Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 2.7e-161 572.0 303 100.0
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 2.2e-123 446.0 291 85.9
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 7.9e-121 437.6 316 75.0
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.8e-109 399.8 312 73.4
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.5e-103 380.2 309 67.3
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 2.8e-102 375.9 310 66.1
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.1e-101 374.0 309 68.3
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 5.5e-98 361.7 314 65.0
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 4.0e-96 355.5 314 64.3
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 5.2e-96 355.1 315 63.2
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 3.4e-95 352.4 310 64.8
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 4.4e-95 352.1 316 63.9
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 1.3e-94 350.5 315 64.8
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 3.7e-94 349.0 313 63.3
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 4.9e-94 348.6 317 64.0
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 8.3e-94 347.8 313 62.9
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 1.1e-93 347.4 310 64.8
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 1.4e-93 347.1 315 63.8
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 1.8e-93 346.7 316 63.6
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 3.1e-93 345.9 309 62.5
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 7.0e-93 344.7 315 63.2
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 9.2e-93 344.4 313 62.9
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 1.6e-92 343.6 310 62.9
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 2.7e-92 342.8 306 61.8
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 2.9e-91 339.3 313 62.6
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 9.5e-90 334.3 304 61.5
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 9.5e-90 334.3 310 61.3
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 1.8e-88 330.1 311 62.1
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 2.3e-88 329.7 309 62.1
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 5.2e-88 328.6 302 62.3
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 8.9e-88 327.8 324 58.0
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 3.4e-87 325.9 311 61.4
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 5.7e-87 325.1 313 59.4
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 1.1e-85 320.9 309 59.9
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 1.1e-85 320.9 308 58.1
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 5.4e-85 318.5 344 56.1
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 9.2e-85 317.8 307 58.0
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 1.2e-84 317.4 311 62.4
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 1.2e-84 317.4 299 60.5
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.6e-84 315.5 299 60.5
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 5.9e-84 315.1 303 60.4
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 7.8e-84 314.7 312 58.0
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.0e-83 314.3 316 55.7
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.3e-83 313.9 299 60.2
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 1.3e-83 313.9 307 58.3
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.0e-83 312.8 299 60.2
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.0e-83 312.8 299 60.2
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 3.0e-83 312.8 311 59.5
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 2.5e-82 309.7 295 58.6
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 4.3e-82 308.9 349 52.4
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 9.5e-82 307.8 302 60.6
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 1.2e-81 307.4 318 58.2
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 1.6e-81 307.0 313 60.1
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.1e-81 306.6 307 58.3
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 3.6e-81 305.8 318 57.9
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.4e-80 303.9 296 58.8
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 4.0e-80 302.4 266 63.5
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 6.8e-80 301.6 311 57.9
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 8.9e-80 301.2 344 52.3
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.7e-78 297.0 307 56.7
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.7e-78 295.8 321 57.3
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 1.0e-75 287.7 301 54.8
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 3.0e-75 286.2 294 56.1
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 6.6e-75 285.0 285 58.9
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 1.1e-74 284.3 294 56.5
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 4.3e-74 282.3 315 55.6
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 9.5e-74 281.2 306 53.6
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 1.2e-73 280.8 299 55.2
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 2.8e-73 279.6 234 64.5
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 6.8e-72 275.0 307 53.7
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 8.9e-72 274.6 286 56.3
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 7.5e-71 271.6 295 55.6
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 2.2e-70 270.0 302 54.0
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 3.7e-70 269.2 303 53.8
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 4.9e-70 268.9 309 52.1
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 8.3e-70 268.1 311 53.1
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 1.4e-69 267.3 325 50.5
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.9e-69 266.9 301 53.5
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 7.1e-69 265.0 312 53.2
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 1.6e-68 263.8 298 53.0
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 3.9e-67 259.2 355 47.3
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 1.1e-66 257.7 353 46.7
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 1.1e-66 257.7 305 52.8
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 4.3e-66 255.8 347 48.4
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 1.2e-63 247.7 291 52.2
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 2.9e-62 243.0 397 42.3
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 2.9e-62 243.0 311 54.0
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 4.6e-60 235.7 129 86.0
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 7.8e-60 235.0 257 56.0
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 9.0e-56 221.5 213 62.9
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 7.1e-53 211.8 109 87.2
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 3.0e-51 206.5 111 85.6
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 1.5e-50 204.1 109 87.2
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 6.2e-49 198.7 294 44.6
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 1.5e-47 194.1 124 74.2
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 2.0e-47 193.7 152 65.8
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 3.2e-45 186.4 98 86.7
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.6e-44 184.1 98 88.8
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 2.3e-43 180.3 156 58.3
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 8.7e-43 178.3 98 84.7
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 7.4e-42 175.3 94 85.1
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 1.5e-39 167.5 214 56.5
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 1.7e-38 164.1 149 54.4
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 4.2e-37 159.5 120 73.3
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 3.5e-36 156.4 98 74.5
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 1.3e-35 154.5 98 76.5
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 9.6e-34 148.3 220 49.1
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 1.3e-33 147.9 249 43.4
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.6e-25 120.9 201 47.3
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.6e-20 104.4 215 41.4
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.4e-16 91.3 192 39.1
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 2.6e-15 87.0 108 50.0
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 1.3e-14 84.7 99 55.6
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 1.3e-14 84.7 99 55.6
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 1.3e-14 84.7 99 55.6
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 2.9e-14 83.6 99 54.5
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 3.8e-14 83.2 189 39.7
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 3.2e-13 80.1 82 53.7
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 6.1e-12 75.9 41 82.9
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 3.0e-11 73.6 205 37.1
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 3.7e-09 66.6 113 45.1
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 4.8e-09 66.2 44 68.2
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 2.4e-08 63.9 114 43.0
Lsat_1_v5_gn_5_23780 Lactuca sativa HOM05D004869 ORTHO05D005893 1.3e-06 58.2 100 45.0


User provided reference genes

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