Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 1.6e-258 895.6 447 100.0
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 2.6e-136 489.6 460 61.5
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 7.3e-123 444.9 470 55.5
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 3.9e-116 422.5 425 57.9
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 1.6e-106 390.6 430 54.0
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.8e-104 382.1 509 48.1
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 4.9e-103 379.0 440 49.5
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 6.1e-101 372.1 427 52.0
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 2.3e-100 370.2 430 51.9
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 1.5e-99 367.5 431 53.4
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 9.7e-99 364.8 461 47.5
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.2e-98 363.6 431 49.9
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 4.8e-98 362.5 439 48.3
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 8.2e-98 361.7 465 47.7
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 4.5e-96 355.9 430 48.1
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 2.2e-95 353.6 430 49.1
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 2.2e-95 353.6 430 48.1
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 5.0e-95 352.4 440 48.9
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 1.4e-94 350.9 384 52.1
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 1.9e-94 350.5 423 49.4
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 3.2e-94 349.7 430 48.6
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 3.6e-93 346.3 444 48.0
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 4.6e-93 345.9 430 47.0
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 1.8e-92 344.0 423 49.4
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 3.0e-92 343.2 429 49.2
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 3.0e-92 343.2 423 47.0
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 5.1e-92 342.4 444 45.0
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 5.1e-92 342.4 427 49.9
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 1.1e-91 341.3 461 44.3
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 1.5e-91 340.9 429 47.8
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.5e-91 340.1 419 49.2
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 7.4e-91 338.6 425 48.7
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 9.7e-91 338.2 457 45.7
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 9.7e-91 338.2 422 48.1
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 9.7e-91 338.2 425 48.7
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 1.3e-90 337.8 430 47.4
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 1.3e-90 337.8 430 47.4
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 1.3e-90 337.8 430 47.4
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 2.2e-90 337.0 440 45.9
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 2.2e-90 337.0 428 47.9
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 3.7e-90 336.3 432 46.8
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 6.3e-90 335.5 440 45.5
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 8.2e-90 335.1 442 47.1
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.1e-89 334.7 432 46.8
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 1.1e-89 334.7 430 45.8
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 1.4e-89 334.3 431 48.5
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 1.4e-89 334.3 427 47.1
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.8e-89 334.0 425 45.9
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 1.8e-89 334.0 427 45.9
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 2.4e-89 333.6 438 46.3
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 2.4e-89 333.6 438 46.1
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 2.4e-89 333.6 438 46.1
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 4.1e-89 332.8 433 47.3
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 6.9e-89 332.0 476 44.1
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 6.9e-89 332.0 410 47.6
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 1.2e-88 331.3 463 43.2
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 2.6e-88 330.1 444 46.6
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 3.4e-88 329.7 424 46.2
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 4.5e-88 329.3 463 43.8
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 1.0e-87 328.2 429 46.9
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 1.3e-87 327.8 431 45.0
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 2.9e-87 326.6 431 45.9
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 2.9e-87 326.6 428 46.3
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 2.9e-87 326.6 458 44.3
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 5.0e-87 325.9 445 46.3
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 6.5e-87 325.5 429 45.0
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 8.5e-87 325.1 429 46.2
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 1.1e-86 324.7 440 45.0
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 1.4e-86 324.3 431 47.6
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 1.4e-86 324.3 428 46.5
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 4.2e-86 322.8 525 41.9
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 5.5e-86 322.4 426 46.0
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 7.2e-86 322.0 462 43.1
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 7.2e-86 322.0 440 45.5
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 1.6e-85 320.9 441 44.4
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 2.1e-85 320.5 472 43.4
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 6.1e-85 318.9 459 44.9
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 1.4e-84 317.8 464 43.5
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 1.8e-84 317.4 441 44.4
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 2.3e-84 317.0 451 44.1
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 3.0e-84 316.6 429 45.7
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 3.9e-84 316.2 430 45.3
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 2.8e-82 310.1 442 45.2
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 6.3e-82 308.9 396 49.7
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 2.4e-81 307.0 418 45.7
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 3.1e-81 306.6 444 43.7
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 1.7e-79 300.8 515 39.0
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 1.1e-78 298.1 425 44.2
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.9e-78 297.4 439 45.6
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 7.2e-78 295.4 409 44.5
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.8e-76 290.8 462 44.4
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 3.7e-74 283.1 466 40.8
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 8.2e-74 282.0 438 41.3
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 3.5e-72 276.6 411 44.0
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.6e-69 267.7 375 46.4
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 8.0e-61 238.8 370 43.2
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 1.5e-59 234.6 378 39.7
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 2.3e-55 220.7 438 34.5
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.9e-55 220.3 261 48.3
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 7.2e-54 215.7 261 51.0
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 3.6e-53 213.4 384 35.4
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 1.8e-52 211.1 389 36.8
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 3.0e-52 210.3 433 37.4
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 1.5e-51 208.0 379 36.9
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 1.3e-47 194.9 494 29.6
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 1.9e-46 191.0 193 54.4
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 1.6e-45 188.0 345 38.6
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 1.7e-42 177.9 393 35.1
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 1.1e-41 175.3 437 30.4
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 7.0e-41 172.6 264 41.7
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.6e-37 160.2 114 70.2
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 6.8e-36 156.0 117 67.5
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 8.3e-34 149.1 117 66.7
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 7.1e-33 146.0 320 35.3
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 1.6e-32 144.8 254 39.0
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 6.0e-32 142.9 336 34.2
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 8.9e-28 129.0 96 64.6
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 1.4e-25 121.7 60 93.3
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 6.8e-20 102.8 432 27.1
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.2e-19 102.1 53 84.9
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.2e-19 102.1 71 67.6
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 1.3e-18 98.6 55 72.7
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 1.7e-15 88.2 273 30.8
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 5.1e-15 86.7 366 29.5
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 8.7e-15 85.9 65 63.1
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.9e-12 76.3 59 71.2
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.9e-12 76.3 59 71.2
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.1e-08 64.7 213 29.1
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 1.3e-07 62.0 69 46.4
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 9.6e-06 55.8 216 32.4


User provided reference genes

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