Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19172 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 0.0e+00 1430.2 1053 100.0
vmacro19175 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 8.7e-74 283.1 225 67.6
Rhsim08G0196300 Rhododendron simsii HOM05D005764 ORTHO05D006600 1.9e-73 282.0 198 72.2
vmacro19173 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 1.6e-64 252.3 220 63.6
CSS0040489 Camellia sinensis var. sinensis HOM05D005764 ORTHO05D006600 3.6e-59 234.6 237 54.4
Dinv13731 Davidia involucrata HOM05D005764 ORTHO05D006600 7.7e-54 216.9 200 57.0
vmacro19171 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 2.7e-51 208.4 147 72.1
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.1e-49 203.0 174 60.9
Ah.11g046810 Amaranthus hybridus HOM05D005764 ORTHO05D006600 2.6e-49 201.8 202 52.0
TAR362G1049 Trochodendron aralioides HOM05D005764 ORTHO05D006600 2.0e-46 192.2 201 52.7
Rhsim03G0151700 Rhododendron simsii HOM05D000114 ORTHO05D000037 5.0e-45 187.6 174 68.4
Sc04g0000230 Simmondsia chinensis HOM05D005764 ORTHO05D006600 8.5e-45 186.8 230 47.4
Cc00_g12250 Coffea canephora HOM05D005764 ORTHO05D006600 2.7e-43 181.8 203 47.3
SalBow7G2732 Salvia bowleyana HOM05D005764 ORTHO05D006600 6.1e-43 180.6 201 46.8
Rhsim03G0129100 Rhododendron simsii HOM05D007209 ORTHO05D000921 7.9e-43 180.3 161 59.6
Haze_07107 Corylus avellana HOM05D005764 ORTHO05D006600 1.4e-42 179.5 192 50.5
CAN.G843.18 Capsicum annuum HOM05D005764 ORTHO05D006600 8.8e-42 176.8 201 44.3
DCAR_021406 Daucus carota HOM05D005764 ORTHO05D006600 8.8e-42 176.8 228 41.7
Manes.06G126050 Manihot esculenta HOM05D005764 ORTHO05D006600 2.0e-41 175.6 197 49.2
MD14G1148300 Malus domestica HOM05D005764 ORTHO05D006600 5.7e-41 174.1 210 43.8
TAR633G1425 Trochodendron aralioides HOM05D005764 ORTHO05D006600 5.7e-41 174.1 182 52.2
QL11p027136 Quercus lobata HOM05D005764 ORTHO05D006600 7.4e-41 173.7 202 49.5
Dinv21306 Davidia involucrata HOM05D005764 ORTHO05D006600 9.7e-41 173.3 199 47.2
AUR62034761 Chenopodium quinoa HOM05D005764 ORTHO05D006600 1.3e-40 172.9 181 49.7
AUR62041690 Chenopodium quinoa HOM05D005764 ORTHO05D006600 1.3e-40 172.9 181 49.7
MSTRG.22851 Avicennia marina HOM05D005764 ORTHO05D006600 2.2e-40 172.2 201 45.8
MD06G1131900 Malus domestica HOM05D005764 ORTHO05D006600 3.7e-40 171.4 206 43.2
EL10Ac5g11299 Beta vulgaris HOM05D005764 ORTHO05D006600 4.8e-40 171.0 196 48.5
Actinidia07859 Actinidia chinensis HOM05D005764 ORTHO05D006600 6.3e-40 170.6 201 45.8
AUR62009526 Chenopodium quinoa HOM05D005764 ORTHO05D006600 6.3e-40 170.6 184 48.4
Migut.I00614 Erythranthe guttata HOM05D005764 ORTHO05D006600 3.1e-39 168.3 206 44.2
Nitab4.5_0000663g0160 Nicotiana tabacum HOM05D005764 ORTHO05D006600 5.3e-39 167.5 201 43.8
Sed0013038 Sechium edule HOM05D005764 ORTHO05D006600 9.1e-39 166.8 200 46.5
PGSC0003DMG400014245 Solanum tuberosum HOM05D005764 ORTHO05D006600 2.0e-38 165.6 198 43.4
Nitab4.5_0008892g0030 Nicotiana tabacum HOM05D005764 ORTHO05D006600 1.0e-37 163.3 201 43.3
Gorai.003G116400 Gossypium raimondii HOM05D005764 ORTHO05D006600 1.3e-37 162.9 202 45.0
QL04p067861 Quercus lobata HOM05D005764 ORTHO05D006600 1.3e-37 162.9 202 43.6
ClCG02G014020 Citrullus lanatus HOM05D005764 ORTHO05D006600 1.7e-37 162.5 199 45.7
Rhsim06G0177300 Rhododendron simsii HOM05D005764 ORTHO05D006600 2.9e-37 161.8 243 40.3
Cfa014216 Carpinus fangiana HOM05D005764 ORTHO05D006600 3.8e-37 161.4 202 43.6
Gohir.D03G110000 Gossypium hirsutum HOM05D005764 ORTHO05D006600 5.0e-37 161.0 200 46.0
Lj1C797T15 Lonicera japonica HOM05D005764 ORTHO05D006600 6.5e-37 160.6 200 43.5
Lj1C797T16 Lonicera japonica HOM05D005764 ORTHO05D006600 6.5e-37 160.6 200 43.5
Solyc03g118280.1 Solanum lycopersicum HOM05D005764 ORTHO05D006600 1.1e-36 159.8 198 43.4
Sopen03g037190 Solanum pennellii HOM05D005764 ORTHO05D006600 1.1e-36 159.8 198 43.4
Actinidia25528 Actinidia chinensis HOM05D005764 ORTHO05D006600 1.5e-36 159.5 140 60.0
Haze_12617 Corylus avellana HOM05D005764 ORTHO05D006600 2.5e-36 158.7 202 43.1
PGR042G2810 Punica granatum HOM05D005764 ORTHO05D006600 4.2e-36 157.9 201 43.8
Nn7g38163 Nelumbo nucifera HOM05D005764 ORTHO05D006600 5.5e-36 157.5 202 45.5
QL04p061529 Quercus lobata HOM05D005764 ORTHO05D006600 7.2e-36 157.1 200 45.0
Haze_12606 Corylus avellana HOM05D005764 ORTHO05D006600 1.6e-35 156.0 202 42.6
Oeu005567.3 Olea europaea HOM05D005764 ORTHO05D006600 1.6e-35 156.0 209 42.1
Cpa.g.sc211.34 Carica papaya HOM05D005764 ORTHO05D006600 2.1e-35 155.6 204 42.6
FvH4_5g09340 Fragaria vesca HOM05D005764 ORTHO05D006600 3.6e-35 154.8 251 37.8
PSO017G0179 Papaver somniferum HOM05D005764 ORTHO05D006600 4.7e-35 154.5 258 37.2
CSS0045653 Camellia sinensis var. sinensis HOM05D005764 ORTHO05D006600 6.1e-35 154.1 209 43.1
Atru.chr6.1906 Acer truncatum HOM05D005764 ORTHO05D006600 8.0e-35 153.7 200 46.0
RcHm_v2.0_Chr7g0188811 Rosa chinensis HOM05D005764 ORTHO05D006600 1.4e-34 152.9 200 43.0
CSS0031853 Camellia sinensis var. sinensis HOM05D005764 ORTHO05D006600 1.8e-34 152.5 212 42.5
FAN18G2453 Fragaria x ananassa HOM05D005764 ORTHO05D006600 2.3e-34 152.1 251 37.5
Lsat_1_v5_gn_4_84661 Lactuca sativa HOM05D005764 ORTHO05D006600 2.3e-34 152.1 195 44.6
vmacro12075 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 3.0e-34 151.8 247 38.1
Ciclev10010938m.g Citrus clementina HOM05D005764 ORTHO05D006600 8.8e-34 150.2 209 41.6
CsaV3_5G006140 Cucumis sativus L. HOM05D005764 ORTHO05D006600 8.8e-34 150.2 198 41.9
SGA_v2.0_scaffold74G24732 Striga asiatica HOM05D005764 ORTHO05D006600 5.7e-33 147.5 245 38.8
Thecc.01G197100 Theobroma cacao HOM05D005764 ORTHO05D006600 9.7e-33 146.7 222 40.1
TWI14G0891 Tripterygium wilfordii HOM05D005764 ORTHO05D006600 2.8e-32 145.2 244 39.8
GSVIVG01030107001 Vitis vinifera HOM05D005764 ORTHO05D006600 2.8e-32 145.2 228 39.9
Potri.015G105400 Populus trichocarpa HOM05D005764 ORTHO05D006600 3.7e-32 144.8 209 43.5
Dinv18433 Davidia involucrata HOM05D005764 ORTHO05D006600 6.3e-32 144.1 201 45.8
THA.LOC104804672 Tarenaya hassleriana HOM05D005764 ORTHO05D006600 2.4e-31 142.1 224 37.5
ATR0317G130 Amborella trichopoda HOM05D005764 ORTHO05D006600 1.2e-30 139.8 203 41.9
Rhsim08G0139300 Rhododendron simsii HOM05D000251 ORTHO05D007889 1.2e-30 139.8 136 56.6
Atru.chr6.3404 Acer truncatum HOM05D005764 ORTHO05D006600 3.5e-30 138.3 211 41.7
Gohir.A03G056500 Gossypium hirsutum HOM05D005764 ORTHO05D006600 1.0e-29 136.7 216 40.7
Duzib205G1181 Durio zibethinus HOM05D005764 ORTHO05D006600 1.3e-29 136.3 212 41.0
HanXRQChr09g0273911 Helianthus annuus HOM05D005764 ORTHO05D006600 1.7e-29 136.0 183 42.1
Aa31LG11G1530 Aethionema arabicum HOM05D005764 ORTHO05D006600 3.8e-29 134.8 245 35.5
Lj1A1039T30 Lonicera japonica HOM05D005764 ORTHO05D006600 5.5e-28 131.0 197 41.1
Aqoxy7G02956 Aquilegia oxysepala HOM05D005764 ORTHO05D006600 7.2e-28 130.6 201 37.8
HanXRQChr16g0498891 Helianthus annuus HOM05D005764 ORTHO05D006600 3.6e-27 128.3 189 40.2
CAN.G177.15 Capsicum annuum HOM05D005764 ORTHO05D006600 1.4e-26 126.3 233 36.1
Ciclev10033858m.g Citrus clementina HOM05D005764 ORTHO05D006600 2.3e-26 125.6 181 40.9
Carub.0008s2268 Capsella rubella HOM05D005764 ORTHO05D006600 8.8e-26 123.6 200 37.5
Prupe.5G142900 Prunus persica HOM05D005764 ORTHO05D006600 2.6e-25 122.1 193 34.2
BcaB02g09611 Brassica carinata HOM05D005764 ORTHO05D006600 5.7e-25 120.9 200 40.0
vmacro18043 Vaccinium macrocarpon HOM05D007209 ORTHO05D000005 7.5e-25 120.6 101 62.4
Thhalv10003592m.g Eutrema salsugineum HOM05D005764 ORTHO05D006600 1.3e-24 119.8 246 33.7
QL04p006829 Quercus lobata HOM05D000056 ORTHO05D000019 1.7e-24 119.4 155 46.5
Sopen07g023950 Solanum pennellii HOM05D005764 ORTHO05D006600 2.2e-24 119.0 204 38.7
PGSC0003DMG400017401 Solanum tuberosum HOM05D005764 ORTHO05D006600 1.8e-23 115.9 204 38.2
Sp2g25170 Schrenkiella parvula HOM05D005764 ORTHO05D006600 2.4e-23 115.5 200 35.0
Thecc.03G139200 Theobroma cacao HOM05D005764 ORTHO05D006600 5.4e-23 114.4 129 45.7
CARHR275790 Cardamine hirsuta HOM05D005764 ORTHO05D006600 1.2e-22 113.2 201 38.3
C03p65110 Brassica napus HOM05D005764 ORTHO05D006600 2.0e-22 112.5 196 39.3
AL8G38750 Arabidopsis lyrata HOM05D005764 ORTHO05D006600 3.5e-22 111.7 204 39.2
BolC3t18765H Brassica oleracea HOM05D005764 ORTHO05D006600 3.5e-22 111.7 196 39.3
DCAR_016460 Daucus carota HOM05D005764 ORTHO05D006600 4.5e-22 111.3 204 34.3
CiPaw.11G052700 Carya illinoinensis HOM05D005764 ORTHO05D006600 1.0e-21 110.2 121 47.1
AT5G61990 Arabidopsis thaliana HOM05D005764 ORTHO05D006600 1.3e-21 109.8 245 33.9
A06p28690 Brassica napus HOM05D005764 ORTHO05D006600 3.8e-21 108.2 186 39.8
BraA06t25809Z Brassica rapa HOM05D005764 ORTHO05D006600 3.8e-21 108.2 186 39.8
Rhsim08G0112700 Rhododendron simsii HOM05D007209 ORTHO05D000921 1.9e-20 105.9 90 64.4
Lsat_1_v5_gn_9_103540 Lactuca sativa HOM05D005764 ORTHO05D006600 2.5e-20 105.5 199 32.7
HanXRQChr03g0075031 Helianthus annuus HOM05D005764 ORTHO05D006600 5.5e-20 104.4 203 34.0
Rhsim01G0206000 Rhododendron simsii HOM05D007209 ORTHO05D000921 5.5e-20 104.4 101 57.4
Rhsim01G0206100 Rhododendron simsii HOM05D007209 ORTHO05D000921 9.5e-20 103.6 182 39.6
Os07g0300200 Oryza sativa ssp. japonica HOM05D005764 ORTHO05D006600 1.0e-18 100.1 215 30.7
Atru.chr6.3419 Acer truncatum HOM05D005764 ORTHO05D006600 1.4e-18 99.8 203 34.0
Atru.chr6.3407 Acer truncatum HOM05D005764 ORTHO05D006600 4.0e-18 98.2 204 33.3
Ciclev10014235m.g Citrus clementina HOM05D005764 ORTHO05D006600 4.4e-17 94.7 150 38.0
CDE05G2510 Ceratophyllum demersum HOM05D005764 ORTHO05D006600 1.4e-15 89.7 181 36.5
ECA232G3323 Erigeron canadensis HOM05D005764 ORTHO05D006600 2.4e-15 89.0 132 36.4
Eucgr.K02196 Eucalyptus grandis HOM05D005764 ORTHO05D006600 3.8e-13 81.6 102 45.1
SEGI_02979 Sequoiadendron giganteum HOM05D007551 ORTHO05D006600 6.6e-13 80.9 190 28.9
RcHm_v2.0_Chr2g0162681 Rosa chinensis HOM05D005764 ORTHO05D006600 1.1e-12 80.1 171 36.8
Atru.chr1.4150 Acer truncatum HOM05D005764 ORTHO05D006600 2.5e-12 79.0 159 37.1
ECA248G1009 Erigeron canadensis HOM05D005764 ORTHO05D006600 2.5e-12 79.0 127 38.6
CDE02G2785 Ceratophyllum demersum HOM05D005764 ORTHO05D006600 7.3e-12 77.4 221 25.8
Rhsim04G0134000 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.1e-11 75.9 178 34.3
Solyc07g045400.1 Solanum lycopersicum HOM05D005764 ORTHO05D006600 2.1e-11 75.9 152 34.9
Nitab4.5_0005425g0010 Nicotiana tabacum HOM05D005764 ORTHO05D006600 2.8e-11 75.5 84 45.2
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 3.6e-11 75.1 174 30.5
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 3.6e-11 75.1 174 30.5
Nitab4.5_0006992g0030 Nicotiana tabacum HOM05D005764 ORTHO05D006600 6.1e-11 74.3 84 44.0
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 8.0e-11 73.9 175 30.9
vmacro05171 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 3.0e-10 72.0 188 31.9
MELO3C011746.2 Cucumis melo HOM05D005764 ORTHO05D006600 6.8e-10 70.9 92 42.4
ECA232G4944 Erigeron canadensis HOM05D000422 ORTHO05D006600 6.8e-10 70.9 110 38.2
MD11G1144200 Malus domestica HOM05D007212 ORTHO05D009094 6.8e-10 70.9 205 27.8
Actinidia09797 Actinidia chinensis HOM05D005764 ORTHO05D006600 8.9e-10 70.5 54 61.1
Actinidia24178 Actinidia chinensis HOM05D013777 ORTHO05D000921 1.5e-09 69.7 179 29.1
CAN.G805.2 Capsicum annuum HOM05D005764 ORTHO05D006600 1.5e-09 69.7 110 35.5
Rhsim12G0122900 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.5e-09 69.7 178 35.4
ATR0317G133 Amborella trichopoda HOM05D005764 ORTHO05D006600 2.6e-09 68.9 88 37.5
ECA240G4054 Erigeron canadensis HOM05D005764 ORTHO05D006600 5.7e-09 67.8 134 31.3
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 7.5e-09 67.4 176 29.0
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 9.8e-09 67.0 163 35.6
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 1.7e-08 66.2 171 28.7
MELO3C030714.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.2e-08 65.9 157 40.1
ClCG03G011480 Citrullus lanatus HOM05D007209 ORTHO05D000921 6.4e-08 64.3 166 31.3
Glyma.02G280200 Glycine max HOM05D007426 ORTHO05D034362 6.4e-08 64.3 100 35.0
vmacro19174 Vaccinium macrocarpon HOM05D005764 ORTHO05D427044 8.3e-08 63.9 34 88.2
arahy.Tifrunner.gnm1.ann1.LQ1LZI Arachis hypogaea HOM05D007409 ORTHO05D009264 1.1e-07 63.5 110 34.5
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 1.1e-07 63.5 152 28.9
CSS0009073 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.8e-07 62.8 178 36.5
PSO675G6037 Papaver somniferum HOM05D010315 ORTHO05D011532 2.4e-07 62.4 100 32.0
ATR0580G437 Amborella trichopoda HOM05D030519 ORTHO05D021219 3.2e-07 62.0 89 36.0
COL.COLO4_12924 Corchorus olitorius HOM05D006819 ORTHO05D008763 3.2e-07 62.0 102 32.4
Sed0005043 Sechium edule HOM05D008619 ORTHO05D000090 4.1e-07 61.6 102 32.4
Actinidia05689 Actinidia chinensis HOM05D007639 ORTHO05D009509 5.4e-07 61.2 113 30.1
MSTRG.16141 Avicennia marina HOM05D000001 ORTHO05D008780 5.4e-07 61.2 108 27.8
Cfa010641 Carpinus fangiana HOM05D064493 ORTHO05D021219 5.4e-07 61.2 83 42.2
HPP92_025492 Vanilla planifolia HOM05D005764 ORTHO05D006600 5.4e-07 61.2 82 41.5
Actinidia05403 Actinidia chinensis HOM05D013777 ORTHO05D000921 7.0e-07 60.8 178 27.0
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 7.0e-07 60.8 158 31.0
AUR62021185 Chenopodium quinoa HOM05D006287 ORTHO05D008192 9.2e-07 60.5 105 35.2
TWI63G1755 Tripterygium wilfordii HOM05D000001 ORTHO05D008780 9.2e-07 60.5 107 31.8
MELO3C029648.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.2e-06 60.1 158 39.2
FAN11G0418 Fragaria x ananassa HOM05D003757 ORTHO05D000090 1.2e-06 60.1 105 30.5
FvH4_3g42580 Fragaria vesca HOM05D000002 ORTHO05D000001 1.6e-06 59.7 105 32.4
SalBow2G2822 Salvia bowleyana HOM05D006819 ORTHO05D008763 1.6e-06 59.7 123 32.5
SEGI_32122 Sequoiadendron giganteum HOM05D007291 ORTHO05D009038 1.6e-06 59.7 173 28.3
Thecc.06G069300 Theobroma cacao HOM05D006819 ORTHO05D008763 1.6e-06 59.7 101 31.7
AUR62037953 Chenopodium quinoa HOM05D007209 ORTHO05D000921 2.0e-06 59.3 152 30.9
Dinv01169 Davidia involucrata HOM05D007209 ORTHO05D000921 2.0e-06 59.3 162 28.4
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 2.0e-06 59.3 177 28.2
Aqoxy7G03003 Aquilegia oxysepala HOM05D005764 ORTHO05D006600 2.7e-06 58.9 78 35.9
AUR62015977 Chenopodium quinoa HOM05D006287 ORTHO05D008192 2.7e-06 58.9 105 33.3
ClCG03G008640 Citrullus lanatus HOM05D007209 ORTHO05D000921 2.7e-06 58.9 99 33.3
HanXRQChr04g0120331 Helianthus annuus HOM05D002986 ORTHO05D003966 2.7e-06 58.9 97 32.0
arahy.Tifrunner.gnm1.ann1.3K1SXW Arachis hypogaea HOM05D000162 ORTHO05D000090 3.5e-06 58.5 116 29.3
HanXRQChr14g0444491 Helianthus annuus HOM05D007291 ORTHO05D009038 3.5e-06 58.5 195 24.6
HPP92_023170 Vanilla planifolia HOM05D007128 ORTHO05D009059 3.5e-06 58.5 104 32.7
Migut.G01107 Erythranthe guttata HOM05D007212 ORTHO05D009094 4.6e-06 58.2 98 38.8
SEGI_12665 Sequoiadendron giganteum HOM05D007455 ORTHO05D009431 4.6e-06 58.2 174 23.0
HPP92_025444 Vanilla planifolia HOM05D005764 ORTHO05D006600 4.6e-06 58.2 66 40.9
arahy.Tifrunner.gnm1.ann1.0YDK6Q Arachis hypogaea HOM05D006842 ORTHO05D008908 5.9e-06 57.8 108 31.5
SalBow2G3436 Salvia bowleyana HOM05D006819 ORTHO05D008763 5.9e-06 57.8 109 33.9
arahy.Tifrunner.gnm1.ann1.25Z6GM Arachis hypogaea HOM05D006842 ORTHO05D008908 7.8e-06 57.4 104 31.7
CARHR051000 Cardamine hirsuta HOM05D010315 ORTHO05D011376 7.8e-06 57.4 104 28.8
Migut.F00579 Erythranthe guttata HOM05D000001 ORTHO05D000003 7.8e-06 57.4 201 23.4


User provided reference genes

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