Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 1.5e-202 709.5 417 100.0
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 8.1e-116 421.4 392 74.0
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 1.1e-88 331.3 402 51.5
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 2.7e-79 300.1 393 49.4
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 4.5e-74 282.7 402 47.3
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 2.4e-67 260.4 403 44.2
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 1.2e-66 258.1 427 43.1
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.3e-62 243.8 394 41.4
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 1.5e-61 241.1 399 44.9
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 3.3e-61 240.0 403 43.7
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 7.0e-59 232.3 404 41.1
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 7.0e-59 232.3 409 41.3
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 9.1e-59 231.9 409 41.3
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 2.0e-58 230.7 412 41.0
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 2.2e-57 227.3 407 41.0
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 3.6e-55 219.9 404 39.6
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 4.7e-55 219.5 403 39.5
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 1.4e-54 218.0 392 41.8
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 3.4e-53 213.4 428 39.5
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 2.2e-52 210.7 414 38.9
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 2.2e-52 210.7 411 38.7
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 3.7e-52 209.9 406 39.9
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 3.7e-52 209.9 416 40.6
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 8.3e-52 208.8 402 40.8
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 4.1e-51 206.5 404 38.4
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 2.7e-50 203.8 400 38.8
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 5.0e-49 199.5 404 38.6
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 2.5e-48 197.2 407 37.1
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 2.5e-48 197.2 395 38.5
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 3.2e-48 196.8 393 39.7
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 1.2e-47 194.9 403 37.7
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 2.3e-46 190.7 407 39.1
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 3.7e-44 183.3 393 36.1
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.1e-43 181.8 416 35.8
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 1.4e-43 181.4 333 38.7
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 3.1e-43 180.3 398 38.2
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.7e-42 177.2 403 37.7
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 5.9e-42 176.0 409 36.4
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 2.3e-41 174.1 409 35.2
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 2.3e-41 174.1 394 35.3
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 4.3e-40 169.9 403 35.7
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 1.2e-39 168.3 411 37.5
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 4.7e-39 166.4 415 37.1
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 3.0e-38 163.7 415 34.5
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 4.0e-38 163.3 404 36.4
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 4.0e-38 163.3 404 36.4
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 4.0e-38 163.3 398 35.9
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 5.2e-38 162.9 403 34.5
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 2.6e-37 160.6 413 33.9
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 1.3e-36 158.3 413 36.1
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 1.4e-35 154.8 415 33.0
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 3.2e-35 153.7 415 32.8
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 7.0e-35 152.5 402 34.3
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 7.0e-35 152.5 394 34.5
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 1.6e-34 151.4 200 49.0
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 7.8e-34 149.1 404 35.4
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 1.7e-33 147.9 393 33.1
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 6.6e-33 146.0 193 52.3
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.1e-32 145.2 201 47.3
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 1.1e-32 145.2 207 48.3
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 4.7e-31 139.8 172 47.1
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 6.2e-31 139.4 372 34.7
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 8.0e-31 139.0 373 34.0
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 8.0e-31 139.0 196 48.0
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 1.1e-30 138.7 236 43.2
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 1.8e-30 137.9 203 46.3
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.8e-30 137.9 396 33.8
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 2.3e-30 137.5 411 33.1
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 3.1e-30 137.1 150 51.3
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 3.1e-30 137.1 183 47.0
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 6.8e-30 136.0 200 46.0
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.2e-29 135.2 196 46.9
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 5.8e-29 132.9 203 44.3
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 5.8e-29 132.9 199 44.7
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 7.5e-29 132.5 203 46.3
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 9.8e-29 132.1 202 43.1
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 1.7e-28 131.3 417 32.6
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 2.2e-28 131.0 216 42.1
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 4.1e-27 126.7 408 32.6
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.6e-26 124.8 200 45.0
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 3.9e-25 120.2 398 31.7
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 5.0e-25 119.8 197 43.7
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 8.6e-25 119.0 202 42.1
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 1.1e-24 118.6 205 43.9
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.5e-24 118.2 204 42.2
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 5.6e-24 116.3 208 42.3
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 8.1e-23 112.5 203 41.9
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 1.4e-22 111.7 228 37.7
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 5.2e-22 109.8 169 43.2
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 6.8e-22 109.4 394 32.0
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 6.8e-22 109.4 200 43.5
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 3.4e-21 107.1 292 33.9
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 9.9e-21 105.5 407 28.5
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 8.3e-20 102.4 202 42.1
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 1.6e-18 98.2 398 30.7
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 2.7e-18 97.4 408 30.4
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 3.0e-17 94.0 204 40.2
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 8.6e-17 92.4 201 36.8
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 4.3e-16 90.1 405 28.6
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 9.5e-16 89.0 341 30.8
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 1.6e-15 88.2 405 29.1
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 1.6e-15 88.2 155 40.6
Dinv15805 Davidia involucrata HOM05D006273 ORTHO05D007607 3.6e-15 87.0 240 35.0
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 3.6e-15 87.0 422 30.3
Actinidia00372 Actinidia chinensis HOM05D006273 ORTHO05D007607 2.4e-14 84.3 82 59.8
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 4.0e-14 83.6 205 33.2
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 5.2e-14 83.2 198 33.3
MBI19_g46225_MAGBIO Magnolia biondii HOM05D006273 ORTHO05D015157 1.2e-13 82.0 75 61.3
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 2.0e-13 81.3 215 35.3
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 5.8e-13 79.7 230 33.5
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 5.8e-13 79.7 204 35.3
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 9.9e-13 79.0 232 31.5
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 4.9e-12 76.6 204 33.8
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 1.1e-11 75.5 55 69.1
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 1.1e-11 75.5 407 27.0
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 2.4e-11 74.3 174 34.5
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 9.2e-11 72.4 406 28.6
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 3.5e-10 70.5 401 26.7
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 1.3e-09 68.6 144 43.1
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 1.3e-09 68.6 394 27.4
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 6.6e-09 66.2 200 35.0
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 3.1e-06 57.4 121 36.4
TAR362G0484 Trochodendron aralioides HOM05D006273 ORTHO05D007607 4.0e-06 57.0 78 51.3
C01p44480 Brassica napus HOM05D006273 ORTHO05D007607 9.0e-06 55.8 60 58.3


User provided reference genes

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