Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 9.7e-127 456.8 231 100.0
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 3.9e-112 408.3 231 89.6
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 2.6e-95 352.4 228 79.8
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 2.6e-87 325.9 236 74.6
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 7.5e-87 324.3 236 74.2
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 1.6e-84 316.6 230 72.6
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 2.7e-84 315.8 229 73.4
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 1.2e-79 300.4 236 67.4
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 3.4e-79 298.9 229 70.3
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 4.4e-79 298.5 229 68.6
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 1.3e-78 297.0 229 69.0
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 3.7e-78 295.4 229 69.4
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 1.6e-76 290.0 235 65.5
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 2.0e-76 289.7 229 68.1
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 4.5e-76 288.5 233 65.2
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 4.5e-76 288.5 229 67.2
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 5.9e-76 288.1 222 67.6
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 7.8e-76 287.7 227 65.6
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 1.3e-75 287.0 222 67.6
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 1.7e-75 286.6 226 66.4
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 1.7e-75 286.6 229 65.5
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 3.8e-75 285.4 221 64.7
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 3.8e-75 285.4 188 76.6
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 5.0e-75 285.0 227 68.3
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.1e-74 283.9 194 75.3
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 1.9e-74 283.1 230 66.1
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 1.9e-74 283.1 198 72.2
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 3.3e-74 282.3 230 66.5
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 7.3e-74 281.2 207 69.6
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 2.1e-73 279.6 233 64.4
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 3.6e-73 278.9 230 64.8
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 3.6e-73 278.9 231 66.7
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 4.7e-73 278.5 229 64.6
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 2.3e-72 276.2 239 63.2
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 3.0e-72 275.8 229 63.3
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 5.2e-72 275.0 229 65.5
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 5.2e-72 275.0 231 63.6
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 5.2e-72 275.0 187 74.3
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.8e-72 274.6 231 63.2
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 6.8e-72 274.6 285 56.5
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 8.9e-72 274.2 231 63.6
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.2e-71 273.9 231 63.2
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 5.8e-71 271.6 222 64.9
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 1.3e-70 270.4 228 63.2
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 1.7e-70 270.0 217 66.4
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 2.2e-70 269.6 231 61.9
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 3.7e-70 268.9 195 69.7
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.7e-70 268.9 231 63.6
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 4.9e-70 268.5 202 67.8
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 1.4e-69 266.9 186 72.0
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 1.9e-69 266.5 225 64.0
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 3.2e-69 265.8 235 63.8
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 3.2e-69 265.8 220 65.0
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 4.1e-69 265.4 234 60.7
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 4.1e-69 265.4 214 65.9
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 5.4e-69 265.0 185 73.0
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 7.0e-69 264.6 189 73.5
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 9.2e-69 264.2 187 70.6
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 1.2e-68 263.8 204 67.6
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 3.5e-68 262.3 187 71.7
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 3.5e-68 262.3 171 74.9
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 7.8e-68 261.2 198 67.2
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 5.0e-67 258.5 195 68.2
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 9.5e-66 254.2 216 61.6
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 2.1e-65 253.1 155 74.8
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 3.6e-65 252.3 170 71.8
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 1.8e-64 250.0 216 60.6
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 3.1e-64 249.2 192 65.1
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 2.0e-63 246.5 243 58.8
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.3e-62 243.8 186 66.1
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 2.2e-62 243.0 265 52.5
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 8.3e-62 241.1 202 62.9
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 1.4e-61 240.4 191 62.3
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 1.9e-61 240.0 211 63.5
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 3.2e-61 239.2 231 57.6
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 5.4e-61 238.4 224 61.2
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 2.7e-60 236.1 187 65.8
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 7.8e-60 234.6 178 66.9
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 5.1e-59 231.9 178 65.7
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 6.6e-59 231.5 185 63.8
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 1.5e-58 230.3 176 66.5
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 2.5e-58 229.6 189 64.0
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 4.3e-58 228.8 190 63.2
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 4.3e-58 228.8 216 55.6
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 2.1e-57 226.5 201 60.7
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 2.1e-57 226.5 201 60.7
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 2.1e-57 226.5 148 73.0
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 1.1e-56 224.2 136 76.5
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 1.1e-56 224.2 256 50.0
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 1.2e-55 220.7 202 59.9
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 4.6e-44 182.2 228 50.4
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 1.6e-41 173.7 156 57.1
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 6.9e-40 168.3 162 53.1
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 6.4e-38 161.8 98 75.5
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 9.3e-37 157.9 98 74.5
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 2.3e-35 153.3 162 50.6
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 6.6e-35 151.8 140 61.4
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 9.0e-32 141.4 132 63.6
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 2.0e-31 140.2 173 46.2
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 9.9e-31 137.9 126 61.1
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 5.6e-26 122.1 100 70.0
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.6e-25 120.6 64 85.9
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 5.3e-24 115.5 125 59.2
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 2.9e-22 109.8 62 80.6
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 1.4e-21 107.5 113 54.0
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 1.9e-21 107.1 109 50.5
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 7.1e-13 78.6 81 54.3
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 9.3e-13 78.2 61 67.2
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 9.3e-13 78.2 61 63.9
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.0e-11 74.7 89 53.9
Cre17.g714900 Chlamydomonas reinhardtii HOM05D007115 ORTHO05D008923 1.1e-10 71.2 169 30.8
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 4.5e-07 59.3 83 38.6


User provided reference genes

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