Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 1.6e-150 536.2 290 100.0
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 2.8e-83 312.8 291 66.0
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 3.7e-83 312.4 293 63.5
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 1.1e-82 310.8 293 62.8
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 6.1e-78 295.0 242 66.9
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.1e-74 284.3 246 65.4
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 2.6e-68 263.1 290 60.3
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 2.2e-67 260.0 292 60.6
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.6e-65 253.8 293 54.9
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 5.9e-65 251.9 292 53.4
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 1.3e-64 250.8 299 52.8
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 2.2e-64 250.0 294 58.5
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 5.0e-64 248.8 311 53.4
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 5.0e-64 248.8 298 53.4
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 5.5e-63 245.4 293 52.6
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 7.2e-63 245.0 291 53.3
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 1.2e-62 244.2 292 57.2
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 1.6e-62 243.8 293 52.2
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 2.1e-62 243.4 293 53.9
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 3.6e-62 242.7 295 57.3
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 8.0e-62 241.5 301 55.1
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 1.0e-61 241.1 299 50.8
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 3.0e-61 239.6 292 51.0
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 8.8e-61 238.0 294 57.5
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 1.2e-60 237.7 298 55.4
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 1.2e-60 237.7 299 55.5
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 1.5e-60 237.3 297 53.5
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 1.5e-60 237.3 292 51.7
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 1.5e-60 237.3 291 51.5
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 1.5e-60 237.3 294 55.4
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 2.6e-60 236.5 298 50.0
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 7.5e-60 235.0 303 50.5
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 9.8e-60 234.6 303 52.1
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 9.8e-60 234.6 300 56.7
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 1.7e-59 233.8 295 54.6
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 1.7e-59 233.8 295 51.2
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 2.8e-59 233.0 291 56.4
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 2.8e-59 233.0 299 53.2
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 3.7e-59 232.6 297 53.9
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 3.7e-59 232.6 297 53.5
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 4.9e-59 232.3 301 51.2
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 4.9e-59 232.3 299 55.5
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 1.1e-58 231.1 297 53.2
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 1.8e-58 230.3 290 53.1
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 2.4e-58 229.9 299 52.8
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 2.4e-58 229.9 293 56.7
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 4.1e-58 229.2 246 56.1
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 9.2e-58 228.0 299 51.5
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 9.2e-58 228.0 299 51.5
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 1.2e-57 227.6 296 49.3
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 1.6e-57 227.3 304 52.0
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 1.6e-57 227.3 299 48.2
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 3.5e-57 226.1 299 56.2
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 3.5e-57 226.1 290 52.1
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 1.7e-56 223.8 247 53.8
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 1.7e-56 223.8 297 53.5
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 3.8e-56 222.6 246 55.7
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 3.8e-56 222.6 302 49.3
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 3.8e-56 222.6 235 57.4
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 6.6e-56 221.9 290 53.8
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 2.5e-55 219.9 305 50.2
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 3.3e-55 219.5 292 46.9
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 4.3e-55 219.2 290 56.2
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 1.2e-54 217.6 300 48.0
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 1.6e-54 217.2 294 52.7
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 1.6e-54 217.2 295 49.2
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 3.6e-54 216.1 292 50.3
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 6.1e-54 215.3 298 47.7
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 1.4e-53 214.2 325 47.1
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 2.3e-53 213.4 291 48.1
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 2.3e-53 213.4 291 48.5
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 4.0e-53 212.6 290 52.1
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 8.9e-53 211.5 136 80.9
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 2.6e-52 209.9 292 48.3
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 2.9e-51 206.5 291 55.7
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 4.9e-51 205.7 135 74.1
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 1.4e-50 204.1 292 52.7
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 1.4e-50 204.1 321 48.0
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.8e-50 203.8 137 78.1
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 4.1e-50 202.6 290 45.5
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 5.4e-50 202.2 137 77.4
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 7.0e-50 201.8 291 49.8
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 7.0e-50 201.8 219 54.8
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 1.6e-49 200.7 290 45.9
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 2.0e-49 200.3 290 47.2
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 2.0e-49 200.3 291 47.1
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 2.0e-49 200.3 291 46.7
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 3.5e-49 199.5 291 49.8
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 3.5e-49 199.5 291 49.5
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 4.6e-49 199.1 291 49.5
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 1.7e-48 197.2 291 42.6
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 3.9e-48 196.1 250 50.0
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 1.9e-47 193.7 251 49.8
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 1.9e-47 193.7 251 49.8
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 3.6e-46 189.5 294 45.2
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 4.7e-46 189.1 250 48.8
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 6.2e-46 188.7 251 49.4
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 6.2e-46 188.7 250 48.8
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 8.0e-46 188.3 259 47.5
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 2.6e-44 183.3 137 73.0
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 7.5e-44 181.8 303 46.2
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 2.2e-43 180.3 250 48.4
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 8.3e-43 178.3 121 76.9
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 7.0e-42 175.3 309 42.4
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 2.0e-41 173.7 231 49.4
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 3.0e-40 169.9 248 45.6
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 5.6e-39 165.6 299 39.5
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 2.1e-38 163.7 291 46.4
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 5.2e-37 159.1 291 46.0
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 2.0e-36 157.1 243 44.9
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 6.4e-35 152.1 303 39.3
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 7.8e-33 145.2 289 48.1
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 1.3e-32 144.4 302 36.8
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 1.7e-32 144.1 296 39.9
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 2.5e-31 140.2 193 49.2
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 3.6e-30 136.3 298 36.9
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 3.1e-29 133.3 295 38.0
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 2.6e-28 130.2 136 57.4
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 1.9e-23 114.0 74 75.7
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 4.3e-23 112.8 220 41.4
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 1.1e-21 108.2 216 44.0
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 8.9e-21 105.1 75 73.3
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 1.9e-18 97.4 221 37.6
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 5.1e-16 89.4 201 45.8
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 4.8e-14 82.8 228 41.7
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 6.2e-14 82.4 134 42.5
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 3.1e-13 80.1 247 30.8
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 9.9e-12 75.1 228 29.8
C07p45690 Brassica napus HOM05D005104 ORTHO05D021970 1.6e-09 67.8 142 39.4
C09p03790 Brassica napus HOM05D005104 ORTHO05D006614 1.6e-09 67.8 138 39.1
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 4.6e-09 66.2 142 38.7
C05p26840 Brassica napus HOM05D005104 ORTHO05D006614 1.1e-07 61.6 126 38.9
Potri.001G206032 Populus trichocarpa HOM05D005104 ORTHO05D006614 1.9e-07 60.8 221 38.5
C03p52730 Brassica napus HOM05D005104 ORTHO05D021970 5.6e-07 59.3 151 34.4


User provided reference genes

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