Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 7.5e-188 660.6 395 100.0
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 1.4e-165 586.6 398 86.2
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 1.9e-151 539.7 394 77.7
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 6.2e-150 534.6 405 71.4
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 1.1e-149 533.9 402 85.6
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 1.2e-148 530.4 405 81.2
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 2.6e-148 529.3 395 80.8
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 7.6e-148 527.7 385 83.6
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 9.9e-148 527.3 403 70.7
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 9.9e-148 527.3 415 82.4
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 1.1e-146 523.9 413 83.1
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.4e-146 523.5 397 75.3
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 4.2e-146 521.9 401 75.1
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 5.5e-146 521.5 395 69.9
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 7.1e-146 521.2 403 82.1
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 9.3e-146 520.8 395 70.4
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 9.3e-146 520.8 395 70.4
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 2.1e-145 519.6 403 82.1
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 2.1e-145 519.6 411 83.0
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 3.5e-145 518.8 396 85.1
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 6.0e-145 518.1 386 82.4
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 1.0e-144 517.3 392 84.9
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 6.7e-144 514.6 399 79.9
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 6.7e-144 514.6 417 69.8
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 1.1e-143 513.8 389 82.3
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 1.5e-143 513.5 408 74.5
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 2.5e-143 512.7 404 80.9
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 2.5e-143 512.7 404 72.0
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 4.3e-143 511.9 400 79.2
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 7.4e-143 511.1 396 78.3
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 2.1e-142 509.6 414 80.0
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.8e-142 509.2 400 78.2
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 3.7e-142 508.8 397 75.3
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 4.8e-142 508.4 422 77.5
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 2.4e-141 506.1 393 79.4
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.5e-140 503.4 393 81.9
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 2.0e-140 503.1 376 84.0
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 3.4e-140 502.3 397 80.1
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 7.6e-140 501.1 404 79.7
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 1.0e-139 500.7 416 69.2
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 6.5e-139 498.0 411 76.2
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 4.6e-137 491.9 407 74.9
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 2.3e-136 489.6 404 79.2
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 6.7e-136 488.0 402 74.6
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 2.5e-135 486.1 409 71.1
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 2.5e-135 486.1 407 75.7
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 3.3e-135 485.7 407 77.9
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 1.6e-134 483.4 402 70.1
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 4.1e-133 478.8 414 63.0
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 6.9e-133 478.0 370 81.4
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 2.6e-132 476.1 430 63.5
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.7e-131 473.4 401 71.8
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 8.5e-131 471.1 400 66.5
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 1.9e-130 469.9 408 73.3
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 1.9e-130 469.9 399 68.9
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 1.2e-129 467.2 444 58.8
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 1.6e-129 466.8 414 73.4
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.4e-128 463.8 404 74.5
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 3.9e-128 462.2 415 67.5
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 7.4e-127 458.0 400 73.5
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 9.7e-127 457.6 392 62.2
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.7e-127 457.6 413 72.2
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.7e-127 457.6 409 73.6
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 4.8e-126 455.3 400 73.5
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 8.2e-126 454.5 424 67.0
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.1e-125 454.1 412 72.8
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 1.4e-125 453.8 383 72.6
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 5.3e-125 451.8 392 60.7
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 1.2e-124 450.7 365 67.1
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 2.6e-124 449.5 403 66.7
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 2.6e-124 449.5 392 60.2
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 3.4e-124 449.1 432 64.4
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 1.3e-123 447.2 361 77.3
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 5.0e-123 445.3 386 67.1
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 1.0e-120 437.6 364 77.7
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 3.9e-120 435.6 398 64.3
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 5.1e-120 435.3 417 63.8
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 8.8e-120 434.5 392 70.2
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 1.1e-119 434.1 406 71.9
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 7.4e-119 431.4 334 71.6
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 9.7e-119 431.0 410 70.7
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 1.3e-118 430.6 405 62.5
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 1.3e-118 430.6 405 62.5
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 2.2e-118 429.9 406 71.2
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 2.2e-118 429.9 406 71.2
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 2.2e-118 429.9 402 63.7
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 2.2e-118 429.9 402 63.7
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.2e-118 429.9 361 63.4
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 3.7e-118 429.1 398 64.8
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 4.8e-118 428.7 402 73.1
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 6.3e-118 428.3 410 71.2
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 2.4e-117 426.4 404 65.3
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 1.2e-116 424.1 410 70.5
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 1.5e-116 423.7 410 65.6
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 1.5e-116 423.7 385 66.5
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 7.7e-116 421.4 354 68.1
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 1.9e-114 416.8 401 70.1
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 3.2e-114 416.0 413 63.4
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 3.9e-112 409.1 373 66.2
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 2.6e-111 406.4 306 73.9
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 7.4e-111 404.8 335 73.4
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 1.3e-110 404.1 311 80.4
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 3.7e-110 402.5 398 59.8
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 8.2e-110 401.4 332 71.1
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 1.6e-108 397.1 398 58.3
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 5.9e-108 395.2 419 58.5
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 1.9e-106 390.2 401 64.6
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.9e-106 390.2 401 63.8
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 1.2e-105 387.5 409 58.9
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 4.7e-105 385.6 363 70.5
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.4e-104 384.0 399 61.2
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.3e-104 383.3 356 71.1
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 3.7e-102 375.9 336 58.3
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.3e-101 372.1 371 66.8
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 5.7e-95 352.1 396 55.1
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 3.7e-94 349.4 395 65.1
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 5.4e-93 345.5 441 49.2
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.0e-92 343.6 364 54.1
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.0e-91 341.3 382 52.9
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 2.3e-88 330.1 343 50.7
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 1.2e-87 327.8 400 54.2
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 2.2e-86 323.6 330 51.2
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 1.3e-83 314.3 169 85.8
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 6.6e-83 312.0 180 79.4
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 3.7e-78 296.2 332 47.6
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 8.6e-75 285.0 310 48.1
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 8.6e-75 285.0 372 55.6
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 1.5e-74 284.3 285 71.2
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 3.1e-72 276.6 280 73.2
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 1.0e-67 261.5 293 69.3
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 6.2e-65 252.3 137 86.9
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 1.5e-58 231.1 123 88.6
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 2.2e-54 217.2 254 53.9
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 8.4e-54 215.3 156 77.6
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 1.6e-52 211.1 126 80.2
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 4.9e-46 189.5 113 73.5
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.4e-45 188.0 172 57.6
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 1.2e-44 184.9 329 35.6
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 1.4e-40 171.4 104 78.8
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 7.6e-39 165.6 146 64.4
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 6.9e-32 142.5 259 35.1
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 3.3e-26 123.6 100 61.0
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 9.0e-16 89.0 94 47.9
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 4.2e-13 80.1 38 89.5


User provided reference genes

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