Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 3.1e-156 555.1 277 100.0
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 3.9e-74 282.3 263 61.6
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 9.0e-71 271.2 284 57.7
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 2.5e-65 253.1 266 56.0
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 7.4e-65 251.5 280 53.2
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 1.3e-64 250.8 270 55.6
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 6.3e-64 248.4 204 62.7
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 8.2e-64 248.1 271 54.6
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 1.1e-63 247.7 204 63.2
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 3.1e-63 246.1 204 64.7
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 4.1e-63 245.7 204 64.2
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 6.9e-63 245.0 281 50.5
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 9.0e-63 244.6 214 61.2
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 1.2e-62 244.2 275 51.3
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 4.5e-62 242.3 270 53.3
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 4.5e-62 242.3 205 62.9
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 4.5e-62 242.3 271 52.0
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 7.6e-62 241.5 271 53.5
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 7.6e-62 241.5 249 54.6
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 1.7e-61 240.4 265 52.5
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 1.7e-61 240.4 191 65.4
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 1.7e-61 240.4 263 52.9
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 2.2e-61 240.0 272 51.8
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 2.2e-61 240.0 249 54.2
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 2.9e-61 239.6 209 62.2
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 2.9e-61 239.6 265 52.5
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 3.8e-61 239.2 260 54.6
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 5.0e-61 238.8 236 56.8
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 6.5e-61 238.4 271 50.9
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.1e-60 237.7 269 51.3
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 1.4e-60 237.3 212 60.8
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 1.9e-60 236.9 218 57.3
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 2.5e-60 236.5 213 59.2
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 2.5e-60 236.5 191 64.4
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 2.5e-60 236.5 218 58.3
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 4.2e-60 235.7 212 59.4
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 5.5e-60 235.3 209 60.8
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.6e-59 233.8 270 50.4
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.1e-59 233.4 273 49.8
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 2.7e-59 233.0 204 61.3
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 6.1e-59 231.9 271 51.7
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 1.0e-58 231.1 282 49.6
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 1.3e-58 230.7 267 49.4
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 1.3e-58 230.7 293 46.4
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 1.8e-58 230.3 205 60.0
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 3.0e-58 229.6 203 59.6
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 5.1e-58 228.8 266 49.6
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 5.1e-58 228.8 213 55.9
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 5.1e-58 228.8 275 49.5
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 6.7e-58 228.4 213 59.2
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 2.5e-57 226.5 204 58.3
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 2.5e-57 226.5 204 56.9
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 2.5e-57 226.5 266 51.9
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 3.3e-57 226.1 208 55.8
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 4.3e-57 225.7 208 56.2
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 9.7e-57 224.6 265 50.6
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 1.3e-56 224.2 218 54.6
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 1.3e-56 224.2 208 56.7
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 2.2e-56 223.4 213 54.0
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 6.3e-56 221.9 190 61.1
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 6.3e-56 221.9 264 49.6
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 6.3e-56 221.9 251 51.8
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 1.4e-55 220.7 255 50.2
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 1.8e-55 220.3 212 53.3
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 3.1e-55 219.5 222 52.3
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 3.1e-55 219.5 266 50.8
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 4.1e-55 219.2 205 54.6
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 4.1e-55 219.2 218 52.8
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 6.9e-55 218.4 222 51.4
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 1.2e-54 217.6 207 55.6
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 2.0e-54 216.9 238 48.7
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 2.0e-54 216.9 238 48.7
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 2.0e-54 216.9 266 45.5
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 3.4e-54 216.1 251 49.8
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 3.4e-54 216.1 206 55.3
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 3.4e-54 216.1 215 53.0
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 4.5e-54 215.7 207 58.5
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 4.5e-54 215.7 193 58.0
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 5.9e-54 215.3 239 48.1
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 7.7e-54 214.9 211 53.1
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.0e-53 214.5 241 47.7
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 1.3e-53 214.2 218 52.3
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 1.7e-53 213.8 207 53.1
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 1.7e-53 213.8 194 55.7
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 2.2e-53 213.4 218 52.3
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 2.2e-53 213.4 268 50.4
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 3.8e-53 212.6 256 46.9
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 3.8e-53 212.6 222 50.0
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 5.0e-53 212.2 222 54.1
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 6.5e-53 211.8 207 51.2
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 8.5e-53 211.5 218 51.8
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 1.1e-52 211.1 220 50.5
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 1.1e-52 211.1 260 45.8
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 1.4e-52 210.7 223 49.3
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 1.4e-52 210.7 207 53.1
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 1.4e-52 210.7 207 53.1
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 2.5e-52 209.9 195 55.4
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 7.2e-52 208.4 207 53.1
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 7.2e-52 208.4 227 49.8
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 9.4e-52 208.0 207 53.1
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 2.7e-51 206.5 201 53.7
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 4.6e-51 205.7 238 49.2
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 1.5e-49 200.7 222 48.2
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 4.8e-48 195.7 182 57.7
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 2.6e-46 189.9 187 56.7
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 1.0e-45 188.0 225 46.2
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.7e-45 187.2 168 58.3
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 2.9e-45 186.4 193 54.4
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 7.2e-44 181.8 166 61.4
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 2.1e-43 180.3 198 53.0
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 8.8e-42 174.9 169 57.4
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 1.7e-40 170.6 184 51.1
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 2.8e-40 169.9 181 49.7
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 6.3e-40 168.7 207 44.9
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 5.3e-39 165.6 183 47.5
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 9.1e-39 164.9 164 53.7
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 7.7e-38 161.8 169 55.0
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 1.5e-36 157.5 181 48.1
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 1.9e-36 157.1 223 41.7
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 4.2e-36 156.0 186 43.5
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 9.7e-33 144.8 232 37.1
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 9.7e-33 144.8 88 78.4
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 8.2e-32 141.7 83 81.9
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 1.8e-31 140.6 109 65.1
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 7.7e-30 135.2 141 54.6
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 1.7e-29 134.0 249 37.8
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 8.0e-27 125.2 147 51.7
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 8.0e-27 125.2 151 51.7
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 7.2e-20 102.1 99 58.6
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 2.0e-17 94.0 186 38.2
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 8.6e-13 78.6 52 65.4


User provided reference genes

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