Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 6.2e-67 257.3 127 100.0
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 1.7e-61 239.2 127 90.6
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.3e-61 238.8 123 92.7
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 1.1e-60 236.5 127 88.2
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.5e-60 236.1 127 88.2
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 1.5e-60 236.1 127 89.8
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 1.9e-60 235.7 127 88.2
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 4.3e-60 234.6 125 88.0
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 5.6e-60 234.2 126 88.1
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 5.6e-60 234.2 126 87.3
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 1.2e-59 233.0 125 88.0
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 1.2e-59 233.0 127 86.6
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.6e-59 232.6 127 85.8
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 3.6e-59 231.5 126 87.3
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 3.6e-59 231.5 127 85.8
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 6.2e-59 230.7 125 84.8
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 8.1e-59 230.3 127 84.3
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 8.1e-59 230.3 125 84.0
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 8.1e-59 230.3 127 86.6
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 8.1e-59 230.3 125 85.6
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 1.4e-58 229.6 127 84.3
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.4e-58 229.6 127 84.3
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 1.8e-58 229.2 127 83.5
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 1.8e-58 229.2 125 85.6
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.4e-58 228.8 125 83.2
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 3.1e-58 228.4 127 85.8
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 3.1e-58 228.4 127 85.0
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 4.0e-58 228.0 121 88.4
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 4.0e-58 228.0 121 88.4
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 4.0e-58 228.0 127 85.0
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 4.0e-58 228.0 123 86.2
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 5.2e-58 227.6 127 84.3
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 5.2e-58 227.6 127 83.5
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 6.8e-58 227.3 127 84.3
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 6.8e-58 227.3 126 83.3
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 6.8e-58 227.3 127 84.3
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 8.9e-58 226.9 126 84.1
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 8.9e-58 226.9 127 84.3
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 1.2e-57 226.5 126 83.3
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 1.2e-57 226.5 127 85.8
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.2e-57 226.5 127 85.8
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.2e-57 226.5 127 85.8
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.2e-57 226.5 127 85.8
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.2e-57 226.5 127 85.8
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 1.5e-57 226.1 126 83.3
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 2.0e-57 225.7 123 87.8
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 2.6e-57 225.3 125 83.2
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 2.6e-57 225.3 125 82.4
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 2.6e-57 225.3 127 82.7
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 2.6e-57 225.3 125 82.4
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 3.4e-57 224.9 127 83.5
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.4e-57 224.9 127 83.5
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 3.4e-57 224.9 125 86.4
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 3.4e-57 224.9 127 85.0
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 3.4e-57 224.9 127 82.7
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 5.8e-57 224.2 125 86.4
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 7.6e-57 223.8 126 81.0
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 7.6e-57 223.8 125 85.6
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 9.9e-57 223.4 125 81.6
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 1.3e-56 223.0 126 82.5
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 1.7e-56 222.6 127 81.9
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 1.7e-56 222.6 127 83.5
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 1.7e-56 222.6 127 85.8
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.7e-56 222.6 127 83.5
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 2.2e-56 222.2 126 81.0
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.2e-56 222.2 125 80.8
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 2.9e-56 221.9 125 82.4
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 2.9e-56 221.9 125 82.4
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 2.9e-56 221.9 123 82.9
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 3.8e-56 221.5 127 81.1
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 4.9e-56 221.1 126 81.7
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 4.9e-56 221.1 126 81.7
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 4.9e-56 221.1 126 81.7
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 4.9e-56 221.1 126 81.7
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 4.9e-56 221.1 127 81.1
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 6.4e-56 220.7 123 82.1
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 6.4e-56 220.7 123 82.1
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 8.4e-56 220.3 123 82.9
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.1e-55 219.9 125 79.2
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 1.4e-55 219.5 123 82.1
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 1.9e-55 219.2 126 80.2
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.9e-55 219.2 127 81.9
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 2.4e-55 218.8 123 84.6
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 2.4e-55 218.8 127 80.3
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 2.4e-55 218.8 126 81.0
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 2.4e-55 218.8 123 82.1
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 3.2e-55 218.4 128 78.9
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 3.2e-55 218.4 125 79.2
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 3.2e-55 218.4 127 78.7
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 3.2e-55 218.4 126 81.7
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 3.2e-55 218.4 123 81.3
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 4.1e-55 218.0 123 81.3
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 5.4e-55 217.6 127 81.1
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 5.4e-55 217.6 123 82.1
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 5.4e-55 217.6 123 82.1
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 7.1e-55 217.2 125 79.2
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 9.2e-55 216.9 123 82.9
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 1.6e-54 216.1 126 79.4
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 1.6e-54 216.1 126 78.6
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 1.6e-54 216.1 123 79.7
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 1.6e-54 216.1 123 80.5
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 2.1e-54 215.7 127 80.3
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 2.1e-54 215.7 123 80.5
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 3.5e-54 214.9 123 82.1
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 3.5e-54 214.9 126 78.6
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 6.0e-54 214.2 123 78.0
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 7.8e-54 213.8 123 78.0
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 1.0e-53 213.4 126 77.8
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.0e-53 213.4 126 79.4
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 1.0e-53 213.4 123 80.5
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.3e-53 213.0 115 86.1
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 1.3e-53 213.0 122 77.0
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 3.0e-53 211.8 123 80.5
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 3.0e-53 211.8 123 78.9
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 5.1e-53 211.1 126 77.0
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.5e-52 209.5 115 82.6
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 2.5e-52 208.8 125 79.2
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 1.6e-51 206.1 123 76.4
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 2.1e-51 205.7 125 74.4
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 1.1e-50 203.4 125 72.8
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 5.2e-50 201.1 107 88.8
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 5.2e-50 201.1 125 74.4
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 1.5e-49 199.5 110 84.5
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 2.0e-49 199.1 123 75.6
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 3.4e-49 198.4 107 86.9
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 5.8e-49 197.6 115 83.5
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 6.4e-48 194.1 112 79.5
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.1e-47 193.4 125 72.8
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 1.9e-47 192.6 118 74.6
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 5.4e-47 191.0 111 83.8
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 9.3e-47 190.3 124 75.0
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 1.6e-46 189.5 112 77.7
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 2.7e-46 188.7 124 66.9
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 1.0e-45 186.8 126 71.4
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.0e-45 186.8 103 83.5
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 1.3e-45 186.4 102 90.2
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 3.0e-45 185.3 101 87.1
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 3.0e-45 185.3 134 69.4
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 4.8e-43 177.9 107 81.3
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.1e-42 176.8 100 86.0
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.4e-42 176.4 98 83.7
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 1.5e-41 172.9 102 83.3
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.0e-41 172.6 98 86.7
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 1.9e-39 166.0 120 64.2
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 1.2e-38 163.3 127 59.8
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 1.8e-37 159.5 124 58.1
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 2.3e-37 159.1 88 79.5
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 2.5e-36 155.6 131 59.5
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 7.6e-33 144.1 119 54.6
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.4e-31 139.0 91 73.6
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 1.6e-30 136.3 126 55.6
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 1.5e-28 129.8 122 51.6
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 7.6e-25 117.5 108 56.5
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 1.7e-24 116.3 57 86.0
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 4.9e-24 114.8 114 54.4
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 2.7e-22 109.0 126 46.0
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 1.3e-21 106.7 62 82.3
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 5.1e-21 104.8 121 43.0
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 5.7e-20 101.3 94 51.1
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 1.3e-19 100.1 79 53.2
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.4e-15 86.7 47 85.1
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 1.7e-11 73.2 35 97.1
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 4.5e-09 65.1 32 84.4
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 1.9e-07 59.7 35 74.3
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 9.4e-07 57.4 33 72.7


User provided reference genes

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