Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 0.0e+00 1393.3 684 100.0
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 9.4e-312 1073.2 684 80.4
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 4.3e-292 1007.7 686 76.4
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 1.7e-291 1005.7 686 76.2
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 5.1e-285 984.2 667 75.3
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 3.3e-276 954.9 686 72.9
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 1.3e-275 953.0 685 72.4
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 2.0e-273 945.7 685 72.0
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 2.6e-273 945.3 685 72.1
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 6.5e-272 940.6 719 69.1
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 2.5e-271 938.7 685 71.5
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 3.2e-271 938.3 684 71.9
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 7.2e-271 937.2 684 71.8
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 2.7e-270 935.3 687 71.5
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 4.7e-270 934.5 686 70.7
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 2.3e-269 932.2 667 72.0
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 6.8e-269 930.6 680 71.2
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 9.7e-268 926.8 651 73.3
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 1.3e-267 926.4 684 70.0
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 1.3e-267 926.4 657 72.5
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 1.7e-267 926.0 689 69.7
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 3.7e-267 924.9 684 70.8
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 6.3e-267 924.1 684 70.8
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 1.8e-266 922.5 684 70.5
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 2.4e-266 922.2 682 70.1
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 2.4e-266 922.2 653 72.1
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 7.0e-266 920.6 686 69.2
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 7.0e-266 920.6 684 70.3
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 1.6e-265 919.5 686 69.2
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 1.6e-265 919.5 664 71.8
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 2.0e-265 919.1 686 69.1
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 2.7e-265 918.7 684 70.3
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 5.0e-264 914.4 679 71.7
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 6.5e-264 914.1 684 70.3
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 5.5e-263 911.0 684 68.7
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 5.5e-263 911.0 630 74.0
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 9.4e-263 910.2 684 70.8
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 1.2e-262 909.8 684 69.4
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 2.1e-262 909.1 684 69.6
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 2.7e-262 908.7 684 68.9
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 6.1e-262 907.5 660 71.2
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 8.0e-262 907.1 639 72.8
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 2.3e-261 905.6 697 68.4
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 5.2e-261 904.4 667 70.3
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 8.8e-261 903.7 625 74.1
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 1.2e-260 903.3 650 71.8
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 2.0e-260 902.5 684 68.4
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 2.6e-260 902.1 625 74.2
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 3.4e-260 901.7 624 74.0
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 9.8e-260 900.2 667 69.9
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 1.7e-259 899.4 653 70.6
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 2.8e-259 898.7 656 70.4
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 2.8e-259 898.7 689 66.5
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 3.7e-259 898.3 656 70.3
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 2.7e-257 892.1 684 68.3
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 3.5e-257 891.7 677 67.4
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 3.5e-257 891.7 676 69.1
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 5.9e-257 891.0 685 67.4
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 2.5e-255 885.6 683 67.5
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 3.3e-255 885.2 687 66.1
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 3.3e-255 885.2 697 67.4
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 9.5e-255 883.6 611 74.6
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 4.7e-254 881.3 638 70.4
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 8.0e-254 880.6 685 67.0
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 1.0e-253 880.2 663 67.9
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 3.0e-253 878.6 684 65.9
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 3.0e-253 878.6 650 68.0
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 3.0e-253 878.6 684 66.8
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 4.0e-253 878.2 624 72.8
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 8.9e-253 877.1 685 66.7
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 1.2e-252 876.7 691 64.7
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 4.4e-252 874.8 691 63.8
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 5.7e-252 874.4 688 65.3
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 9.8e-252 873.6 688 65.4
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 2.2e-251 872.5 686 65.2
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 2.2e-251 872.5 691 63.8
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 2.8e-251 872.1 655 67.0
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 3.7e-251 871.7 650 67.2
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 4.9e-251 871.3 690 64.5
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 4.9e-251 871.3 688 65.3
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 1.4e-250 869.8 686 64.9
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 4.1e-250 868.2 692 64.7
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 3.5e-249 865.1 624 71.2
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 7.8e-249 864.0 694 64.3
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 1.0e-248 863.6 692 64.0
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 1.7e-248 862.8 624 70.5
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 2.3e-248 862.4 702 64.5
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 2.1e-246 855.9 647 67.7
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 1.0e-245 853.6 684 65.6
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 8.9e-245 850.5 659 66.5
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 3.4e-244 848.6 500 84.6
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 1.4e-242 843.2 648 66.0
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 1.1e-239 833.6 494 84.0
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 5.8e-236 821.2 667 65.1
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 1.9e-234 816.2 692 61.3
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 9.2e-234 813.9 645 64.8
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 7.6e-228 794.3 572 71.0
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 7.6e-228 794.3 645 63.1
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 1.3e-227 793.5 647 63.1
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 3.5e-225 785.4 571 71.1
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 2.3e-224 782.7 624 66.7
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 1.1e-221 773.9 542 74.0
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 1.7e-219 766.5 571 67.4
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 3.2e-218 762.3 645 60.6
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 3.0e-216 755.7 546 72.3
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 2.1e-209 733.0 569 67.0
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 5.6e-207 724.9 647 59.7
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 6.0e-201 704.9 684 59.2
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 3.2e-194 682.6 645 55.3
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 9.3e-186 654.4 647 52.6
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 3.2e-178 629.4 569 59.8
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 6.7e-160 568.5 655 47.2
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 9.1e-157 558.1 630 48.3
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 1.1e-154 551.2 462 58.9
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 4.9e-142 509.2 623 45.3
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 2.8e-137 493.4 289 84.4
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 4.4e-135 486.1 418 62.0
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 1.3e-78 298.5 158 91.1
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 2.8e-73 280.8 357 43.7
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 2.5e-53 214.5 437 31.1
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 4.2e-45 187.2 208 51.9
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 1.7e-30 138.7 443 26.2
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 1.6e-28 132.1 83 77.1
CARHR242160 Cardamine hirsuta HOM05D006107 ORTHO05D007455 1.8e-24 118.6 122 50.8
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 1.7e-22 112.1 65 81.5
SEGI_09117 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 3.4e-18 97.8 105 48.6
QL11p035429 Quercus lobata HOM05D006107 ORTHO05D007455 4.4e-10 70.9 77 55.8
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 9.2e-08 63.2 30 93.3
MCO15G166 Micromonas commoda HOM05D003397 ORTHO05D004390 1.6e-07 62.4 439 22.6


User provided reference genes

Program Settings