Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 8.7e-50 200.3 124 100.0
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 1.7e-37 159.5 125 72.0
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 2.5e-36 155.6 122 71.3
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 9.4e-36 153.7 130 69.2
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 5.1e-34 147.9 122 69.7
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 4.1e-31 138.3 88 86.4
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 5.3e-31 137.9 87 81.6
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 2.6e-30 135.6 99 74.7
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 1.7e-29 132.9 87 80.5
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 2.2e-29 132.5 86 79.1
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 2.2e-29 132.5 88 78.4
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 2.9e-29 132.1 88 80.7
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 3.8e-29 131.7 96 72.9
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 1.1e-28 130.2 82 80.5
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 1.1e-28 130.2 82 80.5
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 9.4e-28 127.1 87 74.7
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 2.1e-27 125.9 89 71.9
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 2.1e-27 125.9 85 74.1
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 2.7e-27 125.6 86 76.7
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 2.7e-27 125.6 91 74.7
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 3.6e-27 125.2 85 76.5
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 3.6e-27 125.2 97 67.0
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 4.7e-27 124.8 85 76.5
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 4.7e-27 124.8 85 72.9
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 6.1e-27 124.4 87 71.3
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 8.0e-27 124.0 86 70.9
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 8.0e-27 124.0 92 69.6
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 1.4e-26 123.2 87 72.4
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 1.8e-26 122.9 85 77.6
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 1.8e-26 122.9 123 55.3
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.8e-26 122.9 87 71.3
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 2.3e-26 122.5 94 69.1
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 2.3e-26 122.5 87 71.3
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 4.0e-26 121.7 90 70.0
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 5.2e-26 121.3 88 67.0
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 5.2e-26 121.3 89 74.2
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 6.7e-26 120.9 89 67.4
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 6.7e-26 120.9 87 70.1
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 8.8e-26 120.6 93 71.0
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 8.8e-26 120.6 87 70.1
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 1.5e-25 119.8 89 66.3
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 1.5e-25 119.8 91 69.2
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 1.5e-25 119.8 86 73.3
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 2.0e-25 119.4 84 76.2
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 2.0e-25 119.4 91 72.5
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 2.0e-25 119.4 89 76.4
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 4.4e-25 118.2 85 76.5
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 5.7e-25 117.9 98 65.3
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 7.5e-25 117.5 85 72.9
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 1.7e-24 116.3 102 64.7
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 1.7e-24 116.3 85 76.5
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 3.7e-24 115.2 107 61.7
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 4.8e-24 114.8 141 50.4
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 8.2e-24 114.0 98 68.4
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 1.1e-23 113.6 107 60.7
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 1.4e-23 113.2 97 64.9
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 1.4e-23 113.2 94 67.0
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 2.4e-23 112.5 92 68.5
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 9.1e-23 110.5 100 62.0
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 1.2e-22 110.2 91 68.1
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 1.2e-22 110.2 88 67.0
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 1.2e-22 110.2 88 67.0
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 1.6e-22 109.8 84 72.6
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 1.6e-22 109.8 85 71.8
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 2.7e-22 109.0 88 65.9
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 2.7e-22 109.0 97 67.0
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 1.0e-21 107.1 88 64.8
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 1.3e-21 106.7 97 64.9
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 1.7e-21 106.3 73 74.0
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 8.5e-21 104.0 92 62.0
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 1.1e-20 103.6 70 77.1
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 1.1e-20 103.6 82 59.8
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 1.9e-20 102.8 88 62.5
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 3.2e-20 102.1 93 63.4
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 3.2e-20 102.1 93 63.4
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 4.2e-20 101.7 65 83.1
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 4.2e-20 101.7 65 83.1
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 4.2e-20 101.7 65 83.1
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 4.2e-20 101.7 65 83.1
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 5.5e-20 101.3 67 77.6
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 7.2e-20 100.9 60 80.0
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 9.4e-20 100.5 65 81.5
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.2e-19 100.1 73 69.9
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 1.6e-19 99.8 89 62.9
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 2.7e-19 99.0 86 65.1
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.7e-19 99.0 76 65.8
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 2.7e-19 99.0 59 81.4
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 8.8e-18 94.0 76 65.8
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 5.7e-17 91.3 63 73.0
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 1.4e-15 86.7 81 60.5
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 1.8e-15 86.3 94 57.4
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 7.0e-15 84.3 89 51.7
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 7.0e-15 84.3 58 74.1
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 5.5e-12 74.7 73 52.1
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 3.0e-10 68.9 106 42.5
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 4.4e-09 65.1 46 71.7
Cre02.g086100 Chlamydomonas reinhardtii HOM05D007571 ORTHO05D009439 3.5e-06 55.5 74 45.9
SMO117G0287 Selaginella moellendorffii HOM05D028851 ORTHO05D009439 7.7e-06 54.3 40 62.5


User provided reference genes

Program Settings