Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18961 Vaccinium macrocarpon HOM05D000945 ORTHO05D426644 5.5e-116 421.0 217 100.0
vmacro15058 Vaccinium macrocarpon HOM05D000945 ORTHO05D000919 2.4e-26 123.2 118 58.5
vmacro15056 Vaccinium macrocarpon HOM05D000945 ORTHO05D000919 9.1e-10 68.2 90 50.0
TAR624G0552 Trochodendron aralioides HOM05D000945 ORTHO05D000919 5.9e-09 65.5 90 46.7
Cfa003507 Carpinus fangiana HOM05D000945 ORTHO05D000919 1.0e-08 64.7 90 46.7
CSS0001523 Camellia sinensis var. sinensis HOM05D000945 ORTHO05D016444 1.3e-08 64.3 69 52.2
CSS0023781 Camellia sinensis var. sinensis HOM05D000945 ORTHO05D000919 1.3e-08 64.3 90 46.7
CSS0030377 Camellia sinensis var. sinensis HOM05D000945 ORTHO05D016444 1.3e-08 64.3 69 52.2
CSS0035238 Camellia sinensis var. sinensis HOM05D000945 ORTHO05D016444 1.3e-08 64.3 69 52.2
Dinv37966 Davidia involucrata HOM05D000945 ORTHO05D000919 1.7e-08 63.9 90 46.7
QL09p027361 Quercus lobata HOM05D000945 ORTHO05D000919 2.2e-08 63.5 90 46.7
Haze_16070 Corylus avellana HOM05D000945 ORTHO05D000919 3.8e-08 62.8 90 44.4
Haze_16069 Corylus avellana HOM05D000945 ORTHO05D003600 5.0e-08 62.4 90 45.6
Sc15g0000620 Simmondsia chinensis HOM05D000945 ORTHO05D000919 5.0e-08 62.4 90 45.6
Actinidia32210 Actinidia chinensis HOM05D000945 ORTHO05D000919 6.5e-08 62.0 90 44.4
CSS0033932 Camellia sinensis var. sinensis HOM05D000945 ORTHO05D000919 6.5e-08 62.0 90 45.6
Cfa003505 Carpinus fangiana HOM05D000945 ORTHO05D003600 6.5e-08 62.0 90 44.4
Haze_16068 Corylus avellana HOM05D000945 ORTHO05D000919 6.5e-08 62.0 90 44.4
Duzib192G0328 Durio zibethinus HOM05D000945 ORTHO05D000919 6.5e-08 62.0 88 45.5
HanXRQChr12g0360171 Helianthus annuus HOM05D000945 ORTHO05D000919 6.5e-08 62.0 34 85.3
Manes.11G016200 Manihot esculenta HOM05D000945 ORTHO05D000919 6.5e-08 62.0 90 43.3
CSS0022477 Camellia sinensis var. sinensis HOM05D000945 ORTHO05D000919 8.5e-08 61.6 97 45.4
HanXRQChr10g0311871 Helianthus annuus HOM05D000945 ORTHO05D000919 1.1e-07 61.2 90 43.3
vmacro15057 Vaccinium macrocarpon HOM05D000945 ORTHO05D426577 1.1e-07 61.2 34 85.3
CSS0007164 Camellia sinensis var. sinensis HOM05D000945 ORTHO05D000919 1.4e-07 60.8 90 45.6
Cfa003506 Carpinus fangiana HOM05D000945 ORTHO05D000919 1.4e-07 60.8 34 79.4
QL05p003388 Quercus lobata HOM05D000945 ORTHO05D000919 1.4e-07 60.8 90 43.3
CSS0002156 Camellia sinensis var. sinensis HOM05D000945 ORTHO05D000919 1.9e-07 60.5 90 44.4
COL.COLO4_30809 Corchorus olitorius HOM05D000945 ORTHO05D000919 1.9e-07 60.5 90 44.4
Lsat_1_v5_gn_5_136860 Lactuca sativa HOM05D000945 ORTHO05D000919 1.9e-07 60.5 32 87.5
Cpa.g.sc25.151 Carica papaya HOM05D000945 ORTHO05D000919 2.5e-07 60.1 34 82.4
AUR62009924 Chenopodium quinoa HOM05D000945 ORTHO05D000919 2.5e-07 60.1 90 44.4
COL.COLO4_00212 Corchorus olitorius HOM05D000945 ORTHO05D000919 2.5e-07 60.1 34 79.4
ECA234G3038 Erigeron canadensis HOM05D000945 ORTHO05D000919 2.5e-07 60.1 34 79.4
Gorai.011G062400 Gossypium raimondii HOM05D000945 ORTHO05D000919 2.5e-07 60.1 90 44.4
Lsat_1_v5_gn_5_136840 Lactuca sativa HOM05D000945 ORTHO05D000919 2.5e-07 60.1 32 84.4
QL05p003548 Quercus lobata HOM05D000945 ORTHO05D000919 2.5e-07 60.1 90 43.3
QL05p003554 Quercus lobata HOM05D000945 ORTHO05D000919 2.5e-07 60.1 90 44.4
Thecc.06G125100 Theobroma cacao HOM05D000945 ORTHO05D000919 2.5e-07 60.1 90 43.3
Haze_16072 Corylus avellana HOM05D000945 ORTHO05D000919 3.2e-07 59.7 90 42.2
GSVIVG01016712001 Vitis vinifera HOM05D000945 ORTHO05D000919 3.2e-07 59.7 90 41.1
CiPaw.01G215700 Carya illinoinensis HOM05D000945 ORTHO05D016444 4.2e-07 59.3 32 81.2
HanXRQChr10g0311881 Helianthus annuus HOM05D000945 ORTHO05D000919 4.2e-07 59.3 34 79.4
Sabra03G0040800 Salix brachista HOM05D000945 ORTHO05D000919 4.2e-07 59.3 90 43.3
Sabra03G0040900 Salix brachista HOM05D000945 ORTHO05D000919 4.2e-07 59.3 90 43.3
Actinidia32209 Actinidia chinensis HOM05D000945 ORTHO05D016444 5.5e-07 58.9 32 87.5
CSS0021508 Camellia sinensis var. sinensis HOM05D000945 ORTHO05D000919 5.5e-07 58.9 97 44.3
PGR049G0007 Punica granatum HOM05D000945 ORTHO05D000919 5.5e-07 58.9 34 76.5
PGR119G0457 Punica granatum HOM05D000945 ORTHO05D000919 5.5e-07 58.9 34 76.5
QL05p003436 Quercus lobata HOM05D000945 ORTHO05D016444 5.5e-07 58.9 34 76.5
Atru.chr2.434_Atru.chr2.435 Acer truncatum HOM05D000945 ORTHO05D000919 7.2e-07 58.5 34 76.5
Atru.chr2.436 Acer truncatum HOM05D000945 ORTHO05D000919 7.2e-07 58.5 34 76.5
Ciclev10025729m.g Citrus clementina HOM05D000945 ORTHO05D000919 7.2e-07 58.5 34 76.5
Ciclev10025922m.g Citrus clementina HOM05D000945 ORTHO05D000919 7.2e-07 58.5 34 76.5
Gohir.D10G058300 Gossypium hirsutum HOM05D000945 ORTHO05D000919 7.2e-07 58.5 90 43.3
PSO724G1111 Papaver somniferum HOM05D000945 ORTHO05D000919 7.2e-07 58.5 88 40.9
Aqoxy1G02000 Aquilegia oxysepala HOM05D000945 ORTHO05D000919 9.4e-07 58.2 88 42.0
Gohir.A10G056200 Gossypium hirsutum HOM05D000945 ORTHO05D000919 9.4e-07 58.2 90 41.1
Gohir.A10G056400 Gossypium hirsutum HOM05D000945 ORTHO05D000919 9.4e-07 58.2 90 43.3
PGR049G0004 Punica granatum HOM05D000945 ORTHO05D000919 9.4e-07 58.2 90 42.2
PGR119G0676 Punica granatum HOM05D000945 ORTHO05D000919 9.4e-07 58.2 90 42.2
PGR119G1366 Punica granatum HOM05D000945 ORTHO05D000919 9.4e-07 58.2 90 42.2
CiPaw.01G215400 Carya illinoinensis HOM05D000945 ORTHO05D000919 1.2e-06 57.8 90 41.1
CiPaw.01G215500 Carya illinoinensis HOM05D000945 ORTHO05D000919 1.2e-06 57.8 90 41.1
CiPaw.01G215600 Carya illinoinensis HOM05D000945 ORTHO05D000919 1.2e-06 57.8 90 41.1
Gohir.A06G143100 Gossypium hirsutum HOM05D000945 ORTHO05D000919 1.2e-06 57.8 90 41.1
Gorai.010G174100 Gossypium raimondii HOM05D000945 ORTHO05D016444 1.2e-06 57.8 34 76.5
Potri.003G069300 Populus trichocarpa HOM05D000945 ORTHO05D000919 1.2e-06 57.8 90 42.2
Sc15g0000610 Simmondsia chinensis HOM05D000945 ORTHO05D000919 1.2e-06 57.8 90 42.2
COL.COLO4_00211 Corchorus olitorius HOM05D001787 ORTHO05D003488 1.6e-06 57.4 31 87.1
DCAR_026426 Daucus carota HOM05D000945 ORTHO05D000919 1.6e-06 57.4 34 82.4
Hma1.2p1_0090F.1_g046060 Hydrangea macrophylla HOM05D000945 ORTHO05D000919 1.6e-06 57.4 90 44.4
Hma1.2p1_0090F.1_g046070 Hydrangea macrophylla HOM05D000945 ORTHO05D000919 1.6e-06 57.4 90 44.4
QL05p003334 Quercus lobata HOM05D000945 ORTHO05D000919 1.6e-06 57.4 34 76.5
RcHm_v2.0_Chr2g0146451 Rosa chinensis HOM05D000945 ORTHO05D000919 1.6e-06 57.4 90 41.1
RcHm_v2.0_Chr2g0146471 Rosa chinensis HOM05D000945 ORTHO05D000919 1.6e-06 57.4 90 42.2
Thecc.06G125200 Theobroma cacao HOM05D000945 ORTHO05D000919 1.6e-06 57.4 90 41.1
GSVIVG01016714001 Vitis vinifera HOM05D000945 ORTHO05D000919 1.6e-06 57.4 90 42.2
Gohir.D10G058100 Gossypium hirsutum HOM05D000945 ORTHO05D000919 2.1e-06 57.0 88 40.9
Potri.003G069400 Populus trichocarpa HOM05D000945 ORTHO05D000919 2.1e-06 57.0 90 42.2
Potri.003G069600 Populus trichocarpa HOM05D000945 ORTHO05D000919 2.1e-06 57.0 90 42.2
CARHR089010 Cardamine hirsuta HOM05D000945 ORTHO05D000919 2.7e-06 56.6 90 41.1
PGR049G0003 Punica granatum HOM05D000945 ORTHO05D000919 2.7e-06 56.6 90 42.2
PGR119G0176 Punica granatum HOM05D000945 ORTHO05D000919 2.7e-06 56.6 90 42.2
PGR119G1013 Punica granatum HOM05D000945 ORTHO05D000919 2.7e-06 56.6 90 42.2
Thecc.06G125400 Theobroma cacao HOM05D000945 ORTHO05D000919 2.7e-06 56.6 87 43.7
HPP92_011069 Vanilla planifolia HOM05D000945 ORTHO05D000919 2.7e-06 56.6 87 44.8
Oeu000389.1 Olea europaea HOM05D000945 ORTHO05D000919 3.6e-06 56.2 90 44.4
PSO541G5584 Papaver somniferum HOM05D000945 ORTHO05D000919 3.6e-06 56.2 88 39.8
PSO781G0161 Papaver somniferum HOM05D000945 ORTHO05D000919 3.6e-06 56.2 88 39.8
Hund18670 Selenicereus undatus HOM05D000945 ORTHO05D000919 3.6e-06 56.2 90 41.1
EL10Ac7g16446 Beta vulgaris HOM05D000945 ORTHO05D000919 4.7e-06 55.8 88 43.2
CANSAT56G4292 Cannabis sativa HOM05D000945 ORTHO05D000919 4.7e-06 55.8 88 42.0
Nn7g37965 Nelumbo nucifera HOM05D000945 ORTHO05D000919 4.7e-06 55.8 90 37.8
Ah.15g095120 Amaranthus hybridus HOM05D000945 ORTHO05D000919 6.1e-06 55.5 90 41.1
Duzib235G0700 Durio zibethinus HOM05D000945 ORTHO05D000919 6.1e-06 55.5 34 73.5
FvH4_6g35190 Fragaria vesca HOM05D000945 ORTHO05D000919 6.1e-06 55.5 90 41.1
FAN14G1329 Fragaria x ananassa HOM05D000945 ORTHO05D000919 6.1e-06 55.5 90 41.1
Gohir.D06G149400 Gossypium hirsutum HOM05D000945 ORTHO05D000919 6.1e-06 55.5 34 73.5
Prupe.3G037200 Prunus persica HOM05D000945 ORTHO05D000919 6.1e-06 55.5 90 41.1
Sc15g0000600 Simmondsia chinensis HOM05D000945 ORTHO05D000919 6.1e-06 55.5 88 42.0
THA.LOC104822663 Tarenaya hassleriana HOM05D000945 ORTHO05D000919 6.1e-06 55.5 34 76.5
vmacro20267 Vaccinium macrocarpon HOM05D000945 ORTHO05D000919 6.1e-06 55.5 90 41.1
Ciclev10025921m.g Citrus clementina HOM05D000945 ORTHO05D000919 7.9e-06 55.1 34 73.5
Gorai.011G062200 Gossypium raimondii HOM05D000945 ORTHO05D000919 7.9e-06 55.1 90 40.0


User provided reference genes

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