Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 3.6e-312 1074.7 533 100.0
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 1.9e-279 965.3 539 89.2
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 9.1e-237 823.5 542 75.3
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 5.7e-215 751.1 506 73.5
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 9.8e-207 723.8 539 65.7
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 4.2e-202 708.4 538 65.1
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 6.1e-201 704.5 536 65.9
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 2.0e-199 699.5 538 65.2
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 3.4e-199 698.7 538 62.8
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 2.4e-197 692.6 540 63.1
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 4.5e-196 688.3 530 63.4
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.9e-195 685.6 539 62.0
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 3.3e-194 682.2 565 60.9
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 3.3e-194 682.2 539 63.1
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 5.6e-194 681.4 543 61.5
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 7.3e-194 681.0 539 63.5
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 1.0e-192 677.2 539 62.9
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 3.1e-192 675.6 541 62.7
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 6.8e-192 674.5 534 62.2
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 8.9e-192 674.1 542 62.7
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 8.9e-192 674.1 496 66.3
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 2.0e-191 672.9 546 62.5
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 2.9e-190 669.1 542 62.7
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 1.1e-189 667.2 543 62.2
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 1.4e-189 666.8 539 63.3
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 1.4e-189 666.8 542 61.4
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 4.1e-189 665.2 535 60.2
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 5.4e-189 664.8 541 60.3
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 2.7e-188 662.5 540 62.4
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 1.3e-187 660.2 537 60.0
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 8.6e-187 657.5 541 61.9
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 5.6e-186 654.8 536 59.9
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 7.3e-186 654.4 542 62.2
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 1.8e-184 649.8 532 60.0
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 1.8e-184 649.8 539 59.9
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 2.3e-184 649.4 541 60.8
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 3.1e-184 649.0 540 58.9
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 8.9e-184 647.5 535 60.6
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 1.5e-183 646.7 549 59.7
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 1.7e-182 643.3 539 60.9
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 2.4e-181 639.4 543 60.2
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 1.2e-180 637.1 539 59.7
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 1.2e-180 637.1 538 60.2
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 2.1e-180 636.3 535 63.7
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 8.6e-179 630.9 536 58.6
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 5.6e-178 628.2 635 53.5
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 4.7e-177 625.2 545 57.8
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 6.2e-177 624.8 541 59.9
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 1.4e-176 623.6 762 45.9
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 3.1e-176 622.5 541 57.3
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 1.5e-175 620.2 537 57.9
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 1.3e-174 617.1 540 56.3
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 2.9e-174 615.9 532 57.5
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 8.3e-174 614.4 531 57.6
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 8.3e-174 614.4 536 56.3
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 1.9e-173 613.2 532 57.3
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 2.4e-173 612.8 536 56.9
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 4.1e-173 612.1 537 56.6
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 7.1e-173 611.3 532 57.1
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 9.2e-173 610.9 528 57.8
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 3.5e-172 609.0 528 57.6
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 1.3e-171 607.1 537 55.3
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 3.9e-171 605.5 539 55.8
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 1.1e-170 604.0 539 57.3
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 2.5e-170 602.8 543 56.2
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 3.3e-170 602.4 535 55.9
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 9.5e-170 600.9 532 58.5
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.1e-169 599.7 532 58.3
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 1.1e-168 597.4 538 56.5
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 5.2e-168 595.1 530 56.8
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 2.2e-166 589.7 538 55.9
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 3.2e-165 585.9 485 60.4
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 9.2e-165 584.3 577 52.2
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 4.6e-164 582.0 538 56.3
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 8.7e-163 577.8 538 54.8
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 3.3e-162 575.9 532 56.6
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 2.0e-159 566.6 367 72.2
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 4.4e-159 565.5 538 53.7
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 1.3e-158 563.9 542 55.9
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 9.6e-154 547.7 488 56.8
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 9.6e-154 547.7 475 57.9
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 6.2e-153 545.0 532 55.5
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 5.3e-152 542.0 536 53.2
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 5.8e-151 538.5 542 53.9
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 1.3e-150 537.3 510 53.9
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 6.4e-150 535.0 474 57.2
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 1.1e-149 534.3 537 51.6
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 5.8e-135 485.3 542 49.8
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 7.9e-132 474.9 456 52.9
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 4.5e-119 432.6 539 44.2
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 4.4e-114 416.0 536 42.5
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 7.7e-111 405.2 476 48.7
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 1.3e-110 404.4 259 71.0
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 1.1e-109 401.4 537 41.3
VMungo0331G0057 Vigna mungo HOM05D006671 ORTHO05D008637 2.2e-105 387.1 293 63.8
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 3.7e-105 386.3 379 52.8
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 1.5e-101 374.4 259 69.5
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 5.2e-91 339.3 272 64.7
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 1.1e-88 331.6 286 58.7
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 1.2e-87 328.2 533 34.9
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 1.6e-87 327.8 282 61.0
Gohir.A13G116750 Gossypium hirsutum HOM05D006671 ORTHO05D008637 1.2e-76 291.6 201 66.2
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.6e-76 291.2 312 49.4
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 6.2e-76 289.3 261 60.2
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 7.5e-74 282.3 499 37.3
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 4.4e-66 256.5 197 68.0
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 7.5e-66 255.8 445 38.2
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 1.6e-63 248.1 268 51.5
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 7.8e-63 245.7 265 49.8
THA.LOC104803433 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 8.1e-60 235.7 180 61.1
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 1.7e-41 174.9 430 30.9
Actinidia21852 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.1e-40 172.2 126 68.3
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.4e-40 171.8 284 39.8
Hund05690 Selenicereus undatus HOM05D006671 ORTHO05D008637 3.6e-36 157.1 125 64.0
FAN05G4676 Fragaria x ananassa HOM05D006671 ORTHO05D008637 4.3e-21 107.1 111 55.9
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 7.4e-21 106.3 140 43.6
Cfa022026 Carpinus fangiana HOM05D002393 ORTHO05D123579 1.6e-20 105.1 484 24.8
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 3.5e-15 87.4 142 38.0
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 3.5e-15 87.4 142 38.0
Lsat_1_v5_gn_2_91241 Lactuca sativa HOM05D006671 ORTHO05D011576 3.0e-14 84.3 83 49.4
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 2.5e-13 81.3 104 43.3
Lsat_1_v5_gn_1_119700 Lactuca sativa HOM05D006671 ORTHO05D011576 2.2e-12 78.2 118 37.3
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 4.5e-10 70.5 366 23.0
CSS0027715 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 1.0e-09 69.3 42 71.4
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 7.2e-08 63.2 426 23.0
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 1.6e-07 62.0 324 22.2
BcaB07g33306 Brassica carinata HOM05D000305 ORTHO05D000065 3.0e-06 57.8 50 58.0


User provided reference genes

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