Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 6.5e-222 773.9 422 100.0
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 2.2e-161 572.8 486 71.6
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 1.5e-149 533.5 425 72.9
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 3.4e-138 495.7 426 68.1
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 1.3e-132 477.2 380 70.3
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 1.6e-132 476.9 427 68.6
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 1.6e-132 476.9 424 70.3
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 7.6e-130 468.0 427 66.3
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 1.3e-129 467.2 424 61.8
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 6.5e-129 464.9 443 63.4
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 1.1e-128 464.2 426 62.2
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 1.4e-128 463.8 429 65.7
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 5.5e-128 461.8 428 62.9
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 1.6e-127 460.3 424 61.3
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 1.4e-126 457.2 436 63.3
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 1.8e-126 456.8 425 60.5
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 5.1e-126 455.3 424 62.7
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 6.7e-126 454.9 426 62.9
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.9e-125 453.4 422 61.1
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 3.3e-125 452.6 429 59.0
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 8.2e-124 448.0 430 58.8
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.1e-123 447.6 428 60.5
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 1.1e-123 447.6 426 59.2
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 2.4e-123 446.4 430 58.6
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 2.4e-123 446.4 433 58.9
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 2.4e-123 446.4 424 59.9
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 4.1e-123 445.7 429 60.4
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 6.9e-123 444.9 430 60.2
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 1.5e-122 443.7 427 62.1
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.0e-122 443.4 427 61.6
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 2.6e-122 443.0 432 58.3
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 2.6e-122 443.0 430 61.2
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 4.5e-122 442.2 424 60.6
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 5.9e-122 441.8 363 65.3
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 7.7e-122 441.4 425 63.3
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.0e-121 441.0 430 63.0
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.7e-121 440.3 427 61.4
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 2.9e-121 439.5 376 64.4
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 3.8e-121 439.1 426 63.4
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 3.8e-121 439.1 434 59.7
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 3.8e-121 439.1 423 61.7
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 6.5e-121 438.3 429 61.1
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 1.4e-120 437.2 425 60.0
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 1.9e-120 436.8 427 58.1
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 5.5e-120 435.3 375 64.3
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 7.2e-120 434.9 427 59.0
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 7.2e-120 434.9 425 58.1
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 9.4e-120 434.5 425 58.1
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 2.1e-119 433.3 428 57.2
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 3.6e-119 432.6 426 57.5
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 1.8e-118 430.3 425 58.4
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 3.0e-118 429.5 425 60.7
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 5.1e-118 428.7 434 57.1
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 2.2e-116 423.3 420 58.1
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.2e-116 423.3 431 61.5
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 2.8e-116 422.9 336 69.0
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 2.8e-116 422.9 373 62.7
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 2.8e-116 422.9 434 56.2
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 3.7e-116 422.5 434 56.9
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 1.1e-115 421.0 422 57.8
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.8e-115 420.2 431 61.3
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 3.1e-115 419.5 427 57.6
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 4.1e-115 419.1 431 61.3
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 5.3e-115 418.7 425 57.2
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 9.1e-115 417.9 438 55.9
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 9.1e-115 417.9 336 66.7
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 9.1e-115 417.9 435 56.8
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 2.6e-114 416.4 376 63.3
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 3.4e-114 416.0 432 55.6
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 4.5e-114 415.6 428 56.1
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 1.0e-113 414.5 542 51.8
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 1.7e-113 413.7 431 56.1
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 6.5e-113 411.8 428 54.9
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.4e-112 410.6 435 54.7
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 4.2e-112 409.1 428 55.6
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 9.4e-112 407.9 430 54.7
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 1.2e-111 407.5 438 55.7
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.6e-111 407.1 458 53.7
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 2.1e-111 406.8 422 55.2
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 2.1e-111 406.8 429 54.5
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 3.6e-111 406.0 426 56.3
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 6.1e-111 405.2 437 54.7
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 8.0e-111 404.8 431 57.8
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 1.8e-110 403.7 333 66.1
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 8.8e-110 401.4 440 54.3
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 1.7e-108 397.1 428 54.2
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 1.7e-108 397.1 427 54.1
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 4.8e-108 395.6 370 61.1
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 3.8e-105 386.0 438 51.4
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 1.5e-104 384.0 432 52.1
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 9.4e-104 381.3 426 52.1
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 1.2e-103 380.9 426 52.1
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 2.7e-103 379.8 429 53.4
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 6.7e-102 375.2 383 56.1
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 1.5e-101 374.0 320 62.5
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 2.6e-101 373.2 426 52.3
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.4e-94 350.9 328 58.5
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 5.2e-94 349.0 433 51.5
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 2.4e-91 340.1 365 54.5
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 3.8e-89 332.8 337 52.8
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 4.4e-85 319.3 346 55.2
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 4.1e-83 312.8 270 62.6
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 1.0e-81 308.1 312 56.7
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 3.3e-80 303.1 423 43.5
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.2e-76 290.4 267 58.4
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 8.0e-71 271.9 332 47.6
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 9.8e-69 265.0 379 43.0
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 2.2e-68 263.8 338 48.8
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.2e-63 248.1 318 47.8
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 3.2e-59 233.4 211 60.2
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 9.9e-53 211.8 391 36.8
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 2.6e-45 187.2 127 74.0
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 1.2e-42 178.3 135 68.9
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 2.6e-37 160.6 213 46.9
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.3e-33 148.3 89 80.9
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 1.5e-21 108.2 335 28.1
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 1.6e-15 88.2 205 34.1
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 1.8e-14 84.7 87 56.3
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 4.1e-14 83.6 143 51.0
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 9.4e-11 72.4 47 63.8
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 9.4e-11 72.4 52 59.6
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 6.1e-10 69.7 98 39.8
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 1.0e-09 68.9 120 42.5
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 1.8e-09 68.2 145 29.7


User provided reference genes

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