Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19236 Vaccinium macrocarpon HOM05D008121 ORTHO05D009878 3.8e-64 248.1 129 100.0
Rhsim08G0185200 Rhododendron simsii HOM05D000290 ORTHO05D004630 8.8e-45 183.7 130 77.7
Actinidia25609 Actinidia chinensis HOM05D008121 ORTHO05D009878 3.4e-28 128.6 145 53.8
Dinv38465 Davidia involucrata HOM05D008121 ORTHO05D009878 3.4e-20 102.1 115 53.9
Hma1.2p1_0014F.1_g009910 Hydrangea macrophylla HOM05D008121 ORTHO05D009878 1.3e-19 100.1 138 47.8
Dinv02922 Davidia involucrata HOM05D008121 ORTHO05D009878 1.7e-19 99.8 115 53.9
CSS0015443 Camellia sinensis var. sinensis HOM05D008121 ORTHO05D009878 3.7e-19 98.6 150 46.0
Potri.015G091100 Populus trichocarpa HOM05D008121 ORTHO05D009878 4.7e-14 81.6 160 38.8
MSTRG.22918 Avicennia marina HOM05D008121 ORTHO05D009878 6.2e-14 81.3 133 42.1
HanXRQChr09g0272891 Helianthus annuus HOM05D008121 ORTHO05D009878 1.1e-13 80.5 144 43.1
Solyc03g110980.4 Solanum lycopersicum HOM05D008121 ORTHO05D009878 1.4e-13 80.1 142 44.4
Sopen03g030170 Solanum pennellii HOM05D008121 ORTHO05D009878 1.4e-13 80.1 142 44.4
SGA_v2.0_scaffold161G37821 Striga asiatica HOM05D008121 ORTHO05D009878 1.8e-13 79.7 139 38.8
Migut.I00480 Erythranthe guttata HOM05D008121 ORTHO05D009878 3.1e-13 79.0 134 38.8
CAN.G352.52 Capsicum annuum HOM05D008121 ORTHO05D009878 2.0e-12 76.3 136 43.4
Nitab4.5_0005327g0050 Nicotiana tabacum HOM05D008121 ORTHO05D009878 2.0e-12 76.3 134 41.0
PGSC0003DMG400015199 Solanum tuberosum HOM05D008121 ORTHO05D009878 2.6e-12 75.9 142 41.5
Atru.chr9.1017 Acer truncatum HOM05D008121 ORTHO05D009878 3.4e-12 75.5 142 37.3
DCAR_026211 Daucus carota HOM05D008121 ORTHO05D009878 3.4e-12 75.5 142 39.4
Nitab4.5_0005418g0010 Nicotiana tabacum HOM05D008121 ORTHO05D009878 3.4e-12 75.5 141 40.4
Oeu018378.1 Olea europaea HOM05D008121 ORTHO05D009878 7.5e-12 74.3 129 40.3
Duzib084G1233 Durio zibethinus HOM05D008121 ORTHO05D009878 1.3e-11 73.6 124 38.7
AUR62001288 Chenopodium quinoa HOM05D008121 ORTHO05D009878 4.9e-11 71.6 69 56.5
FvH4_5g07590 Fragaria vesca HOM05D008121 ORTHO05D009878 8.3e-11 70.9 172 34.9
FAN04G1418 Fragaria x ananassa HOM05D000290 ORTHO05D004630 1.4e-10 70.1 148 37.2
Sabra15G0113100 Salix brachista HOM05D000290 ORTHO05D004630 2.4e-10 69.3 150 36.7
Manes.14G055100 Manihot esculenta HOM05D008121 ORTHO05D009878 7.0e-10 67.8 174 32.2
AT3G48490 Arabidopsis thaliana HOM05D011481 ORTHO05D009878 9.2e-10 67.4 120 40.0
EL10Ac7g18085 Beta vulgaris HOM05D008121 ORTHO05D009878 9.2e-10 67.4 119 36.1
COL.COLO4_03517 Corchorus olitorius HOM05D008121 ORTHO05D009878 9.2e-10 67.4 143 38.5
FAN08G2628 Fragaria x ananassa HOM05D000290 ORTHO05D004630 9.2e-10 67.4 158 35.4
CiPaw.12G036100 Carya illinoinensis HOM05D008121 ORTHO05D009878 1.2e-09 67.0 161 34.2
Ah.15g095290 Amaranthus hybridus HOM05D001185 ORTHO05D002551 2.0e-09 66.2 70 54.3
Thhalv10011023m.g Eutrema salsugineum HOM05D011481 ORTHO05D009878 2.0e-09 66.2 108 42.6
Cc04_g10260 Coffea canephora HOM05D008121 ORTHO05D009878 2.7e-09 65.9 138 37.7
PGR044G1447 Punica granatum HOM05D011481 ORTHO05D009878 2.7e-09 65.9 146 35.6
CANSAT80G0868 Cannabis sativa HOM05D008121 ORTHO05D009878 3.5e-09 65.5 164 34.1
CiPaw.11G011700 Carya illinoinensis HOM05D008121 ORTHO05D009878 4.6e-09 65.1 154 33.8
Haze_07274 Corylus avellana HOM05D008121 ORTHO05D009878 4.6e-09 65.1 166 34.9
RcHm_v2.0_Chr7g0190901 Rosa chinensis HOM05D008121 ORTHO05D009878 4.6e-09 65.1 172 34.3
A06p19190 Brassica napus HOM05D011481 ORTHO05D009878 6.0e-09 64.7 113 40.7
BraA06t25002Z Brassica rapa HOM05D011481 ORTHO05D009878 6.0e-09 64.7 113 40.7
Cpa.g.sc4.77 Carica papaya HOM05D008121 ORTHO05D009878 6.0e-09 64.7 123 40.7
Eucgr.K02754 Eucalyptus grandis HOM05D011481 ORTHO05D009878 6.0e-09 64.7 164 34.8
THA.LOC104821506 Tarenaya hassleriana HOM05D011481 ORTHO05D009878 1.0e-08 63.9 151 37.7
TWI14G0571 Tripterygium wilfordii HOM05D008121 ORTHO05D009878 1.0e-08 63.9 173 32.4
arahy.Tifrunner.gnm1.ann1.DV5N5R Arachis hypogaea HOM05D008121 ORTHO05D009878 1.7e-08 63.2 109 37.6
QL10p005006 Quercus lobata HOM05D008121 ORTHO05D009878 1.7e-08 63.2 163 33.1
AL5G27920 Arabidopsis lyrata HOM05D011481 ORTHO05D009878 2.3e-08 62.8 126 38.1
Thecc.03G123300 Theobroma cacao HOM05D008121 ORTHO05D009878 3.0e-08 62.4 176 31.2
BcaC07g39334 Brassica carinata HOM05D011481 ORTHO05D009878 3.9e-08 62.0 113 40.7
C08p23500 Brassica napus HOM05D011481 ORTHO05D009878 3.9e-08 62.0 113 40.7
BolC8t49978H Brassica oleracea HOM05D011481 ORTHO05D009878 3.9e-08 62.0 113 40.7
BcaB01g00807 Brassica carinata HOM05D011481 ORTHO05D009878 5.0e-08 61.6 112 42.0
ECA232G1254 Erigeron canadensis HOM05D008121 ORTHO05D009878 5.0e-08 61.6 116 37.9
Gohir.D09G246100 Gossypium hirsutum HOM05D008121 ORTHO05D009878 5.0e-08 61.6 155 31.0
arahy.Tifrunner.gnm1.ann1.YZZN9M Arachis hypogaea HOM05D008121 ORTHO05D009878 6.6e-08 61.2 109 37.6
Duzib205G1258 Durio zibethinus HOM05D008121 ORTHO05D009878 6.6e-08 61.2 117 40.2
Carub.0005s1467 Capsella rubella HOM05D011481 ORTHO05D009878 1.5e-07 60.1 113 38.1
Ciclev10023121m.g Citrus clementina HOM05D008121 ORTHO05D009878 1.5e-07 60.1 47 63.8
Ciclev10024026m.g Citrus clementina HOM05D008121 ORTHO05D009878 1.5e-07 60.1 47 63.8
Nn4g22451 Nelumbo nucifera HOM05D008121 ORTHO05D009878 1.5e-07 60.1 52 67.3
Phvul.003G208400 Phaseolus vulgaris HOM05D008121 ORTHO05D009878 1.9e-07 59.7 79 45.6
GSVIVG01007536001 Vitis vinifera HOM05D008121 ORTHO05D009878 1.9e-07 59.7 130 38.5
Aa31LG4G17080 Aethionema arabicum HOM05D011481 ORTHO05D009878 7.3e-07 57.8 63 54.0
Lalb_Chr13g0297421 Lupinus albus HOM05D008121 ORTHO05D009878 7.3e-07 57.8 156 30.1
Gorai.006G270600 Gossypium raimondii HOM05D008121 ORTHO05D009878 1.2e-06 57.0 108 38.0
unitig_8.g4185 Utricularia gibba HOM05D000357 ORTHO05D009878 1.2e-06 57.0 66 50.0
Glyma.17G127300 Glycine max HOM05D008121 ORTHO05D009878 2.8e-06 55.8 144 29.2
Gohir.A09G245200 Gossypium hirsutum HOM05D008121 ORTHO05D009878 6.2e-06 54.7 107 36.4
Hund05652 Selenicereus undatus HOM05D008121 ORTHO05D009878 6.2e-06 54.7 45 57.8
MD06G1149100 Malus domestica HOM05D008121 ORTHO05D009878 8.1e-06 54.3 77 44.2
PSO339G0123 Papaver somniferum HOM05D008121 ORTHO05D009878 8.1e-06 54.3 66 51.5


User provided reference genes

Program Settings