Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 1.6e-212 742.7 421 100.0
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 1.9e-43 181.0 228 49.1
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 1.4e-35 154.8 131 54.2
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 3.2e-35 153.7 130 53.1
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 7.1e-35 152.5 123 55.3
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 2.7e-34 150.6 125 53.6
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 4.6e-34 149.8 130 56.2
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 6.0e-34 149.4 136 50.7
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 7.8e-34 149.1 130 56.2
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 1.0e-33 148.7 160 49.4
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 1.3e-33 148.3 123 52.0
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 1.7e-33 147.9 154 47.4
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 2.3e-33 147.5 136 50.7
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 3.0e-33 147.1 165 47.9
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 3.9e-33 146.7 133 48.1
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 5.1e-33 146.4 123 52.0
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 6.6e-33 146.0 161 47.2
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 6.6e-33 146.0 196 42.9
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 8.7e-33 145.6 120 53.3
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 1.9e-32 144.4 133 49.6
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 2.5e-32 144.1 199 41.2
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 2.5e-32 144.1 130 50.0
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 3.3e-32 143.7 125 52.8
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 4.3e-32 143.3 129 51.2
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 4.3e-32 143.3 160 48.1
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 4.3e-32 143.3 130 50.0
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 4.3e-32 143.3 154 46.8
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 4.3e-32 143.3 120 53.3
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 5.6e-32 142.9 120 54.2
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 7.3e-32 142.5 147 48.3
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 9.6e-32 142.1 188 43.1
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 1.3e-31 141.7 144 46.5
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 1.6e-31 141.4 125 50.4
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.6e-31 141.4 132 51.5
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 1.6e-31 141.4 120 50.8
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 2.1e-31 141.0 127 53.5
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 2.1e-31 141.0 143 46.2
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 2.1e-31 141.0 120 53.3
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 2.8e-31 140.6 143 49.0
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 2.8e-31 140.6 135 48.9
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 3.6e-31 140.2 130 50.8
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 4.8e-31 139.8 149 49.0
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 6.2e-31 139.4 156 47.4
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 8.1e-31 139.0 131 50.4
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 8.1e-31 139.0 130 51.5
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 8.1e-31 139.0 130 50.8
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 8.1e-31 139.0 130 51.5
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 8.1e-31 139.0 130 51.5
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 2.4e-30 137.5 141 49.6
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 2.4e-30 137.5 133 51.1
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 3.1e-30 137.1 128 52.3
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 5.3e-30 136.3 120 52.5
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 5.3e-30 136.3 132 48.5
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 9.0e-30 135.6 223 39.5
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 2.0e-29 134.4 131 50.4
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 2.6e-29 134.0 121 52.1
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.6e-29 134.0 121 52.1
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.4e-29 133.7 121 51.2
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 3.4e-29 133.7 131 50.4
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 4.5e-29 133.3 207 44.4
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 4.5e-29 133.3 128 50.0
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 4.5e-29 133.3 208 38.5
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 7.6e-29 132.5 158 45.6
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 9.9e-29 132.1 121 51.2
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 1.3e-28 131.7 136 45.6
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.3e-28 131.7 121 51.2
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 1.7e-28 131.3 160 46.2
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 1.7e-28 131.3 157 43.9
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 2.2e-28 131.0 180 41.1
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 3.8e-28 130.2 125 46.4
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 4.9e-28 129.8 204 38.7
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 6.4e-28 129.4 198 39.4
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 8.4e-28 129.0 121 51.2
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 1.4e-27 128.3 132 47.7
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 1.2e-26 125.2 122 45.1
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 6.0e-26 122.9 198 39.4
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 1.0e-25 122.1 107 54.2
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 1.8e-25 121.3 125 46.4
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 2.3e-25 120.9 126 47.6
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 1.1e-24 118.6 107 54.2
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 3.3e-24 117.1 109 52.3
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 7.4e-24 115.9 123 43.9
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 7.4e-24 115.9 120 45.8
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 1.3e-23 115.2 128 43.0
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 2.8e-23 114.0 126 45.2
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 1.1e-22 112.1 106 50.0
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 3.4e-21 107.1 107 47.7
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 9.9e-21 105.5 120 40.8
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 1.1e-19 102.1 123 43.1
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 7.9e-18 95.9 134 36.6
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 3.3e-16 90.5 127 39.4
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 2.8e-15 87.4 114 41.2
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 8.2e-15 85.9 86 47.7
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 9.0e-14 82.4 107 43.0
Rhsim07G0074400 Rhododendron simsii HOM05D009871 ORTHO05D011190 2.6e-13 80.9 51 82.4
vmacro13814 Vaccinium macrocarpon HOM05D009871 ORTHO05D011190 1.0e-12 79.0 52 82.7


User provided reference genes

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