Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 4.7e-109 397.9 205 100.0
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 4.4e-99 364.8 204 92.2
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 2.8e-93 345.5 205 85.4
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 5.2e-92 341.3 205 87.3
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 2.4e-89 332.4 205 82.0
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 1.5e-86 323.2 205 80.5
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 1.9e-86 322.8 205 80.5
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.3e-86 321.6 204 82.8
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 4.3e-86 321.6 205 81.0
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 4.3e-86 321.6 205 81.0
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 7.3e-86 320.9 205 81.0
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 9.6e-86 320.5 205 80.5
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 1.3e-85 320.1 205 79.5
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 2.1e-85 319.3 205 79.5
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 2.8e-85 318.9 206 80.1
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 2.8e-85 318.9 205 81.0
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 3.6e-85 318.5 205 79.0
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 4.8e-85 318.2 204 79.9
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 4.8e-85 318.2 202 80.7
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 8.1e-85 317.4 191 83.8
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 1.1e-84 317.0 204 79.9
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 5.3e-84 314.7 203 79.3
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 9.0e-84 313.9 205 79.5
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 2.0e-83 312.8 205 78.5
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 2.6e-83 312.4 205 75.6
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 3.4e-83 312.0 205 78.0
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 4.5e-83 311.6 205 78.5
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 4.5e-83 311.6 222 75.7
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 9.9e-83 310.5 205 78.5
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 1.3e-82 310.1 206 77.7
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 3.8e-82 308.5 200 79.0
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 4.9e-82 308.1 205 78.5
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 8.4e-82 307.4 200 81.0
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 1.1e-81 307.0 206 77.7
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 1.1e-81 307.0 187 85.0
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.1e-81 307.0 204 77.9
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.1e-81 307.0 204 77.9
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 2.4e-81 305.8 205 77.6
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 3.2e-81 305.4 206 75.7
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 4.2e-81 305.1 206 78.2
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 4.2e-81 305.1 191 81.2
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 5.4e-81 304.7 202 76.2
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 9.3e-81 303.9 206 75.2
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 1.6e-80 303.1 206 76.2
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 2.1e-80 302.8 206 77.2
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 2.1e-80 302.8 205 75.6
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 2.7e-80 302.4 204 77.5
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 3.5e-80 302.0 199 79.9
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 4.6e-80 301.6 189 82.0
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 7.9e-80 300.8 187 81.8
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 1.0e-79 300.4 205 76.6
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 1.3e-79 300.1 205 75.1
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 8.7e-79 297.4 205 74.1
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 1.1e-78 297.0 196 77.0
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 1.5e-78 296.6 204 74.5
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.5e-78 295.8 205 74.1
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 3.3e-78 295.4 205 74.6
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 5.6e-78 294.7 206 73.8
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 5.6e-78 294.7 205 73.7
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 5.6e-78 294.7 205 73.7
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 1.3e-77 293.5 201 73.1
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 2.1e-77 292.7 201 76.1
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 2.8e-77 292.4 205 73.2
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 2.8e-77 292.4 205 73.2
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 2.8e-77 292.4 205 74.1
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 2.8e-77 292.4 205 73.7
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 2.8e-77 292.4 205 74.1
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 2.8e-77 292.4 205 74.1
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 2.8e-77 292.4 205 73.2
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 3.6e-77 292.0 205 74.6
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 4.8e-77 291.6 205 73.2
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 6.2e-77 291.2 191 75.4
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 8.1e-77 290.8 205 72.7
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 8.1e-77 290.8 205 71.7
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 1.1e-76 290.4 205 73.7
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 1.8e-76 289.7 206 72.3
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 2.4e-76 289.3 205 73.2
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 2.4e-76 289.3 203 75.4
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 5.3e-76 288.1 191 74.9
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 5.3e-76 288.1 205 72.7
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 1.5e-75 286.6 206 71.8
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 2.0e-75 286.2 231 66.2
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 3.4e-75 285.4 199 74.4
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 4.5e-75 285.0 197 76.1
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 5.8e-75 284.6 200 74.0
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 7.6e-75 284.3 315 54.3
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 9.9e-75 283.9 198 73.7
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 3.8e-74 282.0 200 74.5
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 8.4e-74 280.8 226 67.3
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 3.2e-73 278.9 201 71.1
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 7.1e-73 277.7 198 73.2
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 1.5e-70 270.0 200 71.0
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 3.3e-70 268.9 228 65.4
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 4.8e-69 265.0 189 72.0
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 6.2e-69 264.6 187 72.7
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 9.0e-68 260.8 161 82.6
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 1.5e-67 260.0 169 77.5
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 3.2e-65 252.3 241 58.5
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 3.0e-63 245.7 206 63.1
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 7.4e-62 241.1 166 76.5
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 1.2e-56 223.8 156 73.7
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 2.2e-53 213.0 116 89.7
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 2.0e-51 206.5 132 77.3
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 1.1e-49 200.7 134 76.1
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 2.5e-49 199.5 106 88.7
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 4.2e-49 198.7 135 77.8
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 7.9e-48 194.5 135 74.1
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 1.8e-47 193.4 120 78.3
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 3.9e-47 192.2 116 81.0
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 9.7e-46 187.6 153 63.4
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 1.2e-43 180.6 108 82.4
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 9.1e-36 154.5 181 52.5
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 4.5e-35 152.1 148 59.5
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 7.2e-33 144.8 179 44.7
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 3.6e-32 142.5 184 44.0
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 1.2e-27 127.5 138 47.8
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.3e-26 124.0 93 67.7
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 2.9e-26 122.9 190 40.0
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 3.0e-23 112.8 231 33.8
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 6.8e-23 111.7 135 48.9
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 8.8e-23 111.3 211 38.9
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 1.3e-10 70.9 71 50.7
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 1.7e-10 70.5 197 27.4
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.2e-08 64.3 48 62.5
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 1.0e-07 61.2 56 62.5
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 1.4e-07 60.8 35 80.0
TAR371G0726 Trochodendron aralioides HOM05D000922 ORTHO05D008200 2.0e-06 57.0 33 81.8


User provided reference genes

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