Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 7.2e-286 986.5 478 100.0
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 2.1e-229 798.9 452 83.6
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 9.6e-222 773.5 448 82.8
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 3.8e-218 761.5 465 83.0
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 5.5e-209 731.1 448 77.5
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 1.8e-204 716.1 431 77.7
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 6.9e-204 714.1 447 75.6
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 2.6e-203 712.2 448 75.7
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 7.7e-203 710.7 451 74.5
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 8.5e-202 707.2 429 78.1
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 3.9e-199 698.4 434 75.8
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 5.1e-199 698.0 458 73.1
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 1.1e-198 696.8 447 74.3
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 1.5e-198 696.4 447 74.0
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 7.4e-198 694.1 439 75.2
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 1.3e-197 693.3 448 74.1
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 1.7e-197 693.0 501 69.3
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 8.2e-197 690.6 429 76.2
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.4e-196 689.9 448 72.5
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 1.8e-196 689.5 428 75.2
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 3.1e-196 688.7 448 73.4
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 5.3e-196 688.0 439 74.3
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 7.0e-196 687.6 428 75.0
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 1.2e-195 686.8 448 73.4
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 1.2e-195 686.8 448 73.0
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 3.5e-195 685.3 430 73.7
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 4.5e-195 684.9 448 73.0
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 5.9e-195 684.5 430 73.7
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 7.7e-195 684.1 433 75.8
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 1.3e-194 683.3 456 72.4
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.2e-194 682.6 433 75.3
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 5.0e-194 681.4 449 71.5
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 5.0e-194 681.4 448 73.2
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 8.5e-194 680.6 429 74.4
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 8.5e-194 680.6 430 74.4
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.9e-193 679.5 430 74.7
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 1.9e-193 679.5 439 73.1
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 7.2e-193 677.6 430 73.0
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 7.2e-193 677.6 438 74.9
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 1.2e-192 676.8 423 75.2
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 4.7e-192 674.9 450 72.4
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 1.0e-191 673.7 444 72.7
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 1.8e-191 672.9 431 73.1
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 4.0e-191 671.8 430 72.8
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 5.2e-191 671.4 430 74.4
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 6.7e-191 671.0 451 72.7
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 1.4e-188 663.3 460 68.7
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 1.6e-187 659.8 461 71.6
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 1.0e-186 657.1 431 72.9
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 1.0e-186 657.1 451 69.8
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 4.2e-185 651.7 436 70.4
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 7.2e-185 651.0 429 72.5
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 9.4e-185 650.6 436 70.4
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 1.6e-184 649.8 438 70.3
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 6.1e-184 647.9 385 77.9
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 8.0e-184 647.5 425 71.1
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 1.0e-183 647.1 434 70.0
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 1.8e-183 646.4 415 71.6
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.3e-183 646.0 434 69.8
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 8.8e-183 644.0 446 69.7
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 4.8e-181 638.3 390 75.6
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 4.8e-181 638.3 364 81.0
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 6.3e-181 637.9 425 70.8
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 1.1e-180 637.1 434 70.3
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 1.1e-180 637.1 434 70.3
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.1e-180 637.1 442 69.9
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 1.4e-180 636.7 459 67.1
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 1.8e-180 636.3 434 70.0
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 2.4e-180 636.0 444 69.6
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 4.1e-180 635.2 452 68.6
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 7.0e-180 634.4 388 75.5
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 1.2e-179 633.6 434 69.8
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 2.0e-179 632.9 386 74.9
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 1.0e-178 630.6 431 69.6
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 1.5e-177 626.7 386 75.4
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 1.5e-177 626.7 386 74.6
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 3.0e-175 619.0 428 67.8
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 6.8e-175 617.8 364 77.7
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 8.8e-175 617.5 465 65.2
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 2.8e-173 612.5 384 74.0
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 3.7e-173 612.1 386 72.0
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 3.1e-172 609.0 383 73.6
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 5.9e-171 604.7 433 66.7
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 7.7e-171 604.4 392 71.7
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 9.5e-169 597.4 464 64.7
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 6.1e-168 594.7 407 68.8
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 3.0e-162 575.9 375 72.0
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 5.6e-161 571.6 450 63.1
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 5.2e-159 565.1 436 62.8
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 9.8e-158 560.8 442 63.3
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 3.2e-156 555.8 437 61.1
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 4.6e-155 552.0 436 61.0
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.2e-152 543.9 331 76.4
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 4.9e-141 505.4 435 57.7
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 1.4e-140 503.8 378 63.2
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 4.4e-134 482.3 286 81.1
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 3.5e-123 446.0 435 53.6
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 5.1e-106 389.0 212 84.9
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 1.3e-98 364.4 454 43.6
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 1.1e-95 354.8 385 46.0
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 2.6e-94 350.1 259 68.0
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 5.0e-93 345.9 223 73.5
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 1.3e-88 331.3 435 42.3
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 9.1e-87 325.1 232 68.1
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 1.6e-78 297.7 319 51.1
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 1.7e-69 267.7 159 77.4
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 1.5e-68 264.6 230 59.6
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 8.0e-59 232.3 147 74.8
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.5e-44 184.9 128 68.0
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 3.6e-43 180.3 220 46.8
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 6.6e-29 132.9 123 52.8
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 2.3e-26 124.4 82 70.7
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 2.3e-26 124.4 73 76.7
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.2e-25 122.1 67 85.1
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.1e-20 105.5 114 51.8
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 1.1e-20 105.5 135 48.1
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 2.0e-17 94.7 102 49.0
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 7.6e-17 92.8 89 46.1
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 2.4e-07 61.2 68 52.9


User provided reference genes

Program Settings