Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19566 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 6.6e-82 307.4 162 100.0
Rhsim05G0167200 Rhododendron simsii HOM05D003590 ORTHO05D004290 6.0e-59 231.1 131 92.4
CSS0008581 Camellia sinensis var. sinensis HOM05D003590 ORTHO05D004290 1.0e-53 213.8 139 79.9
Dinv15385 Davidia involucrata HOM05D003590 ORTHO05D004290 1.3e-53 213.4 142 81.7
GSVIVG01019065001 Vitis vinifera HOM05D003590 ORTHO05D004290 2.2e-53 212.6 132 81.1
CSS0039108 Camellia sinensis var. sinensis HOM05D003590 ORTHO05D004290 5.0e-53 211.5 139 79.1
Dinv29086 Davidia involucrata HOM05D003590 ORTHO05D004290 6.5e-53 211.1 147 77.6
Migut.F01864 Erythranthe guttata HOM05D003590 ORTHO05D004290 1.4e-52 209.9 132 79.5
Peaxi162Scf00074g01833 Petunia axillaris HOM05D003590 ORTHO05D004290 1.9e-52 209.5 146 74.7
TAR362G0082 Trochodendron aralioides HOM05D003590 ORTHO05D004290 4.2e-52 208.4 132 79.5
Nitab4.5_0004390g0060 Nicotiana tabacum HOM05D003590 ORTHO05D004290 9.3e-52 207.2 132 78.8
Hma1.2p1_0831F.1_g225440 Hydrangea macrophylla HOM05D003590 ORTHO05D004290 1.2e-51 206.8 141 75.9
TWI36G1101 Tripterygium wilfordii HOM05D003590 ORTHO05D004290 1.6e-51 206.5 131 80.9
CSS0013807 Camellia sinensis var. sinensis HOM05D003590 ORTHO05D004290 2.1e-51 206.1 138 76.8
Eucgr.B01427 Eucalyptus grandis HOM05D003590 ORTHO05D004290 7.9e-51 204.1 139 77.0
Oeu064494.2 Olea europaea HOM05D003590 ORTHO05D004290 1.0e-50 203.8 133 77.4
Eucgr.K00001 Eucalyptus grandis HOM05D003590 ORTHO05D004290 2.3e-50 202.6 127 81.9
PGSC0003DMG400016231 Solanum tuberosum HOM05D003590 ORTHO05D004290 3.0e-50 202.2 127 78.7
Solyc11g008990.2 Solanum lycopersicum HOM05D003590 ORTHO05D004290 5.1e-50 201.4 127 78.7
Sopen11g004770 Solanum pennellii HOM05D003590 ORTHO05D004290 5.1e-50 201.4 127 78.7
CAN.G1177.3 Capsicum annuum HOM05D003590 ORTHO05D004290 6.7e-50 201.1 127 81.1
AUR62006641 Chenopodium quinoa HOM05D003590 ORTHO05D004290 8.7e-50 200.7 132 78.8
Cc09_g03870 Coffea canephora HOM05D003590 ORTHO05D004290 1.1e-49 200.3 132 78.8
Ah.06g195400 Amaranthus hybridus HOM05D003590 ORTHO05D004290 1.5e-49 199.9 127 79.5
Sc06g0005010 Simmondsia chinensis HOM05D003590 ORTHO05D004290 1.5e-49 199.9 138 76.1
Lj1A579G41 Lonicera japonica HOM05D003590 ORTHO05D004290 5.7e-49 198.0 127 80.3
EL10Ac4g10000 Beta vulgaris HOM05D003590 ORTHO05D004290 7.4e-49 197.6 127 79.5
MSTRG.8205 Avicennia marina HOM05D003590 ORTHO05D004290 4.8e-48 194.9 128 79.7
CDE08G0825 Ceratophyllum demersum HOM05D003590 ORTHO05D004290 6.3e-48 194.5 127 80.3
SalBow6G6444 Salvia bowleyana HOM05D003590 ORTHO05D004290 6.3e-48 194.5 128 77.3
arahy.Tifrunner.gnm1.ann1.SY3MF3 Arachis hypogaea HOM05D003590 ORTHO05D004290 8.2e-48 194.1 145 70.3
arahy.Tifrunner.gnm1.ann1.YL8857 Arachis hypogaea HOM05D003590 ORTHO05D004290 8.2e-48 194.1 145 70.3
Potri.006G123600 Populus trichocarpa HOM05D003590 ORTHO05D004290 1.4e-47 193.4 131 76.3
PGR119G1440 Punica granatum HOM05D003590 ORTHO05D004290 1.4e-47 193.4 133 75.9
THA.LOC104805702 Tarenaya hassleriana HOM05D003590 ORTHO05D004290 1.8e-47 193.0 146 68.5
Actinidia03270 Actinidia chinensis HOM05D003590 ORTHO05D004290 4.1e-47 191.8 127 81.9
Phvul.008G052900 Phaseolus vulgaris HOM05D003590 ORTHO05D004290 5.3e-47 191.4 145 69.7
Glyma.18G243700 Glycine max HOM05D003590 ORTHO05D004290 9.0e-47 190.7 145 69.0
Sabra06G0097800 Salix brachista HOM05D003590 ORTHO05D004290 1.5e-46 189.9 131 74.8
CANSAT54G1837 Cannabis sativa HOM05D003590 ORTHO05D004290 2.0e-46 189.5 147 72.8
MBI07_g22611_MAGBIO Magnolia biondii HOM05D003590 ORTHO05D004290 1.0e-45 187.2 127 76.4
MBI17_g21475_MAGBIO Magnolia biondii HOM05D003590 ORTHO05D004290 1.7e-45 186.4 136 75.0
Nn7g37627 Nelumbo nucifera HOM05D003590 ORTHO05D004290 1.7e-45 186.4 142 71.8
Duzib151G0409 Durio zibethinus HOM05D003590 ORTHO05D004290 2.9e-45 185.7 138 73.2
QL10p052769 Quercus lobata HOM05D003590 ORTHO05D004290 2.9e-45 185.7 125 77.6
SGA_v2.0_scaffold122G33190 Striga asiatica HOM05D003590 ORTHO05D004290 3.8e-45 185.3 130 76.2
Ciclev10021047m.g Citrus clementina HOM05D003590 ORTHO05D004290 5.0e-45 184.9 127 75.6
Potri.016G099400 Populus trichocarpa HOM05D003590 ORTHO05D004290 5.0e-45 184.9 131 74.0
DCAR_002151 Daucus carota HOM05D003590 ORTHO05D004290 8.5e-45 184.1 127 77.2
Lj1g0027383 Lotus japonicus HOM05D003590 ORTHO05D004290 1.1e-44 183.7 140 71.4
AL2G20260 Arabidopsis lyrata HOM05D003590 ORTHO05D004290 1.4e-44 183.3 133 70.7
Carub.0006s2551 Capsella rubella HOM05D003590 ORTHO05D004290 1.9e-44 183.0 133 69.2
Manes.11G128000 Manihot esculenta HOM05D003590 ORTHO05D004290 1.9e-44 183.0 125 74.4
Hund07359 Selenicereus undatus HOM05D003590 ORTHO05D004290 1.9e-44 183.0 127 76.4
FAN15G3511 Fragaria x ananassa HOM05D003590 ORTHO05D004290 2.5e-44 182.6 132 72.0
HanXRQChr16g0500391 Helianthus annuus HOM05D003590 ORTHO05D004290 2.5e-44 182.6 147 66.0
Aa31LG2G2380 Aethionema arabicum HOM05D003590 ORTHO05D004290 3.2e-44 182.2 141 66.0
AT1G65260 Arabidopsis thaliana HOM05D003590 ORTHO05D004290 3.2e-44 182.2 143 67.8
Dinv33190 Davidia involucrata HOM05D003590 ORTHO05D004290 4.2e-44 181.8 132 72.0
CiPaw.02G102900 Carya illinoinensis HOM05D003590 ORTHO05D004290 5.5e-44 181.4 125 76.8
Duzib268G1650 Durio zibethinus HOM05D003590 ORTHO05D004290 5.5e-44 181.4 138 71.7
Manes.04G049785 Manihot esculenta HOM05D003590 ORTHO05D004290 5.5e-44 181.4 125 73.6
RcHm_v2.0_Chr6g0285711 Rosa chinensis HOM05D003590 ORTHO05D004290 5.5e-44 181.4 132 72.0
HPP92_009006 Vanilla planifolia HOM05D003590 ORTHO05D004290 5.5e-44 181.4 153 64.1
MD17G1177400 Malus domestica HOM05D003590 ORTHO05D004290 7.2e-44 181.0 147 68.0
VMungo1383G1305 Vigna mungo HOM05D003590 ORTHO05D004290 7.2e-44 181.0 131 74.0
FAN24G1875 Fragaria x ananassa HOM05D003590 ORTHO05D004290 9.4e-44 180.6 132 71.2
Eucgr.A00018 Eucalyptus grandis HOM05D003590 ORTHO05D004290 1.6e-43 179.9 147 66.0
PSO339G4307 Papaver somniferum HOM05D003590 ORTHO05D004290 1.6e-43 179.9 127 77.2
PSO384G2196 Papaver somniferum HOM05D003590 ORTHO05D004290 1.6e-43 179.9 127 77.2
Thecc.04G169500 Theobroma cacao HOM05D003590 ORTHO05D004290 1.6e-43 179.9 138 71.0
COL.COLO4_10136 Corchorus olitorius HOM05D003590 ORTHO05D004290 2.1e-43 179.5 137 70.1
HanXRQChr05g0149811 Helianthus annuus HOM05D003590 ORTHO05D004290 2.1e-43 179.5 132 70.5
Phvul.008G099200 Phaseolus vulgaris HOM05D003590 ORTHO05D004290 2.1e-43 179.5 144 68.1
Prupe.1G203200 Prunus persica HOM05D003590 ORTHO05D004290 2.1e-43 179.5 127 72.4
Cfa015230 Carpinus fangiana HOM05D003590 ORTHO05D004290 2.7e-43 179.1 125 75.2
FvH4_2g19990 Fragaria vesca HOM05D003590 ORTHO05D004290 2.7e-43 179.1 132 70.5
Sabra16G0098800 Salix brachista HOM05D003590 ORTHO05D004290 2.7e-43 179.1 131 74.0
SGA_v2.0_scaffold62G21494 Striga asiatica HOM05D004200 ORTHO05D004996 2.7e-43 179.1 127 72.4
FAN27G0950 Fragaria x ananassa HOM05D003590 ORTHO05D004290 4.6e-43 178.3 132 70.5
BcaB05g24099 Brassica carinata HOM05D003590 ORTHO05D004290 6.1e-43 177.9 145 64.1
Psat7g208480 Pisum sativum HOM05D003590 ORTHO05D004290 6.1e-43 177.9 130 73.1
CARHR056900 Cardamine hirsuta HOM05D003590 ORTHO05D004290 7.9e-43 177.6 144 66.0
Glyma.11G124800 Glycine max HOM05D003590 ORTHO05D004290 1.0e-42 177.2 130 72.3
Rhsim09G0012200 Rhododendron simsii HOM05D003590 ORTHO05D004290 1.0e-42 177.2 141 68.1
Lsat_1_v5_gn_9_37260 Lactuca sativa HOM05D003590 ORTHO05D004290 1.4e-42 176.8 132 72.7
BcaC03g14688 Brassica carinata HOM05D003590 ORTHO05D004290 1.8e-42 176.4 143 65.0
Thhalv10018833m.g Eutrema salsugineum HOM05D003590 ORTHO05D004290 1.8e-42 176.4 127 70.1
CiPaw.01G172800 Carya illinoinensis HOM05D003590 ORTHO05D004290 2.3e-42 176.0 124 75.0
Glyma.12G049400 Glycine max HOM05D003590 ORTHO05D004290 2.3e-42 176.0 130 72.3
Gohir.A02G091600 Gossypium hirsutum HOM05D003590 ORTHO05D004290 2.3e-42 176.0 138 70.3
Aqoxy2G04149 Aquilegia oxysepala HOM05D003590 ORTHO05D004290 3.0e-42 175.6 142 66.9
Gohir.D10G124700 Gossypium hirsutum HOM05D003590 ORTHO05D004290 3.0e-42 175.6 138 70.3
Gorai.011G137800 Gossypium raimondii HOM05D003590 ORTHO05D004290 3.0e-42 175.6 138 70.3
Medtr4g068210 Medicago truncatula HOM05D003590 ORTHO05D004290 3.0e-42 175.6 149 64.4
RcHm_v2.0_Chr2g0122441 Rosa chinensis HOM05D003590 ORTHO05D004290 3.0e-42 175.6 132 69.7
A02p13120 Brassica napus HOM05D003590 ORTHO05D004290 3.9e-42 175.3 127 70.1
C02p21260 Brassica napus HOM05D003590 ORTHO05D004290 3.9e-42 175.3 127 70.1
Zm00001eb365760 Zea mays HOM05D003590 ORTHO05D004290 3.9e-42 175.3 149 65.8
Atru.chr4.1363 Acer truncatum HOM05D003590 ORTHO05D004290 5.1e-42 174.9 132 70.5
BraA02t06368Z Brassica rapa HOM05D003590 ORTHO05D004290 5.1e-42 174.9 127 70.1
Gohir.A10G141800 Gossypium hirsutum HOM05D003590 ORTHO05D004290 5.1e-42 174.9 138 70.3
MD00G1019200 Malus domestica HOM05D003590 ORTHO05D004290 5.1e-42 174.9 126 71.4
BolC2t08266H Brassica oleracea HOM05D003590 ORTHO05D004290 6.7e-42 174.5 127 70.1
Gorai.005G124600 Gossypium raimondii HOM05D003590 ORTHO05D004290 6.7e-42 174.5 146 69.2
Oeu010166.1 Olea europaea HOM05D003590 ORTHO05D004290 6.7e-42 174.5 98 91.8
Sp5g19930 Schrenkiella parvula HOM05D003590 ORTHO05D004290 6.7e-42 174.5 127 69.3
Os01g0895100 Oryza sativa ssp. japonica HOM05D003590 ORTHO05D004290 1.1e-41 173.7 131 70.2
PGR042G3827 Punica granatum HOM05D003590 ORTHO05D004290 1.5e-41 173.3 148 64.9
ATR0743G202 Amborella trichopoda HOM05D003590 ORTHO05D004290 2.5e-41 172.6 130 71.5
Ca_20810_v3 Cicer arietinum L. HOM05D003590 ORTHO05D004290 2.5e-41 172.6 129 72.1
ClCG07G015120 Citrullus lanatus HOM05D003590 ORTHO05D004290 2.5e-41 172.6 133 70.7
Gohir.D02G109000 Gossypium hirsutum HOM05D003590 ORTHO05D004290 2.5e-41 172.6 139 71.2
Lsat_1_v5_gn_8_26121 Lactuca sativa HOM05D003590 ORTHO05D004290 2.5e-41 172.6 132 70.5
Hund21913 Selenicereus undatus HOM05D003590 ORTHO05D004290 3.3e-41 172.2 132 72.0
Lalb_Chr19g0138461 Lupinus albus HOM05D003590 ORTHO05D004290 4.3e-41 171.8 111 79.3
FAN26G3423 Fragaria x ananassa HOM05D003590 ORTHO05D004290 7.4e-41 171.0 131 68.7
Lj3g0023284 Lotus japonicus HOM05D003590 ORTHO05D004290 7.4e-41 171.0 130 70.0
Duzib212G0521 Durio zibethinus HOM05D003590 ORTHO05D004290 9.7e-41 170.6 139 66.2
CsaV3_4G002670 Cucumis sativus L. HOM05D003590 ORTHO05D004290 1.3e-40 170.2 124 72.6
Zm00001eb144840 Zea mays HOM05D003590 ORTHO05D004290 1.3e-40 170.2 142 65.5
Actinidia27105 Actinidia chinensis HOM05D003590 ORTHO05D004290 1.7e-40 169.9 133 67.7
CANSAT64G0301 Cannabis sativa HOM05D003590 ORTHO05D004290 1.7e-40 169.9 132 67.4
MELO3C017774.2 Cucumis melo HOM05D003590 ORTHO05D004290 1.7e-40 169.9 124 72.6
Sed0008844 Sechium edule HOM05D003590 ORTHO05D004290 1.7e-40 169.9 108 78.7
Sed0014148 Sechium edule HOM05D003590 ORTHO05D004290 1.7e-40 169.9 108 78.7
TPR.G34214 Trifolium pratense HOM05D003590 ORTHO05D004290 1.7e-40 169.9 146 65.1
Haze_01407 Corylus avellana HOM05D003590 ORTHO05D004290 2.2e-40 169.5 98 87.8
Lalb_Chr07g0192831 Lupinus albus HOM05D003590 ORTHO05D004290 6.3e-40 167.9 106 81.1
Cpa.g.sc123.34 Carica papaya HOM05D003590 ORTHO05D004290 1.1e-39 167.2 135 69.6
DCAR_023942 Daucus carota HOM05D003590 ORTHO05D004290 1.1e-39 167.2 117 72.6
vmacro00650 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 1.1e-39 167.2 132 67.4
vmacro00679 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 1.1e-39 167.2 132 67.4
FvH4_6g53380 Fragaria vesca HOM05D003590 ORTHO05D004290 2.4e-39 166.0 132 65.9
Nn1g09673 Nelumbo nucifera HOM05D003590 ORTHO05D004290 3.1e-39 165.6 122 73.0
unitig_52.g17513 Utricularia gibba HOM05D003590 ORTHO05D004290 9.1e-39 164.1 127 66.1
GSVIVG01038103001 Vitis vinifera HOM05D003590 ORTHO05D004290 3.4e-38 162.2 103 81.6
Lj3A152T20 Lonicera japonica HOM05D003590 ORTHO05D004290 7.7e-38 161.0 103 79.6
FAN19G0667 Fragaria x ananassa HOM05D003590 ORTHO05D004290 1.0e-37 160.6 141 63.8
PSO478G1249 Papaver somniferum HOM05D003590 ORTHO05D004290 1.7e-37 159.8 133 66.9
PSO782G1591 Papaver somniferum HOM05D003590 ORTHO05D004290 2.9e-37 159.1 151 60.9
Mapoly0058s0048 Marchantia polymorpha HOM05D003590 ORTHO05D004290 6.1e-35 151.4 109 69.7
Pp3c2_28040 Physcomitrium patens HOM05D003590 ORTHO05D004290 7.9e-35 151.0 107 72.0
SHI32795 Sapria himalayana HOM05D003590 ORTHO05D004290 1.0e-34 150.6 163 54.0
MD15G1434500 Malus domestica HOM05D003590 ORTHO05D004290 1.8e-34 149.8 93 79.6
SEGI_22814 Sequoiadendron giganteum HOM05D003590 ORTHO05D004290 2.3e-34 149.4 104 73.1
Pp3c7_13570 Physcomitrium patens HOM05D003590 ORTHO05D004290 3.3e-33 145.6 107 70.1
FvH4_3g16870 Fragaria vesca HOM05D003590 ORTHO05D004290 4.4e-33 145.2 132 60.6
Cpa.g.sc9.339 Carica papaya HOM05D003590 ORTHO05D004290 1.1e-31 140.6 131 61.1
AagrBONN_evm.TU.Sc2ySwM_228.379 Anthoceros agrestis HOM05D003590 ORTHO05D004290 1.4e-31 140.2 100 71.0
SMO115G0200 Selaginella moellendorffii HOM05D003590 ORTHO05D004290 3.5e-30 135.6 98 70.4
CBR_g79424 Chara braunii HOM05D003590 ORTHO05D004290 2.9e-29 132.5 95 69.5
Nitab4.5_0009796g0040 Nicotiana tabacum HOM05D003590 ORTHO05D004290 2.9e-29 132.5 80 87.5
PRCOL_00001168 Prasinoderma coloniale HOM05D003590 ORTHO05D004290 8.5e-29 131.0 95 67.4
RcHm_v2.0_Chr5g0028111 Rosa chinensis HOM05D003590 ORTHO05D004290 1.5e-28 130.2 132 56.1
Pp3c10_14840 Physcomitrium patens HOM05D003590 ORTHO05D004290 2.3e-26 122.9 117 55.6
ECA246G3922 Erigeron canadensis HOM05D003590 ORTHO05D004290 5.2e-26 121.7 87 71.3
MCO10G215 Micromonas commoda HOM05D003590 ORTHO05D004290 1.1e-25 120.6 93 65.6
Cre13.g583550 Chlamydomonas reinhardtii HOM05D003590 ORTHO05D004290 2.6e-25 119.4 99 60.6
QL11p022255 Quercus lobata HOM05D003590 ORTHO05D004290 2.7e-22 109.4 63 90.5
Cre11.g468050 Chlamydomonas reinhardtii HOM05D003590 ORTHO05D004290 3.5e-22 109.0 94 56.4
ECA246G2345 Erigeron canadensis HOM05D003590 ORTHO05D004290 5.9e-22 108.2 68 80.9
AagrBONN_evm.TU.Sc2ySwM_228.2375 Anthoceros agrestis HOM05D003590 ORTHO05D004290 1.3e-21 107.1 102 53.9
AL2G21120 Arabidopsis lyrata HOM05D003590 ORTHO05D004290 3.8e-21 105.5 94 60.6
AL2G21940 Arabidopsis lyrata HOM05D003590 ORTHO05D004290 1.5e-20 103.6 79 65.8
Lj4g0013306 Lotus japonicus HOM05D003590 ORTHO05D004290 4.2e-20 102.1 68 76.5
CBR_g16972 Chara braunii HOM05D003590 ORTHO05D004290 2.1e-19 99.8 96 49.0
FAN19G0592 Fragaria x ananassa HOM05D003590 ORTHO05D004290 9.8e-17 90.9 76 61.8
EL10Ac4g08485 Beta vulgaris HOM05D003590 ORTHO05D004290 4.8e-16 88.6 60 75.0
EL10Ac4g08487 Beta vulgaris HOM05D003590 ORTHO05D004290 4.8e-16 88.6 60 75.0
Lsat_1_v5_gn_1_99340 Lactuca sativa HOM05D003590 ORTHO05D004290 2.5e-12 76.3 55 70.9
FAN11G2382 Fragaria x ananassa HOM05D003590 ORTHO05D004290 1.6e-11 73.6 68 60.3
FAN16G0742 Fragaria x ananassa HOM05D003590 ORTHO05D004290 1.6e-11 73.6 68 60.3
Ca_29066_v3 Cicer arietinum L. HOM05D003590 ORTHO05D147848 1.8e-10 70.1 91 38.5


User provided reference genes

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