Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 1.6e-126 456.1 227 100.0
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 2.0e-47 193.4 150 66.0
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 4.1e-45 185.7 149 63.1
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 4.1e-45 185.7 149 63.1
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 1.1e-42 177.6 148 60.8
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 3.6e-41 172.6 155 58.1
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 1.8e-40 170.2 152 58.6
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 2.8e-38 162.9 151 54.3
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 1.1e-37 161.0 151 54.3
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 4.1e-37 159.1 150 56.0
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 3.5e-36 156.0 159 50.9
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 1.7e-35 153.7 148 54.7
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 6.5e-35 151.8 150 54.7
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 1.1e-34 151.0 149 56.4
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 1.9e-34 150.2 149 53.0
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 5.5e-34 148.7 150 51.3
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 1.0e-32 144.4 154 48.1
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 1.5e-31 140.6 116 53.4
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 4.4e-31 139.0 115 53.9
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 4.4e-31 139.0 152 48.0
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 7.5e-31 138.3 145 49.0
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 7.5e-31 138.3 177 44.1
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 2.2e-30 136.7 153 49.0
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 2.2e-30 136.7 161 45.3
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 6.3e-30 135.2 152 46.7
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 8.3e-30 134.8 139 46.0
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 3.1e-29 132.9 116 50.9
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 5.4e-29 132.1 148 44.6
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 7.0e-29 131.7 113 52.2
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 1.6e-28 130.6 143 48.3
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 1.6e-28 130.6 116 53.4
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 3.5e-28 129.4 153 46.4
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 4.5e-28 129.0 153 46.4
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 4.5e-28 129.0 118 50.8
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 7.7e-28 128.3 151 45.7
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 7.7e-28 128.3 153 46.4
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 7.7e-28 128.3 153 46.4
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 1.0e-27 127.9 151 45.0
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 1.0e-27 127.9 152 46.1
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 1.7e-27 127.1 149 45.0
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 2.2e-27 126.7 128 44.5
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 2.9e-27 126.3 152 44.7
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 3.8e-27 125.9 154 42.2
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 3.8e-27 125.9 140 47.1
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 5.0e-27 125.6 154 44.2
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 1.5e-26 124.0 120 47.5
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 2.5e-26 123.2 148 45.3
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 7.2e-26 121.7 115 46.1
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 7.2e-26 121.7 119 48.7
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 9.4e-26 121.3 115 46.1
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 9.4e-26 121.3 117 50.4
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 1.2e-25 120.9 148 43.9
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 3.6e-25 119.4 142 44.4
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 8.0e-25 118.2 165 41.2
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 8.0e-25 118.2 148 42.6
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 2.3e-24 116.7 156 42.3
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 2.3e-24 116.7 132 46.2
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 2.3e-24 116.7 118 46.6
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 3.0e-24 116.3 164 40.2
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 4.0e-24 115.9 118 44.1
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 4.0e-24 115.9 148 42.6
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.2e-23 114.4 163 41.7
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 2.0e-23 113.6 91 57.1
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 4.4e-23 112.5 159 39.6
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 5.7e-23 112.1 165 39.4
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 7.5e-23 111.7 150 41.3
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 9.8e-23 111.3 102 51.0
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 9.8e-23 111.3 158 39.9
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 9.8e-23 111.3 158 39.9
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 9.8e-23 111.3 151 41.1
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 9.8e-23 111.3 120 44.2
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 9.8e-23 111.3 89 55.1
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 3.7e-22 109.4 157 38.9
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 4.9e-22 109.0 109 45.9
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.1e-21 107.8 165 38.8
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.1e-21 107.8 166 38.0
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 2.4e-21 106.7 145 41.4
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 4.1e-21 105.9 95 50.5
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 4.1e-21 105.9 157 37.6
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 9.1e-21 104.8 133 42.1
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 9.1e-21 104.8 124 41.1
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 2.7e-20 103.2 198 30.8
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 3.5e-20 102.8 158 37.3
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 7.7e-20 101.7 109 44.0
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 1.7e-19 100.5 95 46.3
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 6.6e-19 98.6 138 38.4
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 4.7e-17 92.4 124 39.5
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 2.0e-15 87.0 89 43.8
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 4.4e-15 85.9 102 41.2
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 2.9e-14 83.2 153 37.3
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 3.7e-14 82.8 160 35.0
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 1.1e-13 81.3 167 33.5
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 2.4e-13 80.1 105 38.1
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.2e-12 77.8 222 26.1
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 1.3e-11 74.3 49 61.2
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 3.9e-11 72.8 150 34.0
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 1.5e-10 70.9 74 50.0
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 5.6e-10 68.9 89 42.7
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 5.6e-10 68.9 79 46.8
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 1.6e-09 67.4 151 35.1
Oeu008469.1 Olea europaea HOM05D007171 ORTHO05D008946 2.9e-06 56.6 88 40.9


User provided reference genes

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