Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 0.0e+00 1276.5 630 100.0
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 1.6e-211 740.0 647 60.4
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 1.5e-206 723.4 649 60.2
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 1.7e-197 693.3 627 59.0
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 2.0e-195 686.4 556 62.9
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 5.9e-195 684.9 554 62.1
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 2.5e-193 679.5 636 57.4
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 1.2e-192 677.2 636 57.1
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 1.4e-191 673.7 552 61.4
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.2e-190 670.6 552 61.8
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 2.0e-190 669.8 628 56.4
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 3.4e-190 669.1 623 56.2
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 4.4e-190 668.7 614 58.3
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 9.8e-190 667.5 628 55.9
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 1.7e-189 666.8 633 54.8
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 2.2e-189 666.4 619 56.7
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 3.7e-189 665.6 616 56.7
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 3.7e-189 665.6 614 57.8
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 4.9e-189 665.2 619 56.2
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 1.6e-187 660.2 627 55.3
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 1.7e-186 656.8 625 55.7
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 1.5e-185 653.7 623 55.7
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 2.5e-185 652.9 619 55.7
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 1.2e-184 650.6 632 55.2
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 2.1e-184 649.8 621 54.8
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 2.1e-184 649.8 547 59.6
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 6.2e-184 648.3 626 55.1
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 8.1e-184 647.9 623 55.2
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 1.1e-183 647.5 574 57.1
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 6.8e-183 644.8 620 55.6
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 8.9e-183 644.4 627 54.9
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 1.2e-182 644.0 653 53.0
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 2.6e-182 642.9 625 53.3
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 5.8e-182 641.7 552 58.2
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 9.8e-182 641.0 548 58.8
Hma1.2p1_0093F.1_g046930 Hydrangea macrophylla HOM05D005105 ORTHO05D006244 1.7e-181 640.2 389 75.1
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 2.9e-181 639.4 554 58.3
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 2.9e-181 639.4 619 54.3
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 4.9e-181 638.6 551 59.9
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 8.3e-181 637.9 624 53.7
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 1.1e-180 637.5 617 54.5
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 1.4e-180 637.1 624 54.3
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 2.4e-180 636.3 626 55.1
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 4.1e-180 635.6 624 54.3
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 4.1e-180 635.6 616 54.7
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 2.7e-179 632.9 624 53.8
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 6.0e-179 631.7 622 52.9
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 7.8e-179 631.3 637 52.4
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 1.7e-178 630.2 608 53.9
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 2.3e-178 629.8 611 55.5
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 3.0e-178 629.4 624 54.2
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 1.1e-177 627.5 611 54.7
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 9.5e-177 624.4 615 54.0
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 1.8e-175 620.2 624 52.9
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 4.0e-175 619.0 624 53.7
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 8.9e-175 617.8 621 53.6
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 1.2e-174 617.5 642 52.0
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 3.4e-174 615.9 554 57.0
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 4.4e-174 615.5 642 52.3
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 9.9e-174 614.4 614 53.4
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 1.7e-173 613.6 629 51.4
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 6.4e-173 611.7 632 53.3
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 4.1e-172 609.0 617 52.8
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 5.4e-172 608.6 614 51.6
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 1.6e-171 607.1 631 51.0
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 4.6e-171 605.5 566 55.1
CSS0029044 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 1.0e-170 604.4 333 84.1
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 1.3e-170 604.0 551 54.1
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 1.7e-170 603.6 613 51.7
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 3.3e-169 599.4 620 51.0
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 5.6e-169 598.6 626 50.6
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 2.1e-168 596.7 551 53.0
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 3.6e-168 595.9 610 53.6
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 4.7e-168 595.5 628 51.1
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 6.2e-168 595.1 619 50.1
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 5.2e-167 592.0 620 50.3
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 4.4e-166 589.0 554 54.9
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 7.6e-166 588.2 610 52.1
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 7.6e-166 588.2 633 49.8
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 9.9e-166 587.8 619 49.6
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 3.8e-165 585.9 621 49.9
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 1.6e-163 580.5 614 50.3
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 3.5e-163 579.3 610 51.3
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.1e-161 574.3 616 52.3
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 5.6e-161 572.0 605 51.4
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 4.8e-160 568.9 614 48.9
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 6.2e-160 568.5 591 50.3
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 6.2e-160 568.5 622 49.7
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 9.0e-159 564.7 614 48.7
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 7.6e-158 561.6 613 48.3
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 9.3e-156 554.7 620 49.2
FvH4_6g53950 Fragaria vesca HOM05D005105 ORTHO05D006244 2.7e-155 553.1 370 71.4
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 7.9e-155 551.6 650 46.2
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 1.9e-153 547.0 621 49.9
Lj5A92G44 Lonicera japonica HOM05D005105 ORTHO05D006244 2.8e-152 543.1 334 75.7
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 1.7e-149 533.9 451 58.8
Dinv33309 Davidia involucrata HOM05D005105 ORTHO05D006244 3.5e-147 526.2 414 63.8
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 6.7e-146 521.9 624 48.1
CARHR148130 Cardamine hirsuta HOM05D005105 ORTHO05D006244 3.7e-144 516.2 387 60.2
Atru.chr6.2613 Acer truncatum HOM05D005105 ORTHO05D006244 2.7e-139 500.0 346 66.8
Eucgr.I01623 Eucalyptus grandis HOM05D005105 ORTHO05D006244 7.4e-137 491.9 350 66.0
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 6.3e-136 488.8 521 51.8
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 1.8e-135 487.3 627 44.7
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 2.0e-134 483.8 658 44.7
Actinidia18328 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.2e-131 474.6 267 83.5
MD17G1010700 Malus domestica HOM05D005105 ORTHO05D006244 1.8e-130 470.7 349 66.2
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 6.7e-130 468.8 524 50.8
CSS0048130 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 3.4e-126 456.4 347 63.7
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 5.9e-126 455.7 460 48.3
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 1.4e-124 451.1 541 47.3
Dinv23187 Davidia involucrata HOM05D005105 ORTHO05D006244 1.4e-119 434.5 257 80.9
HPP92_009891 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.8e-114 417.5 321 63.2
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 3.1e-111 406.8 550 43.8
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 9.1e-111 405.2 607 40.4
PGSC0003DMG400013660 Solanum tuberosum HOM05D005105 ORTHO05D006244 4.5e-110 402.9 302 62.6
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 6.5e-109 399.1 460 43.7
Sopen02g026870 Solanum pennellii HOM05D005105 ORTHO05D006244 8.5e-109 398.7 302 61.9
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 3.2e-108 396.7 618 40.5
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 3.2e-92 343.6 443 45.6
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 1.3e-88 331.6 300 54.7
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 8.3e-88 328.9 387 49.9
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 2.9e-85 320.5 327 56.9
TWI34G0688 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 5.2e-82 309.7 212 67.9
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 2.0e-70 271.2 454 33.5
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.5e-65 255.0 336 43.8
Actinidia25549 Actinidia chinensis HOM05D005105 ORTHO05D006244 2.2e-64 251.1 136 84.6
CDE05G2066 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 3.3e-60 237.3 146 76.0
Gohir.D09G039750 Gossypium hirsutum HOM05D005105 ORTHO05D006244 6.2e-59 233.0 162 67.9
HPP92_009897 Vanilla planifolia HOM05D005105 ORTHO05D006244 5.1e-45 186.8 288 39.2
FAN05G0264 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.9e-44 184.9 231 44.6
Actinidia25550 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.5e-41 175.3 150 57.3
CBR_g57654 Chara braunii HOM05D000004 ORTHO05D000002 3.4e-33 147.5 163 42.3
Dinv23186 Davidia involucrata HOM05D005105 ORTHO05D006244 3.8e-32 144.1 227 44.9
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 4.9e-32 143.7 207 43.0
Lj5A92G45 Lonicera japonica HOM05D005105 ORTHO05D006244 4.6e-30 137.1 123 54.5
Atru.chr6.2612 Acer truncatum HOM05D005105 ORTHO05D006244 1.3e-24 119.0 225 39.6
Glyma.19G097101 Glycine max HOM05D005105 ORTHO05D006244 2.7e-22 111.3 86 64.0
Ah.03g148260 Amaranthus hybridus HOM05D005105 ORTHO05D006244 5.1e-21 107.1 182 41.2
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 6.7e-21 106.7 219 39.3
Gohir.D09G039801 Gossypium hirsutum HOM05D005105 ORTHO05D006244 5.7e-20 103.6 237 35.9
Glyma.19G097001 Glycine max HOM05D005105 ORTHO05D006244 8.2e-19 99.8 58 79.3
HPP92_009880 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.5e-12 79.0 81 48.1
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 1.8e-10 72.0 193 33.2


User provided reference genes

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