Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19229 Vaccinium macrocarpon HOM05D007996 ORTHO05D009821 1.2e-30 136.0 75 100.0
Duzib084G1431 Durio zibethinus HOM05D007996 ORTHO05D009821 3.6e-14 81.3 73 71.2
CSS0022418 Camellia sinensis var. sinensis HOM05D007996 ORTHO05D009821 8.0e-14 80.1 73 72.6
CiPaw.12G036300 Carya illinoinensis HOM05D007996 ORTHO05D009821 2.0e-12 75.5 71 66.2
Atru.chr9.1020 Acer truncatum HOM05D007996 ORTHO05D009821 4.4e-12 74.3 71 66.2
Aqoxy5G03550 Aquilegia oxysepala HOM05D007996 ORTHO05D009821 5.7e-12 73.9 72 66.7
CAN.G1046.7 Capsicum annuum HOM05D007996 ORTHO05D009821 5.7e-12 73.9 74 63.5
Thecc.03G124100 Theobroma cacao HOM05D007996 ORTHO05D009821 5.7e-12 73.9 71 66.2
Solyc06g071930.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 1.3e-11 72.8 74 62.2
Sopen06g028210 Solanum pennellii HOM05D007996 ORTHO05D009821 1.3e-11 72.8 74 62.2
PGSC0003DMG400027111 Solanum tuberosum HOM05D007996 ORTHO05D009821 3.7e-11 71.2 74 60.8
Gohir.A12G188200 Gossypium hirsutum HOM05D007996 ORTHO05D009821 1.4e-10 69.3 71 62.0
Gohir.D12G191000 Gossypium hirsutum HOM05D007996 ORTHO05D009821 1.4e-10 69.3 71 62.0
Gorai.008G204900 Gossypium raimondii HOM05D007996 ORTHO05D009821 1.4e-10 69.3 71 62.0
Potri.012G094000 Populus trichocarpa HOM05D007996 ORTHO05D009821 7.0e-10 67.0 64 67.2
SalBow5G2505 Salvia bowleyana HOM05D007996 ORTHO05D009821 7.0e-10 67.0 71 60.6
SalBow5G3809 Salvia bowleyana HOM05D007996 ORTHO05D009821 7.0e-10 67.0 71 60.6
Actinidia25607 Actinidia chinensis HOM05D007996 ORTHO05D009821 9.1e-10 66.6 73 60.3
EL10Ac7g18091 Beta vulgaris HOM05D007996 ORTHO05D009821 9.1e-10 66.6 71 57.7
QL10p004811 Quercus lobata HOM05D007996 ORTHO05D009821 9.1e-10 66.6 70 61.4
Manes.14G054700 Manihot esculenta HOM05D007996 ORTHO05D009821 1.2e-09 66.2 63 66.7
PGR044G0405 Punica granatum HOM05D007996 ORTHO05D009821 1.6e-09 65.9 74 56.8
Rhsim08G0186300 Rhododendron simsii HOM05D007996 ORTHO05D009821 1.6e-09 65.9 75 60.0
MBI06_g40149_MAGBIO Magnolia biondii HOM05D007996 ORTHO05D009821 2.0e-09 65.5 67 62.7
AUR62001291 Chenopodium quinoa HOM05D007996 ORTHO05D009821 2.7e-09 65.1 71 56.3
Solyc03g110990.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 2.7e-09 65.1 75 57.3
CiPaw.11G011200 Carya illinoinensis HOM05D007996 ORTHO05D009821 3.5e-09 64.7 71 59.2
Lj4g0006448 Lotus japonicus HOM05D007996 ORTHO05D009821 3.5e-09 64.7 70 58.6
Hma1.2p1_0014F.1_g009860 Hydrangea macrophylla HOM05D007996 ORTHO05D009821 7.7e-09 63.5 75 60.0
TWI14G0037 Tripterygium wilfordii HOM05D007996 ORTHO05D009821 7.7e-09 63.5 71 60.6
Phvul.009G168600 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 1.0e-08 63.2 71 56.3
Nitab4.5_0005327g0040 Nicotiana tabacum HOM05D007996 ORTHO05D009821 1.3e-08 62.8 74 55.4
THA.LOC109116227 Tarenaya hassleriana HOM05D007996 ORTHO05D009821 2.2e-08 62.0 71 50.7
Glyma.17G127600 Glycine max HOM05D007996 ORTHO05D009821 2.9e-08 61.6 73 57.5
Sp6g12420 Schrenkiella parvula HOM05D013032 ORTHO05D009821 2.9e-08 61.6 75 49.3
Psat4g063440 Pisum sativum HOM05D007996 ORTHO05D009821 3.8e-08 61.2 71 57.7
Haze_07260 Corylus avellana HOM05D007996 ORTHO05D009821 5.0e-08 60.8 71 57.7
Glyma.05G045400 Glycine max HOM05D007996 ORTHO05D009821 5.0e-08 60.8 71 57.7
Medtr4g103970 Medicago truncatula HOM05D007996 ORTHO05D009821 5.0e-08 60.8 71 57.7
Carub.0008s1039 Capsella rubella HOM05D013032 ORTHO05D009821 6.5e-08 60.5 75 52.0
CARHR258170 Cardamine hirsuta HOM05D013032 ORTHO05D009821 6.5e-08 60.5 74 52.7
DCAR_007470 Daucus carota HOM05D007996 ORTHO05D009821 8.5e-08 60.1 78 51.3
Nn4g22432 Nelumbo nucifera HOM05D007996 ORTHO05D009821 8.5e-08 60.1 70 57.1
CAN.G352.51 Capsicum annuum HOM05D007996 ORTHO05D009821 1.1e-07 59.7 74 54.1
Oeu045473.1 Olea europaea HOM05D007996 ORTHO05D009821 1.1e-07 59.7 74 59.5
Phvul.003G208700 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 1.1e-07 59.7 71 56.3
Potri.015G091300 Populus trichocarpa HOM05D007996 ORTHO05D009821 1.1e-07 59.7 70 58.6
BcaB08g35412 Brassica carinata HOM05D013032 ORTHO05D009821 1.5e-07 59.3 75 49.3
Lalb_Chr07g0183251 Lupinus albus HOM05D007996 ORTHO05D009821 1.5e-07 59.3 71 57.7
Actinidia16189 Actinidia chinensis HOM05D007996 ORTHO05D009821 1.9e-07 58.9 36 86.1
Glyma.04G193300 Glycine max HOM05D007996 ORTHO05D009821 2.5e-07 58.5 74 52.7
Nn3g16560 Nelumbo nucifera HOM05D007996 ORTHO05D009821 2.5e-07 58.5 41 78.0
Cpa.g.sc4.79 Carica papaya HOM05D007996 ORTHO05D009821 3.2e-07 58.2 37 81.1
Manes.06G116300 Manihot esculenta HOM05D007996 ORTHO05D009821 4.2e-07 57.8 69 58.0
Lalb_Chr08g0236981 Lupinus albus HOM05D007996 ORTHO05D009821 5.5e-07 57.4 54 63.0
TPR.G40415 Trifolium pratense HOM05D007996 ORTHO05D009821 5.5e-07 57.4 71 53.5
TWI39G0948 Tripterygium wilfordii HOM05D000063 ORTHO05D008721 7.2e-07 57.0 61 55.7
Thhalv10015187m.g Eutrema salsugineum HOM05D013032 ORTHO05D009821 9.4e-07 56.6 75 49.3
BcaC04g20800 Brassica carinata HOM05D013032 ORTHO05D009821 1.2e-06 56.2 75 48.0
A10p08350 Brassica napus HOM05D013032 ORTHO05D009821 1.2e-06 56.2 75 48.0
BolC9t56782H Brassica oleracea HOM05D013032 ORTHO05D009821 1.2e-06 56.2 75 48.0
BraSC37t46169Z Brassica rapa HOM05D013032 ORTHO05D009821 1.2e-06 56.2 75 48.0
ClCG03G003560 Citrullus lanatus HOM05D007996 ORTHO05D009821 1.2e-06 56.2 73 50.7
MELO3C002341.2 Cucumis melo HOM05D007996 ORTHO05D009821 1.2e-06 56.2 75 50.7
Oeu037569.1 Olea europaea HOM05D007996 ORTHO05D009821 1.2e-06 56.2 74 56.8
AL8G24410 Arabidopsis lyrata HOM05D013032 ORTHO05D009821 2.1e-06 55.5 74 48.6
AT5G50335 Arabidopsis thaliana HOM05D013032 ORTHO05D009821 2.1e-06 55.5 74 51.4
Cc04_g10190 Coffea canephora HOM05D007996 ORTHO05D009821 2.1e-06 55.5 38 76.3
AUR62025676 Chenopodium quinoa HOM05D007996 ORTHO05D009821 2.7e-06 55.1 71 52.1
COL.COLO4_16835 Corchorus olitorius HOM05D007996 ORTHO05D009821 2.7e-06 55.1 71 59.2
Peaxi162Scf00089g00319 Petunia axillaris HOM05D007996 ORTHO05D009821 2.7e-06 55.1 68 57.4
CsaV3_1G009400 Cucumis sativus L. HOM05D007996 ORTHO05D009821 6.1e-06 53.9 75 50.7
Sed0027846 Sechium edule HOM05D007996 ORTHO05D009821 6.1e-06 53.9 73 49.3


User provided reference genes

Program Settings