Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 1.4e-150 536.2 260 100.0
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 4.3e-107 391.7 252 79.0
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 1.2e-104 383.6 250 77.6
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 1.1e-97 360.5 250 72.8
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 2.1e-93 346.3 254 70.9
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.7e-93 345.9 237 70.9
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 6.0e-93 344.7 255 68.2
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 5.1e-92 341.7 248 70.2
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 1.1e-91 340.5 249 69.5
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 1.1e-91 340.5 258 67.8
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 1.5e-91 340.1 248 69.8
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 2.5e-91 339.3 250 68.4
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 2.5e-91 339.3 255 65.9
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 4.3e-91 338.6 313 60.7
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 9.6e-91 337.4 248 68.5
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 8.1e-90 334.3 255 66.3
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 4.0e-89 332.0 251 68.5
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 6.9e-89 331.3 250 68.4
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 1.2e-88 330.5 253 67.2
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 2.0e-88 329.7 253 66.8
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 4.5e-88 328.6 250 66.8
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 4.5e-88 328.6 254 67.3
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 7.6e-88 327.8 262 64.5
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 2.9e-87 325.9 253 66.0
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 3.8e-87 325.5 253 68.4
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 1.1e-86 323.9 255 65.9
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 1.1e-86 323.9 285 60.4
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 1.1e-86 323.9 247 68.0
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 1.4e-86 323.6 261 65.1
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.4e-86 323.6 253 66.8
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 3.5e-85 318.9 255 65.1
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 6.0e-85 318.2 248 65.7
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 1.0e-84 317.4 231 68.0
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 1.3e-84 317.0 262 63.0
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 1.8e-84 316.6 248 64.9
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 2.3e-84 316.2 250 64.8
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 3.0e-84 315.8 267 64.4
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 3.0e-84 315.8 263 63.5
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 5.1e-84 315.1 248 65.3
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 6.7e-84 314.7 257 63.4
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 6.7e-84 314.7 248 66.5
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 2.5e-83 312.8 250 63.6
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 4.3e-83 312.0 242 65.7
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 4.3e-83 312.0 261 62.5
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 4.3e-83 312.0 246 63.4
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 9.6e-83 310.8 252 64.7
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 2.1e-82 309.7 251 63.7
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 2.1e-82 309.7 257 63.0
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 2.1e-82 309.7 247 64.0
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 2.1e-82 309.7 246 65.0
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 6.2e-82 308.1 311 54.0
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 1.4e-81 307.0 257 62.3
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 1.8e-81 306.6 251 62.9
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 2.4e-81 306.2 258 61.2
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 3.1e-81 305.8 250 62.0
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 5.3e-81 305.1 251 63.7
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 6.9e-81 304.7 251 62.5
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 9.0e-81 304.3 250 62.8
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 9.0e-81 304.3 248 64.9
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 4.5e-80 302.0 239 66.9
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 7.6e-80 301.2 259 60.2
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 1.3e-79 300.4 253 64.0
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 2.2e-79 299.7 253 61.7
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 2.9e-79 299.3 251 62.5
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 6.5e-79 298.1 255 61.6
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 1.4e-78 297.0 249 63.1
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 1.4e-78 297.0 247 62.8
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 1.9e-78 296.6 251 62.2
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 4.2e-78 295.4 251 62.5
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 4.2e-78 295.4 247 61.9
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 7.1e-78 294.7 262 60.7
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 1.2e-77 293.9 210 69.5
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 7.9e-77 291.2 250 60.0
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 7.9e-77 291.2 247 61.5
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 3.0e-76 289.3 246 62.6
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.1e-75 287.3 264 56.8
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 9.7e-75 284.3 245 60.4
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 1.3e-74 283.9 239 61.1
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 8.2e-74 281.2 239 60.3
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 5.0e-71 271.9 254 58.3
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 5.1e-68 261.9 260 57.3
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 3.1e-65 252.7 200 66.0
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 9.1e-65 251.1 287 49.5
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 3.4e-64 249.2 232 58.6
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 5.9e-64 248.4 269 50.9
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 2.5e-62 243.0 198 64.1
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 2.5e-62 243.0 253 54.9
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 1.6e-61 240.4 207 62.8
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 8.8e-60 234.6 238 52.9
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 5.7e-59 231.9 179 67.6
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 1.4e-57 227.3 277 48.4
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 3.1e-57 226.1 291 47.4
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 1.5e-56 223.8 273 49.1
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 3.6e-53 212.6 182 63.2
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 3.9e-52 209.1 216 52.8
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 1.5e-51 207.2 231 51.1
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 3.7e-50 202.6 287 41.5
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 2.4e-41 173.3 120 69.2
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 5.9e-40 168.7 132 63.6
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 5.2e-36 155.6 132 60.6
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 4.4e-35 152.5 187 48.7
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 2.6e-27 126.7 90 67.8
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 4.4e-19 99.4 67 70.1
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 1.4e-17 94.4 67 70.1
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 8.9e-12 75.1 40 80.0


User provided reference genes

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