Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 1.5e-124 449.5 231 100.0
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 5.3e-101 371.3 231 84.4
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 7.5e-87 324.3 234 73.9
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 9.8e-87 323.9 241 73.9
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 1.2e-84 317.0 231 72.3
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 4.2e-82 308.5 231 71.4
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 5.7e-79 298.1 234 70.9
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 1.1e-77 293.9 234 67.9
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 1.0e-75 287.3 236 69.5
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 4.3e-74 282.0 243 65.8
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 1.6e-73 280.0 241 63.5
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 4.7e-73 278.5 241 64.7
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 6.1e-73 278.1 251 62.2
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 3.0e-72 275.8 236 65.3
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 2.6e-71 272.7 242 62.8
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 3.4e-71 272.3 221 66.1
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 1.3e-70 270.4 201 68.7
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 1.3e-70 270.4 249 63.1
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 1.9e-69 266.5 251 61.4
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 2.4e-69 266.2 201 69.2
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 4.1e-69 265.4 228 63.6
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 4.1e-69 265.4 159 84.9
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 5.4e-69 265.0 236 64.8
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 1.2e-68 263.8 253 60.5
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 1.6e-68 263.5 250 60.0
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 2.0e-68 263.1 211 65.9
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 4.6e-68 261.9 245 62.4
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 4.6e-68 261.9 189 72.0
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 6.0e-68 261.5 187 73.3
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 2.3e-67 259.6 209 65.1
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 3.0e-67 259.2 154 83.8
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 3.0e-67 259.2 238 61.3
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 3.0e-67 259.2 238 61.3
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 3.9e-67 258.8 216 63.9
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 6.6e-67 258.1 215 66.5
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 6.6e-67 258.1 236 60.2
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 6.6e-67 258.1 189 69.8
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 8.6e-67 257.7 240 60.4
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 1.1e-66 257.3 244 60.7
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.9e-66 256.5 244 61.1
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 2.5e-66 256.1 210 63.8
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.3e-66 255.8 189 68.8
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 3.3e-66 255.8 224 62.5
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 5.6e-66 255.0 240 59.6
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 7.3e-66 254.6 156 80.1
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 9.5e-66 254.2 244 60.7
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 2.1e-65 253.1 188 69.1
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 2.8e-65 252.7 239 59.4
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 4.7e-65 251.9 236 61.4
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 6.2e-65 251.5 235 61.7
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 1.8e-64 250.0 234 60.3
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 4.4e-63 245.4 187 67.4
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 1.3e-62 243.8 151 78.8
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.7e-62 242.3 229 59.4
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 5.4e-61 238.4 231 60.6
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.1e-60 236.5 292 50.0
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 2.1e-60 236.5 232 59.5
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 8.6e-59 231.1 227 59.9
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 4.3e-58 228.8 159 72.3
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 3.7e-54 215.7 224 56.2
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 3.1e-48 196.1 154 63.6
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 6.8e-48 194.9 154 63.0
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 1.5e-47 193.7 234 50.4
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 6.0e-44 181.8 138 63.0
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 2.1e-41 173.3 96 83.3
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 4.6e-36 155.6 240 45.0
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 1.5e-31 140.6 89 78.7
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.8e-27 127.1 135 51.1
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.1e-25 120.2 135 48.9
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 9.3e-21 104.8 137 40.9
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 2.6e-15 86.7 103 46.6
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 7.6e-15 85.1 101 48.5
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.7e-14 84.0 46 84.8
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.7e-14 84.0 99 47.5
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 6.5e-14 82.0 58 72.4
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 8.4e-14 81.6 47 80.9
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 9.3e-13 78.2 47 76.6
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 7.9e-12 75.1 128 42.2
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.0e-11 74.7 47 76.6
Pp3c2_6800 Physcomitrium patens HOM05D019817 ORTHO05D016515 2.6e-07 60.1 179 27.9
Mapoly0178s0020 Marchantia polymorpha HOM05D019817 ORTHO05D016515 6.5e-06 55.5 90 33.3
SEGI_14611 Sequoiadendron giganteum HOM05D019817 ORTHO05D016515 8.5e-06 55.1 94 30.9


User provided reference genes

Program Settings