Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20275 Vaccinium macrocarpon HOM05D002957 ORTHO05D009332 2.9e-51 204.9 100 100.0
RhsimUnG0048300 Rhododendron simsii HOM05D002957 ORTHO05D009332 1.5e-23 112.8 71 77.5
vmacro20279 Vaccinium macrocarpon HOM05D002957 ORTHO05D009332 3.3e-23 111.7 67 85.1
Rhsim05G0215900 Rhododendron simsii HOM05D002957 ORTHO05D009332 9.6e-23 110.2 64 82.8
Actinidia11584 Actinidia chinensis HOM05D002957 ORTHO05D009332 1.3e-22 109.8 67 79.1
RhsimUnG0048400 Rhododendron simsii HOM05D002957 ORTHO05D009332 1.8e-21 105.9 65 76.9
Actinidia29100 Actinidia chinensis HOM05D002957 ORTHO05D009332 9.0e-21 103.6 67 76.1
Hma1.2p1_0362F.1_g136260 Hydrangea macrophylla HOM05D002957 ORTHO05D009332 2.6e-20 102.1 67 73.1
Hma1.2p1_0362F.1_g136270 Hydrangea macrophylla HOM05D002957 ORTHO05D009332 2.6e-20 102.1 67 73.1
SalBow5G1577 Salvia bowleyana HOM05D002957 ORTHO05D009332 7.6e-20 100.5 67 70.1
arahy.Tifrunner.gnm1.ann1.A2UBGC Arachis hypogaea HOM05D002957 ORTHO05D009332 1.7e-19 99.4 64 70.3
arahy.Tifrunner.gnm1.ann1.Z0DP5C Arachis hypogaea HOM05D002957 ORTHO05D009332 1.7e-19 99.4 64 70.3
CSS0035001 Camellia sinensis var. sinensis HOM05D002957 ORTHO05D009332 2.9e-19 98.6 67 70.1
Cc06_g01310 Coffea canephora HOM05D002957 ORTHO05D009332 2.9e-19 98.6 67 71.6
GSVIVG01011156001 Vitis vinifera HOM05D002957 ORTHO05D009332 2.9e-19 98.6 67 71.6
TAR633G1929 Trochodendron aralioides HOM05D002957 ORTHO05D009332 6.4e-19 97.4 67 68.7
Gohir.A09G165400 Gossypium hirsutum HOM05D002957 ORTHO05D009332 1.4e-18 96.3 65 70.8
Gohir.D09G161000 Gossypium hirsutum HOM05D002957 ORTHO05D009332 1.4e-18 96.3 65 70.8
Gorai.006G182700 Gossypium raimondii HOM05D002957 ORTHO05D009332 1.4e-18 96.3 65 70.8
Ciclev10012720m.g Citrus clementina HOM05D002957 ORTHO05D009332 2.4e-18 95.5 67 70.1
HanXRQChr01g0006141 Helianthus annuus HOM05D002957 ORTHO05D009332 2.4e-18 95.5 67 70.1
ECA248G0294 Erigeron canadensis HOM05D002957 ORTHO05D009332 4.2e-18 94.7 67 68.7
Oeu034563.1 Olea europaea HOM05D002957 ORTHO05D009332 4.2e-18 94.7 67 67.2
Solyc10g076700.2 Solanum lycopersicum HOM05D002957 ORTHO05D009332 4.2e-18 94.7 67 68.7
Sopen10g028300 Solanum pennellii HOM05D002957 ORTHO05D009332 4.2e-18 94.7 67 68.7
Atru.chr8.2245 Acer truncatum HOM05D002957 ORTHO05D009332 5.4e-18 94.4 67 68.7
Eucgr.K02980 Eucalyptus grandis HOM05D002957 ORTHO05D009332 5.4e-18 94.4 65 69.2
CAN.G1004.2 Capsicum annuum HOM05D002957 ORTHO05D009332 9.3e-18 93.6 67 67.2
PGSC0003DMG400019121 Solanum tuberosum HOM05D002957 ORTHO05D009332 9.3e-18 93.6 67 68.7
MELO3C009167.2 Cucumis melo HOM05D002957 ORTHO05D009332 1.2e-17 93.2 67 67.2
Thecc.05G015700 Theobroma cacao HOM05D002957 ORTHO05D009332 1.2e-17 93.2 65 69.2
TWI77G0804 Tripterygium wilfordii HOM05D002957 ORTHO05D009332 1.2e-17 93.2 66 69.7
QL07p019780 Quercus lobata HOM05D002957 ORTHO05D009332 1.6e-17 92.8 66 65.2
CsaV3_3G033780 Cucumis sativus L. HOM05D002957 ORTHO05D009332 2.1e-17 92.4 67 65.7
PGR004G1270 Punica granatum HOM05D002957 ORTHO05D009332 2.1e-17 92.4 64 68.8
unitig_8.g3227 Utricularia gibba HOM05D002957 ORTHO05D009332 3.5e-17 91.7 64 65.6
Migut.J00165 Erythranthe guttata HOM05D002957 ORTHO05D009332 4.6e-17 91.3 67 65.7
ClCG10G022140 Citrullus lanatus HOM05D003053 ORTHO05D003431 6.0e-17 90.9 67 65.7
Manes.08G092300 Manihot esculenta HOM05D002957 ORTHO05D009332 6.0e-17 90.9 64 70.3
CiPaw.09G209400 Carya illinoinensis HOM05D002957 ORTHO05D009332 7.9e-17 90.5 67 61.2
Lsat_1_v5_gn_5_150440 Lactuca sativa HOM05D002957 ORTHO05D009332 7.9e-17 90.5 67 65.7
Lalb_Chr07g0193601 Lupinus albus HOM05D002957 ORTHO05D009332 7.9e-17 90.5 64 67.2
MBI03_g37291_MAGBIO Magnolia biondii HOM05D002957 ORTHO05D009332 7.9e-17 90.5 64 67.2
Haze_21005 Corylus avellana HOM05D002957 ORTHO05D009332 1.0e-16 90.1 67 67.2
Peaxi162Scf00014g00412 Petunia axillaris HOM05D002957 ORTHO05D009332 1.3e-16 89.7 67 64.2
COL.COLO4_14532 Corchorus olitorius HOM05D002957 ORTHO05D009332 1.8e-16 89.4 65 67.7
Medtr4g015860 Medicago truncatula HOM05D002957 ORTHO05D009332 1.8e-16 89.4 64 65.6
Potri.006G100600 Populus trichocarpa HOM05D002957 ORTHO05D009332 1.8e-16 89.4 64 67.2
Sabra06G0077400 Salix brachista HOM05D002957 ORTHO05D009332 1.8e-16 89.4 64 65.6
Sed0006401 Sechium edule HOM05D002957 ORTHO05D009332 3.9e-16 88.2 67 62.7
DCAR_024020 Daucus carota HOM05D002957 ORTHO05D009332 6.7e-16 87.4 67 59.7
Phvul.010G000900 Phaseolus vulgaris HOM05D002957 ORTHO05D009332 6.7e-16 87.4 63 63.5
Duzib093G1190 Durio zibethinus HOM05D002957 ORTHO05D009332 1.1e-15 86.7 65 64.6
EL10Ac5g12031 Beta vulgaris HOM05D002957 ORTHO05D009332 1.5e-15 86.3 67 67.2
Nitab4.5_0001455g0030 Nicotiana tabacum HOM05D002957 ORTHO05D009332 1.5e-15 86.3 67 61.2
TPR.G13326 Trifolium pratense HOM05D002957 ORTHO05D009332 1.5e-15 86.3 64 60.9
Nitab4.5_0000119g0130 Nicotiana tabacum HOM05D002957 ORTHO05D009332 1.9e-15 85.9 67 61.2
CDE07G1950 Ceratophyllum demersum HOM05D002957 ORTHO05D009332 2.5e-15 85.5 65 64.6
Psat7g245080 Pisum sativum HOM05D002957 ORTHO05D009332 2.5e-15 85.5 64 64.1
Cpa.g.sc4.46 Carica papaya HOM05D002957 ORTHO05D009332 4.3e-15 84.7 63 65.1
Cfa017203 Carpinus fangiana HOM05D002957 ORTHO05D009332 4.3e-15 84.7 67 62.7
Glyma.01G121700 Glycine max HOM05D002957 ORTHO05D009332 4.3e-15 84.7 62 62.9
VMungo0331G1386 Vigna mungo HOM05D002957 ORTHO05D009332 4.3e-15 84.7 63 63.5
Lj3A953T52 Lonicera japonica HOM05D002957 ORTHO05D009332 5.6e-15 84.3 62 64.5
Lj3g0019800 Lotus japonicus HOM05D002957 ORTHO05D009332 1.3e-14 83.2 63 63.5
PSO339G4196 Papaver somniferum HOM05D002957 ORTHO05D009332 1.3e-14 83.2 66 62.1
AUR62007341 Chenopodium quinoa HOM05D002957 ORTHO05D009332 1.6e-14 82.8 61 70.5
AUR62018658 Chenopodium quinoa HOM05D002957 ORTHO05D009332 2.1e-14 82.4 61 70.5
SGA_v2.0_scaffold85G26733 Striga asiatica HOM05D002957 ORTHO05D009332 1.1e-13 80.1 64 59.4
Carub.0003s0803 Capsella rubella HOM05D002957 ORTHO05D009332 1.4e-13 79.7 66 56.1
CARHR083250 Cardamine hirsuta HOM05D002957 ORTHO05D009332 2.4e-13 79.0 66 56.1
BraSC256t45931Z Brassica rapa HOM05D002957 ORTHO05D009332 3.1e-13 78.6 66 56.1
Sp3g07310 Schrenkiella parvula HOM05D002957 ORTHO05D009332 4.0e-13 78.2 66 56.1
Hund11202 Selenicereus undatus HOM05D002957 ORTHO05D009332 5.3e-13 77.8 60 65.0
Sc22g0001790 Simmondsia chinensis HOM05D002957 ORTHO05D009332 5.3e-13 77.8 63 63.5
BcaC05g29625 Brassica carinata HOM05D002957 ORTHO05D009332 6.9e-13 77.4 66 56.1
A05p39930 Brassica napus HOM05D002957 ORTHO05D009332 6.9e-13 77.4 66 56.1
C05p58970 Brassica napus HOM05D002957 ORTHO05D009332 6.9e-13 77.4 66 56.1
BolC5t34550H Brassica oleracea HOM05D002957 ORTHO05D009332 6.9e-13 77.4 66 56.1
CANSAT35G0815 Cannabis sativa HOM05D002957 ORTHO05D009332 6.9e-13 77.4 62 56.5
Thhalv10021504m.g Eutrema salsugineum HOM05D002957 ORTHO05D009332 9.0e-13 77.0 66 54.5
THA.LOC104823296 Tarenaya hassleriana HOM05D002957 ORTHO05D009332 9.0e-13 77.0 64 53.1
Ah.12g055380 Amaranthus hybridus HOM05D002957 ORTHO05D009332 1.2e-12 76.6 54 70.4
AL3G19920 Arabidopsis lyrata HOM05D002957 ORTHO05D009332 2.0e-12 75.9 66 54.5
AT3G08920 Arabidopsis thaliana HOM05D002957 ORTHO05D009332 7.6e-12 73.9 66 51.5
Os03g0289400 Oryza sativa ssp. japonica HOM05D002957 ORTHO05D009332 2.2e-11 72.4 62 53.2
Glyma.03G057800 Glycine max HOM05D002957 ORTHO05D009332 2.9e-11 72.0 64 56.2
Hund11198 Selenicereus undatus HOM05D002957 ORTHO05D009332 8.4e-11 70.5 60 60.0
Aa31LG5G18880 Aethionema arabicum HOM05D002957 ORTHO05D009332 1.9e-10 69.3 66 50.0
HPP92_013880 Vanilla planifolia HOM05D002957 ORTHO05D009332 2.7e-09 65.5 62 51.6
HPP92_013886 Vanilla planifolia HOM05D002957 ORTHO05D009332 2.7e-09 65.5 62 51.6
Aqoxy2G00881 Aquilegia oxysepala HOM05D002957 ORTHO05D009332 3.5e-09 65.1 45 66.7
Zm00001eb013370 Zea mays HOM05D002957 ORTHO05D009332 1.1e-07 60.1 51 56.9
CBR_g3156 Chara braunii HOM05D002957 ORTHO05D009332 1.9e-07 59.3 65 41.5
Pp3c10_2220 Physcomitrium patens HOM05D002957 ORTHO05D009332 2.5e-07 58.9 62 46.8
SMO203G0236 Selaginella moellendorffii HOM05D002957 ORTHO05D009332 9.6e-07 57.0 57 49.1
Mapoly0002s0231 Marchantia polymorpha HOM05D002957 ORTHO05D009332 2.8e-06 55.5 66 39.4


User provided reference genes

Program Settings