0006620 Simmondsia chinensis HOM05D004264 ORTHO05D004680 7.4e-21 104.0 107 47.7
FAN05G1725 Fragaria x ananassa HOM05D004264 ORTHO05D004680 9.7e-21 103.6 107 49.5
FAN05G1746 Fragaria x ananassa HOM05D004264 ORTHO05D004680 9.7e-21 103.6 107 49.5
FAN05G3264 Fragaria x ananassa HOM05D004264 ORTHO05D004680 9.7e-21 103.6 107 49.5
CsaV3_4G026470 Cucumis sativus L. HOM05D004264 ORTHO05D004680 1.7e-20 102.8 107 45.8
Duzib106G1969 Durio zibethinus HOM05D004264 ORTHO05D004680 1.7e-20 102.8 107 50.5
PSO339G3729 Papaver somniferum HOM05D004264 ORTHO05D004680 1.7e-20 102.8 107 49.5
FAN02G3507 Fragaria x ananassa HOM05D004264 ORTHO05D004680 3.7e-20 101.7 107 48.6
MD12G1177600 Malus domestica HOM05D004264 ORTHO05D004680 3.7e-20 101.7 98 54.1
COL.COLO4_14480 Corchorus olitorius HOM05D004264 ORTHO05D004680 4.8e-20 101.3 104 50.0
Sed0006342 Sechium edule HOM05D004264 ORTHO05D004680 4.8e-20 101.3 107 43.0
MSTRG.5553 Avicennia marina HOM05D004264 ORTHO05D004680 8.2e-20 100.5 108 50.0
Aqoxy3G03065 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 6.9e-19 97.4 102 49.0
Lalb_Chr01g0023271 Lupinus albus HOM05D004264 ORTHO05D004680 6.9e-19 97.4 98 51.0
VMungo1383G0816 Vigna mungo HOM05D004264 ORTHO05D004680 6.9e-19 97.4 105 46.7
Gohir.A01G229100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.2e-18 96.7 107 49.5
THA.LOC104816187 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 1.2e-18 96.7 107 43.9
MD04G1163700 Malus domestica HOM05D004264 ORTHO05D004680 2.6e-18 95.5 96 51.0
MELO3C026013.2 Cucumis melo HOM05D004264 ORTHO05D004680 3.4e-18 95.1 108 45.4
VMungo1383G0682 Vigna mungo HOM05D004264 ORTHO05D004680 7.7e-18 94.0 105 45.7
Medtr1g100900 Medicago truncatula HOM05D004264 ORTHO05D004680 1.7e-17 92.8 106 46.2
DCAR_015367 Daucus carota HOM05D004264 ORTHO05D004680 2.9e-17 92.0 107 47.7
CARHR083200 Cardamine hirsuta HOM05D004264 ORTHO05D004680 1.1e-16 90.1 107 43.0
Phvul.008G094300 Phaseolus vulgaris HOM05D004264 ORTHO05D004680 2.5e-16 89.0 120 41.7
AL3G19870 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 2.1e-15 85.9 107 41.1
Migut.J00117 Erythranthe guttata HOM05D004264 ORTHO05D004680 2.7e-15 85.5 108 43.5
THA.LOC104827057 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 3.6e-15 85.1 107 40.2
ECA233G6002 Erigeron canadensis HOM05D004264 ORTHO05D004680 6.1e-15 84.3 96 50.0
Ah.12g058940 Amaranthus hybridus HOM05D004264 ORTHO05D004680 3.0e-14 82.0 99 40.4
Cpa.g.sc82.40 Carica papaya HOM05D004264 ORTHO05D004680 3.0e-14 82.0 85 51.8
Psat3g124240 Pisum sativum HOM05D004264 ORTHO05D004680 3.0e-14 82.0 98 44.9
Gohir.D01G029100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 5.2e-14 81.3 100 45.0
Migut.D01629 Erythranthe guttata HOM05D004264 ORTHO05D004680 8.8e-14 80.5 108 40.7
Gorai.004G095600 Gossypium raimondii HOM05D004264 ORTHO05D004680 1.1e-13 80.1 107 43.9
Gohir.D04G142200 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.6e-13 79.0 100 44.0
AL6G10480 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 3.3e-13 78.6 107 43.0
Gohir.D12G051300 Gossypium hirsutum HOM05D004264 ORTHO05D004680 3.3e-13 78.6 100 44.0
Sp3g07270 Schrenkiella parvula HOM05D004264 ORTHO05D004680 3.3e-13 78.6 107 39.3
AT3G08880 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 4.4e-13 78.2 107 37.4
Carub.0003s0799 Capsella rubella HOM05D004264 ORTHO05D004680 5.7e-13 77.8 106 39.6
MBI10_g27417_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 5.7e-13 77.8 102 42.2
BolC1t05486H Brassica oleracea HOM05D004264 ORTHO05D004680 4.8e-12 74.7 109 38.5
Aa31LG1G23180 Aethionema arabicum HOM05D004264 ORTHO05D004680 6.3e-12 74.3 101 39.6
Carub.0006s0026 Capsella rubella HOM05D004264 ORTHO05D004680 1.1e-11 73.6 107 40.2
Gorai.011G076200 Gossypium raimondii HOM05D004264 ORTHO05D004680 2.4e-11 72.4 73 50.7
MBI03_g10315_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 3.1e-11 72.0 112 40.2
Gorai.004G074900 Gossypium raimondii HOM05D004264 ORTHO05D004680 5.3e-11 71.2 94 43.6
HPP92_011366 Vanilla planifolia HOM05D004264 ORTHO05D004680 2.6e-10 68.9 108 36.1
Zm00001eb068100 Zea mays HOM05D004264 ORTHO05D004680 2.6e-10 68.9 101 37.6
Zm00001eb423320 Zea mays HOM05D004264 ORTHO05D004680 1.7e-09 66.2 99 39.4
AT5G01570 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 3.8e-09 65.1 97 39.2
BcaC09g47997 Brassica carinata HOM05D004264 ORTHO05D004680 1.9e-08 62.8 114 32.5
Sabra16G0118000 Salix brachista HOM05D004264 ORTHO05D004680 1.9e-08 62.8 106 34.9
Thhalv10021618m.g Eutrema salsugineum HOM05D004264 ORTHO05D004680 9.4e-08 60.5 113 29.2
BcaC09g48040 Brassica carinata HOM05D004264 ORTHO05D004680 1.2e-07 60.1 114 31.6
BNapus_Darmor_BZH_scaffold_167p00190 Brassica napus HOM05D004264 ORTHO05D004680 1.2e-07 60.1 114 31.6
BcaNung00021 Brassica carinata HOM05D004264 ORTHO05D004680 4.7e-07 58.2 101 33.7
BraA03t12802Z Brassica rapa HOM05D004264 ORTHO05D004680 6.1e-07 57.8 99 30.3
BraA01t04327Z Brassica rapa HOM05D004264 ORTHO05D004680 1.4e-06 56.6 110 30.9
C03p54850 Brassica napus HOM05D004264 ORTHO05D004680 1.8e-06 56.2 100 31.0
BcaC04g20357 Brassica carinata HOM05D004264 ORTHO05D004680 2.3e-06 55.8 100 32.0
A03p36330 Brassica napus HOM05D004264 ORTHO05D004680 5.2e-06 54.7 99 30.3
A03p61420 Brassica napus HOM05D004264 ORTHO05D004680 5.2e-06 54.7 100 31.0


User provided reference genes

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