Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18776 Vaccinium macrocarpon HOM05D006233 ORTHO05D007247 7.2e-65 250.4 122 100.0
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 5.6e-33 144.4 109 73.4
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 3.2e-28 128.6 94 67.0
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 6.9e-23 110.9 92 65.2
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.5e-22 109.8 93 61.3
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 3.4e-22 108.6 93 63.4
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 2.4e-20 102.4 93 54.8
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 4.6e-19 98.2 123 48.8
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 6.6e-18 94.4 97 55.7
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 9.6e-17 90.5 92 53.3
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 3.6e-16 88.6 93 52.7
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 1.1e-15 87.0 92 52.2
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 2.4e-15 85.9 94 50.0
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 1.5e-14 83.2 94 50.0
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 2.0e-14 82.8 93 50.5
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 7.6e-14 80.9 95 45.3
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 1.3e-13 80.1 100 44.0
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.7e-13 79.7 92 45.7
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 2.2e-13 79.3 95 45.3
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 4.9e-13 78.2 95 44.2
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 4.9e-13 78.2 95 44.2
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 4.9e-13 78.2 95 44.2
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 4.9e-13 78.2 93 48.4
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 4.9e-13 78.2 93 47.3
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 4.9e-13 78.2 93 46.2
QL05p010226 Quercus lobata HOM05D006233 ORTHO05D007247 6.4e-13 77.8 95 44.2
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 8.4e-13 77.4 95 44.2
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 8.4e-13 77.4 95 43.2
RcHm_v2.0_Chr5g0063721 Rosa chinensis HOM05D006233 ORTHO05D007247 1.4e-12 76.6 96 44.8
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 1.9e-12 76.3 93 47.3
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 3.2e-12 75.5 112 42.0
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 4.2e-12 75.1 94 46.8
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 4.2e-12 75.1 95 44.2
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 7.1e-12 74.3 93 45.2
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 1.2e-11 73.6 96 43.8
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 2.1e-11 72.8 94 45.7
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 2.7e-11 72.4 92 40.2
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 4.6e-11 71.6 93 47.3
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 1.0e-10 70.5 105 44.8
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 1.3e-10 70.1 93 41.9
A05p35530 Brassica napus HOM05D006233 ORTHO05D007247 1.8e-10 69.7 93 45.2
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 3.0e-10 68.9 93 44.1
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 3.0e-10 68.9 93 44.1
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 3.0e-10 68.9 92 40.2
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 3.9e-10 68.6 96 42.7
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 3.9e-10 68.6 93 40.9
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 6.7e-10 67.8 93 43.0
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 1.1e-09 67.0 93 39.8
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 1.1e-09 67.0 93 43.0
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 2.5e-09 65.9 93 43.0
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 2.5e-09 65.9 93 39.8
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 3.3e-09 65.5 93 41.9
Oeu011882.1 Olea europaea HOM05D006233 ORTHO05D007247 3.3e-09 65.5 97 42.3
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 4.3e-09 65.1 93 44.1
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 4.3e-09 65.1 92 40.2
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 5.6e-09 64.7 95 40.0
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 5.6e-09 64.7 93 41.9
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 5.6e-09 64.7 93 39.8
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 9.6e-09 63.9 97 41.2
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 9.6e-09 63.9 91 41.8
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 1.3e-08 63.5 93 40.9
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 1.3e-08 63.5 93 38.7
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 1.6e-08 63.2 93 39.8
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 1.6e-08 63.2 92 38.0
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 2.1e-08 62.8 94 43.6
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 2.8e-08 62.4 96 39.6
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 2.8e-08 62.4 92 44.6
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 3.7e-08 62.0 92 39.1
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 6.2e-08 61.2 93 40.9
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 6.2e-08 61.2 91 40.7
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 8.1e-08 60.8 93 40.9
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 8.1e-08 60.8 108 36.1
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 8.1e-08 60.8 91 40.7
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 1.1e-07 60.5 94 41.5
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 1.1e-07 60.5 94 41.5
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 1.4e-07 60.1 92 37.0
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 1.4e-07 60.1 104 35.6
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 1.8e-07 59.7 96 39.6
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 1.8e-07 59.7 93 39.8
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 1.8e-07 59.7 93 39.8
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 1.8e-07 59.7 96 39.6
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 1.8e-07 59.7 92 38.0
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 2.4e-07 59.3 94 39.4
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 2.4e-07 59.3 92 43.5
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 3.1e-07 58.9 99 40.4
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 3.1e-07 58.9 93 38.7
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 4.0e-07 58.5 50 58.0
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 4.0e-07 58.5 95 40.0
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 5.3e-07 58.2 95 40.0
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 9.0e-07 57.4 100 37.0
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 2.0e-06 56.2 103 39.8
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 2.0e-06 56.2 93 38.7
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 2.0e-06 56.2 92 40.2
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 3.4e-06 55.5 92 37.0
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 5.8e-06 54.7 100 38.0
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 7.6e-06 54.3 94 33.0
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 7.6e-06 54.3 92 34.8
Sed0004594 Sechium edule HOM05D006233 ORTHO05D007247 7.6e-06 54.3 92 34.8


User provided reference genes

Program Settings