Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18688 Vaccinium macrocarpon HOM05D006319 ORTHO05D007963 9.0e-148 526.9 275 100.0
Actinidia16521 Actinidia chinensis HOM05D006319 ORTHO05D007963 1.5e-89 333.6 254 72.4
CSS0021790 Camellia sinensis var. sinensis HOM05D006319 ORTHO05D007963 3.3e-89 332.4 254 70.9
Dinv05221 Davidia involucrata HOM05D006319 ORTHO05D007963 2.9e-77 292.7 258 62.4
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla HOM05D006319 ORTHO05D007963 1.4e-76 290.4 253 64.0
Potri.007G100800 Populus trichocarpa HOM05D006319 ORTHO05D007963 2.3e-74 283.1 231 64.1
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 1.1e-73 280.8 220 66.8
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 1.9e-73 280.0 217 67.3
Eucgr.H05122 Eucalyptus grandis HOM05D006319 ORTHO05D007963 4.3e-73 278.9 189 74.6
PGR102G0633 Punica granatum HOM05D006319 ORTHO05D007963 2.8e-72 276.2 195 70.3
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 4.7e-72 275.4 189 72.5
Thecc.01G138200 Theobroma cacao HOM05D006319 ORTHO05D007963 6.2e-72 275.0 223 63.7
CiPaw.04G079200 Carya illinoinensis HOM05D006319 ORTHO05D007963 4.0e-71 272.3 264 55.7
Prupe.4G276300 Prunus persica HOM05D006319 ORTHO05D007963 1.5e-70 270.4 202 67.8
Lj7A582T32 Lonicera japonica HOM05D006319 ORTHO05D007963 2.0e-70 270.0 163 81.6
COL.COLO4_35821 Corchorus olitorius HOM05D006319 ORTHO05D007963 3.4e-70 269.2 185 71.9
QL10p041175 Quercus lobata HOM05D006319 ORTHO05D007963 1.3e-69 267.3 188 69.1
Duzib187G0662 Durio zibethinus HOM05D006319 ORTHO05D007963 4.9e-69 265.4 204 66.7
GSVIVG01022331001 Vitis vinifera HOM05D006319 ORTHO05D007963 6.4e-69 265.0 190 69.5
TWI31G0926 Tripterygium wilfordii HOM05D006319 ORTHO05D007963 8.4e-69 264.6 199 68.8
Atru.chr4.1000 Acer truncatum HOM05D006319 ORTHO05D007963 1.4e-68 263.8 221 60.2
Manes.12G159300 Manihot esculenta HOM05D006319 ORTHO05D007963 1.9e-68 263.5 208 63.5
TAR628G0979 Trochodendron aralioides HOM05D006319 ORTHO05D007963 1.9e-68 263.5 223 62.8
Psat5g060360 Pisum sativum HOM05D006319 ORTHO05D007963 3.2e-68 262.7 225 61.3
AUR62000524 Chenopodium quinoa HOM05D006319 ORTHO05D007963 7.1e-68 261.5 202 68.3
Glyma.06G156100 Glycine max HOM05D006319 ORTHO05D007963 9.3e-68 261.2 191 68.1
Nn1g08971 Nelumbo nucifera HOM05D006319 ORTHO05D007963 9.3e-68 261.2 222 60.4
VMungo0464G0362 Vigna mungo HOM05D006319 ORTHO05D007963 9.3e-68 261.2 231 59.3
Phvul.009G154200 Phaseolus vulgaris HOM05D006319 ORTHO05D007963 1.2e-67 260.8 189 67.7
Ciclev10002322m.g Citrus clementina HOM05D006319 ORTHO05D007963 1.6e-67 260.4 189 68.8
PGSC0003DMG400032538 Solanum tuberosum HOM05D006319 ORTHO05D007963 2.1e-67 260.0 225 60.4
MD01G1000300 Malus domestica HOM05D006319 ORTHO05D007963 2.7e-67 259.6 208 63.9
CANSAT01G1475 Cannabis sativa HOM05D006319 ORTHO05D007963 3.5e-67 259.2 234 61.1
AUR62006869 Chenopodium quinoa HOM05D006319 ORTHO05D007963 4.6e-67 258.8 192 69.8
Hund07232 Selenicereus undatus HOM05D006319 ORTHO05D007963 6.0e-67 258.5 195 67.7
Solyc04g009420.3 Solanum lycopersicum HOM05D006319 ORTHO05D007963 6.0e-67 258.5 199 63.8
RcHm_v2.0_Chr2g0122611 Rosa chinensis HOM05D006319 ORTHO05D007963 7.8e-67 258.1 188 69.1
Aqoxy6G00315 Aquilegia oxysepala HOM05D006319 ORTHO05D007963 1.0e-66 257.7 252 58.7
Lalb_Chr08g0238171 Lupinus albus HOM05D006319 ORTHO05D007963 1.3e-66 257.3 227 58.1
QL10p041464 Quercus lobata HOM05D006319 ORTHO05D007963 1.7e-66 256.9 163 73.6
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea HOM05D006319 ORTHO05D007963 5.1e-66 255.4 244 57.4
Gorai.011G118400 Gossypium raimondii HOM05D006319 ORTHO05D007963 5.1e-66 255.4 209 63.6
Lj1g0009956 Lotus japonicus HOM05D006319 ORTHO05D007963 5.1e-66 255.4 183 67.2
FvH4_1g24980 Fragaria vesca HOM05D006319 ORTHO05D007963 1.9e-65 253.4 187 68.4
Cpa.g.sc37.12 Carica papaya HOM05D006319 ORTHO05D007963 3.3e-65 252.7 219 61.2
Medtr3g096750 Medicago truncatula HOM05D006319 ORTHO05D007963 3.3e-65 252.7 231 58.0
Glyma.04G209900 Glycine max HOM05D006319 ORTHO05D007963 4.3e-65 252.3 164 73.2
MSTRG.23490 Avicennia marina HOM05D006319 ORTHO05D007963 5.6e-65 251.9 189 65.6
Nitab4.5_0013462g0010 Nicotiana tabacum HOM05D006319 ORTHO05D007963 7.3e-65 251.5 187 66.8
Sopen04g004550 Solanum pennellii HOM05D006319 ORTHO05D007963 7.3e-65 251.5 194 63.9
Nitab4.5_0004105g0090 Nicotiana tabacum HOM05D006319 ORTHO05D007963 9.6e-65 251.1 224 58.5
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea HOM05D006319 ORTHO05D007963 1.3e-64 250.8 208 63.0
Cc02_g33910 Coffea canephora HOM05D006319 ORTHO05D007963 1.3e-64 250.8 216 62.0
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea HOM05D006319 ORTHO05D007963 2.1e-64 250.0 236 58.9
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea HOM05D006319 ORTHO05D007963 2.8e-64 249.6 258 54.7
FAN23G2801 Fragaria x ananassa HOM05D006319 ORTHO05D007963 4.8e-64 248.8 187 67.4
Oeu011026.1 Olea europaea HOM05D006319 ORTHO05D007963 1.8e-63 246.9 255 53.3
BcaB01g03112 Brassica carinata HOM05D006319 ORTHO05D007963 6.9e-63 245.0 222 58.6
DCAR_009594 Daucus carota HOM05D006319 ORTHO05D007963 1.5e-62 243.8 193 65.8
Migut.H00824 Erythranthe guttata HOM05D006319 ORTHO05D007963 2.6e-62 243.0 188 63.3
MBI06_g35206_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 2.6e-62 243.0 221 58.8
unitig_899.g15151 Utricularia gibba HOM05D006319 ORTHO05D007963 2.6e-62 243.0 189 62.4
CAN.G186.2 Capsicum annuum HOM05D006319 ORTHO05D007963 4.4e-62 242.3 227 57.7
FAN19G2853 Fragaria x ananassa HOM05D006319 ORTHO05D007963 4.4e-62 242.3 263 54.4
Sc02g0003550 Simmondsia chinensis HOM05D006319 ORTHO05D007963 4.4e-62 242.3 187 64.7
EL10Ac4g09632 Beta vulgaris HOM05D006319 ORTHO05D007963 9.9e-62 241.1 190 63.7
SalBow1G4836 Salvia bowleyana HOM05D006319 ORTHO05D007963 9.9e-62 241.1 166 71.1
BolC4t27297H Brassica oleracea HOM05D006319 ORTHO05D007963 1.3e-61 240.7 188 62.8
PSO782G1065 Papaver somniferum HOM05D006319 ORTHO05D007963 1.3e-61 240.7 198 64.1
Thhalv10017176m.g Eutrema salsugineum HOM05D006319 ORTHO05D007963 1.7e-61 240.4 188 64.9
Sp4g11430 Schrenkiella parvula HOM05D006319 ORTHO05D007963 1.7e-61 240.4 221 58.8
BcaC02g08157 Brassica carinata HOM05D006319 ORTHO05D007963 2.9e-61 239.6 224 57.1
C04p57790 Brassica napus HOM05D006319 ORTHO05D007963 2.9e-61 239.6 224 57.1
A04p21670 Brassica napus HOM05D006319 ORTHO05D007963 6.4e-61 238.4 222 57.2
THA.LOC104826346 Tarenaya hassleriana HOM05D006319 ORTHO05D007963 6.4e-61 238.4 190 62.6
C03p31420 Brassica napus HOM05D006319 ORTHO05D007963 8.4e-61 238.0 226 57.1
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 1.1e-60 237.7 223 58.3
BcaB06g28232 Brassica carinata HOM05D006319 ORTHO05D007963 1.1e-60 237.7 190 64.2
FAN28G2219 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.1e-60 237.7 195 62.6
BraA04t17731Z Brassica rapa HOM05D006319 ORTHO05D007963 1.4e-60 237.3 190 64.7
BcaC01g04984 Brassica carinata HOM05D006319 ORTHO05D007963 1.9e-60 236.9 186 65.1
A03p26290 Brassica napus HOM05D006319 ORTHO05D007963 7.1e-60 235.0 218 56.9
Zm00001eb422700 Zea mays HOM05D006319 ORTHO05D007963 2.7e-59 233.0 160 68.8
BraA03t11843Z Brassica rapa HOM05D006319 ORTHO05D007963 6.0e-59 231.9 218 56.4
CDE08G0565 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 6.0e-59 231.9 222 56.8
BolC3t15489H Brassica oleracea HOM05D006319 ORTHO05D007963 1.3e-58 230.7 161 68.3
Carub.0004s0957 Capsella rubella HOM05D006319 ORTHO05D007963 1.7e-58 230.3 215 57.2
SGA_v2.0_scaffold273G46467 Striga asiatica HOM05D006319 ORTHO05D007963 2.3e-58 229.9 224 54.5
AL4G23100 Arabidopsis lyrata HOM05D006319 ORTHO05D007963 3.0e-58 229.6 229 56.3
CARHR121630 Cardamine hirsuta HOM05D006319 ORTHO05D007963 3.0e-58 229.6 215 57.2
Ah.06g191080 Amaranthus hybridus HOM05D006319 ORTHO05D007963 5.1e-58 228.8 214 58.4
ECA246G1987 Erigeron canadensis HOM05D000001 ORTHO05D000003 6.6e-58 228.4 225 54.7
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 6.6e-58 228.4 187 66.8
AT2G28605 Arabidopsis thaliana HOM05D006319 ORTHO05D007963 8.7e-58 228.0 188 62.8
HanXRQChr12g0378071 Helianthus annuus HOM05D006319 ORTHO05D007963 5.6e-57 225.3 225 56.9
ATR0584G200 Amborella trichopoda HOM05D006319 ORTHO05D007963 2.1e-56 223.4 156 68.6
Eucgr.H02106 Eucalyptus grandis HOM05D006319 ORTHO05D007963 6.2e-56 221.9 189 64.6
HPP92_009279 Vanilla planifolia HOM05D006319 ORTHO05D007963 5.8e-54 215.3 189 57.7
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea HOM05D006319 ORTHO05D007963 6.4e-53 211.8 205 56.6
Peaxi162Scf00842g00214 Petunia axillaris HOM05D006319 ORTHO05D007963 2.1e-51 206.8 136 71.3
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea HOM05D006319 ORTHO05D007963 5.1e-50 202.2 164 61.6
Potri.005G068500 Populus trichocarpa HOM05D006319 ORTHO05D007963 2.0e-46 190.3 246 48.4
SEGI_06099 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 7.6e-46 188.3 156 57.7
SEGI_37383 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 7.6e-46 188.3 156 57.7
Lsat_1_v5_gn_5_34560 Lactuca sativa HOM05D006319 ORTHO05D007963 1.0e-42 177.9 156 61.5
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis HOM05D006319 ORTHO05D007963 5.7e-41 172.2 159 51.6
Pp3c8_18060 Physcomitrium patens HOM05D006319 ORTHO05D007963 5.7e-41 172.2 154 55.2
Gohir.D10G108000 Gossypium hirsutum HOM05D006319 ORTHO05D007963 5.5e-36 155.6 209 45.0
Gohir.A10G068160 Gossypium hirsutum HOM05D006319 ORTHO05D007963 1.8e-34 150.6 204 44.6
SMO117G0258 Selaginella moellendorffii HOM05D006319 ORTHO05D007963 1.1e-33 147.9 166 44.0
Mapoly0092s0018 Marchantia polymorpha HOM05D006319 ORTHO05D007963 2.8e-32 143.3 156 46.8
CBR_g49982 Chara braunii HOM05D006319 ORTHO05D007963 1.1e-31 141.4 141 48.9
Ca_16986_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 1.1e-31 141.4 93 71.0
TPR.G10777 Trifolium pratense HOM05D006319 ORTHO05D007963 7.7e-30 135.2 85 74.1
FAN23G0464 Fragaria x ananassa HOM05D006319 ORTHO05D007963 8.5e-29 131.7 82 75.6
Cre16.g678851 Chlamydomonas reinhardtii HOM05D006319 ORTHO05D007963 2.7e-27 126.7 156 41.0
FAN26G1803 Fragaria x ananassa HOM05D001650 ORTHO05D001592 6.1e-27 125.6 87 66.7
Manes.12G147800 Manihot esculenta HOM05D006319 ORTHO05D007963 2.5e-25 120.2 116 56.0
TPR.G33590 Trifolium pratense HOM05D001650 ORTHO05D001592 9.7e-25 118.2 140 47.9
arahy.Tifrunner.gnm1.ann1.PNID9I Arachis hypogaea HOM05D006319 ORTHO05D007963 3.1e-23 113.2 153 45.8
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 5.3e-23 112.5 96 56.2
arahy.Tifrunner.gnm1.ann1.949H7S Arachis hypogaea HOM05D006319 ORTHO05D007963 4.5e-22 109.4 122 50.0
arahy.Tifrunner.gnm1.ann1.Q7YENP Arachis hypogaea HOM05D006319 ORTHO05D007963 4.5e-22 109.4 150 46.0
Os04g0434900 Oryza sativa ssp. japonica HOM05D006319 ORTHO05D007963 1.9e-20 104.0 69 69.6
arahy.Tifrunner.gnm1.ann1.RE08FE Arachis hypogaea HOM05D006319 ORTHO05D007963 6.1e-19 99.0 133 44.4
MCO01G211 Micromonas commoda HOM05D006319 ORTHO05D007963 3.0e-18 96.7 188 32.4
arahy.Tifrunner.gnm1.ann1.I50TU7 Arachis hypogaea HOM05D006319 ORTHO05D007963 1.3e-13 81.3 118 43.2
CDE08G0611 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 1.9e-12 77.4 83 55.4
PRCOL_00004434 Prasinoderma coloniale HOM05D006319 ORTHO05D007963 4.7e-11 72.8 114 39.5
MBI11_g02539_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 1.8e-10 70.9 119 42.0
MBI17_g01556_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 6.3e-08 62.4 79 45.6
SalBow5G2350 Salvia bowleyana HOM05D006608 ORTHO05D008316 7.7e-06 55.5 138 26.8


User provided reference genes

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