Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18633 Vaccinium macrocarpon HOM05D006515 ORTHO05D008125 2.2e-199 698.7 353 100.0
Rhsim08G0006500 Rhododendron simsii HOM05D006515 ORTHO05D008125 5.5e-57 225.7 135 88.9
Rhsim08G0007200 Rhododendron simsii HOM05D006515 ORTHO05D008125 8.0e-56 221.9 135 87.4
GSVIVG01022225001 Vitis vinifera HOM05D006515 ORTHO05D008125 8.6e-50 201.8 134 77.6
CiPaw.04G091900 Carya illinoinensis HOM05D006515 ORTHO05D008125 4.2e-49 199.5 125 83.2
Nn5g28914 Nelumbo nucifera HOM05D006515 ORTHO05D008125 1.6e-48 197.6 134 74.6
Glyma.08G141400 Glycine max HOM05D006515 ORTHO05D008125 8.0e-48 195.3 127 81.1
MBI02_g20709_MAGBIO Magnolia biondii HOM05D006515 ORTHO05D008125 8.0e-48 195.3 123 81.3
MBI02_g45733_MAGBIO Magnolia biondii HOM05D006515 ORTHO05D008125 8.0e-48 195.3 123 81.3
Cfa002752 Carpinus fangiana HOM05D006515 ORTHO05D008125 1.0e-47 194.9 127 80.3
Haze_25038 Corylus avellana HOM05D006515 ORTHO05D008125 1.0e-47 194.9 136 75.0
Phvul.002G264700 Phaseolus vulgaris HOM05D006515 ORTHO05D008125 1.0e-47 194.9 127 81.1
TAR628G1388 Trochodendron aralioides HOM05D006515 ORTHO05D008125 3.0e-47 193.4 134 76.1
Lj4g0022266 Lotus japonicus HOM05D006515 ORTHO05D008125 6.8e-47 192.2 130 78.5
TWI74G0473 Tripterygium wilfordii HOM05D006515 ORTHO05D008125 2.0e-46 190.7 125 80.8
Potri.005G084400 Populus trichocarpa HOM05D006515 ORTHO05D008125 2.6e-46 190.3 126 79.4
VMungo0251G1698 Vigna mungo HOM05D006515 ORTHO05D008125 2.6e-46 190.3 128 79.7
Ca_17696_v3 Cicer arietinum L. HOM05D006515 ORTHO05D008125 9.8e-46 188.3 105 88.6
Migut.H02429 Erythranthe guttata HOM05D006515 ORTHO05D008125 2.2e-45 187.2 129 77.5
CsaV3_2G017540 Cucumis sativus L. HOM05D006515 ORTHO05D008125 2.8e-45 186.8 118 80.5
Eucgr.I00323 Eucalyptus grandis HOM05D006515 ORTHO05D008125 2.8e-45 186.8 111 85.6
MELO3C020948.2 Cucumis melo HOM05D006515 ORTHO05D008125 3.7e-45 186.4 118 80.5
QL06p032194 Quercus lobata HOM05D006515 ORTHO05D008125 8.3e-45 185.3 121 81.0
Oeu028372.3 Olea europaea HOM05D006515 ORTHO05D008125 1.1e-44 184.9 114 80.7
Lj4A877G29 Lonicera japonica HOM05D006515 ORTHO05D008125 1.4e-44 184.5 133 75.9
Lalb_Chr12g0203541 Lupinus albus HOM05D006515 ORTHO05D008125 1.4e-44 184.5 131 74.0
PGR004G2121 Punica granatum HOM05D006515 ORTHO05D008125 1.8e-44 184.1 111 82.0
Sabra05G0069400 Salix brachista HOM05D006515 ORTHO05D008125 2.4e-44 183.7 130 75.4
Cc07_g16230 Coffea canephora HOM05D006515 ORTHO05D008125 3.1e-44 183.3 114 81.6
TPR.G34384 Trifolium pratense HOM05D006515 ORTHO05D008125 4.1e-44 183.0 115 82.6
arahy.Tifrunner.gnm1.ann1.L5WCB3 Arachis hypogaea HOM05D006515 ORTHO05D008125 5.4e-44 182.6 134 72.4
Psat7g051400 Pisum sativum HOM05D006515 ORTHO05D008125 5.4e-44 182.6 104 86.5
TPR.G2156 Trifolium pratense HOM05D006515 ORTHO05D008125 5.4e-44 182.6 115 82.6
CSS0008392 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 2.7e-43 180.3 106 87.7
COL.COLO4_11014 Corchorus olitorius HOM05D006515 ORTHO05D008125 3.5e-43 179.9 123 82.1
Manes.12G142600 Manihot esculenta HOM05D006515 ORTHO05D008125 3.5e-43 179.9 103 88.3
Nitab4.5_0000431g0160 Nicotiana tabacum HOM05D006515 ORTHO05D008125 4.5e-43 179.5 112 83.9
Nitab4.5_0013619g0010 Nicotiana tabacum HOM05D005315 ORTHO05D008125 4.5e-43 179.5 109 86.2
FvH4_1g22260 Fragaria vesca HOM05D006515 ORTHO05D008125 7.8e-43 178.7 119 79.0
HanXRQChr15g0484391 Helianthus annuus HOM05D006515 ORTHO05D008125 7.8e-43 178.7 131 72.5
RcHm_v2.0_Chr2g0116401 Rosa chinensis HOM05D006515 ORTHO05D008125 7.8e-43 178.7 121 78.5
Duzib264G0250 Durio zibethinus HOM05D006515 ORTHO05D008125 1.0e-42 178.3 119 82.4
Aqoxy6G00481 Aquilegia oxysepala HOM05D006515 ORTHO05D008125 2.3e-42 177.2 134 70.9
THA.LOC104807722 Tarenaya hassleriana HOM05D006515 ORTHO05D008125 2.9e-42 176.8 123 74.0
Gohir.D03G046000 Gossypium hirsutum HOM05D006515 ORTHO05D008125 3.8e-42 176.4 120 80.8
Gorai.003G047200 Gossypium raimondii HOM05D006515 ORTHO05D008125 3.8e-42 176.4 120 80.8
SGA_v2.0_scaffold51G18748 Striga asiatica HOM05D006515 ORTHO05D008125 3.8e-42 176.4 129 74.4
Thecc.01G112600 Theobroma cacao HOM05D006515 ORTHO05D008125 3.8e-42 176.4 130 73.1
MD15G1333200 Malus domestica HOM05D006515 ORTHO05D008125 5.0e-42 176.0 133 71.4
Sed0016096 Sechium edule HOM05D006515 ORTHO05D008125 5.0e-42 176.0 105 85.7
Atru.chr4.394 Acer truncatum HOM05D006515 ORTHO05D008125 6.6e-42 175.6 123 76.4
MSTRG.2534 Avicennia marina HOM05D006515 ORTHO05D008125 1.5e-41 174.5 99 87.9
FAN19G0752 Fragaria x ananassa HOM05D006515 ORTHO05D008125 1.9e-41 174.1 140 70.7
CANSAT01G1885 Cannabis sativa HOM05D006515 ORTHO05D008125 4.3e-41 172.9 107 84.1
ECA238G1556 Erigeron canadensis HOM05D006515 ORTHO05D008125 5.6e-41 172.6 106 82.1
CSS0014645 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 9.5e-41 171.8 96 90.6
BolC4t26701H Brassica oleracea HOM05D006515 ORTHO05D008125 1.2e-40 171.4 99 87.9
Peaxi162Scf00133g01415 Petunia axillaris HOM05D006515 ORTHO05D008125 1.6e-40 171.0 109 83.5
BraA04t17291Z Brassica rapa HOM05D006515 ORTHO05D008125 4.7e-40 169.5 99 86.9
BcaB06g27799 Brassica carinata HOM05D006515 ORTHO05D008125 8.0e-40 168.7 99 85.9
BcaC02g08749 Brassica carinata HOM05D006515 ORTHO05D008125 1.0e-39 168.3 99 86.9
PGSC0003DMG400023598 Solanum tuberosum HOM05D006515 ORTHO05D008125 1.8e-39 167.5 108 78.7
A04p16560 Brassica napus HOM05D006515 ORTHO05D008125 2.3e-39 167.2 99 85.9
Ciclev10026110m.g Citrus clementina HOM05D006515 ORTHO05D008125 3.0e-39 166.8 113 79.6
HPP92_004318 Vanilla planifolia HOM05D006515 ORTHO05D008125 3.0e-39 166.8 105 79.0
Sopen04g006040 Solanum pennellii HOM05D006515 ORTHO05D008125 5.2e-39 166.0 108 78.7
CAN.G1056.2 Capsicum annuum HOM05D006515 ORTHO05D008125 6.8e-39 165.6 93 88.2
Hund19656 Selenicereus undatus HOM05D006515 ORTHO05D008125 6.8e-39 165.6 99 79.8
Solyc04g011900.4 Solanum lycopersicum HOM05D006515 ORTHO05D008125 6.8e-39 165.6 110 77.3
ATR0564G276 Amborella trichopoda HOM05D000080 ORTHO05D008125 8.9e-39 165.2 106 78.3
PSO675G2678 Papaver somniferum HOM05D006515 ORTHO05D008125 1.2e-38 164.9 110 75.5
Zm00001eb069020 Zea mays HOM05D006515 ORTHO05D008125 1.2e-38 164.9 107 79.4
Thhalv10000230m.g Eutrema salsugineum HOM05D006515 ORTHO05D008125 1.5e-38 164.5 99 82.8
FAN28G2568 Fragaria x ananassa HOM05D006515 ORTHO05D008125 1.5e-38 164.5 153 62.7
Sp4g01040 Schrenkiella parvula HOM05D006515 ORTHO05D008125 1.5e-38 164.5 97 84.5
AL4G11280 Arabidopsis lyrata HOM05D006515 ORTHO05D008125 2.6e-38 163.7 107 78.5
Aa31LG7G14680 Aethionema arabicum HOM05D006515 ORTHO05D008125 3.4e-38 163.3 92 89.1
C04p51080 Brassica napus HOM05D006515 ORTHO05D008125 5.7e-38 162.5 112 77.7
CARHR113040 Cardamine hirsuta HOM05D006515 ORTHO05D008125 7.5e-38 162.2 96 84.4
EL10Ac6g14754 Beta vulgaris HOM05D006515 ORTHO05D008125 9.8e-38 161.8 98 80.6
AT2G21960 Arabidopsis thaliana HOM05D006515 ORTHO05D008125 1.3e-37 161.4 97 83.5
PSO541G0558 Papaver somniferum HOM05D006515 ORTHO05D008125 1.3e-37 161.4 110 73.6
Carub.0004s0110 Capsella rubella HOM05D006515 ORTHO05D008125 4.9e-37 159.5 97 82.5
CDE04G2056 Ceratophyllum demersum HOM05D006515 ORTHO05D008125 6.4e-37 159.1 105 76.2
AUR62003307 Chenopodium quinoa HOM05D006515 ORTHO05D008125 6.4e-37 159.1 113 72.6
AUR62016278 Chenopodium quinoa HOM05D006515 ORTHO05D008125 6.4e-37 159.1 98 79.6
unitig_899.g15001 Utricularia gibba HOM05D006515 ORTHO05D008125 1.8e-36 157.5 110 71.8
Sc07g0001530 Simmondsia chinensis HOM05D006515 ORTHO05D008125 2.4e-36 157.1 101 79.2
Ah.02g125970 Amaranthus hybridus HOM05D006515 ORTHO05D008125 2.7e-35 153.7 92 81.5
SalBow6G3287 Salvia bowleyana HOM05D006515 ORTHO05D008125 2.5e-33 147.1 80 86.2
Cpa.g.sc196.13 Carica papaya HOM05D006515 ORTHO05D008125 4.3e-33 146.4 83 85.5
arahy.Tifrunner.gnm1.ann1.M7EXEZ Arachis hypogaea HOM05D006515 ORTHO05D008125 5.2e-31 139.4 138 58.0
SEGI_30317 Sequoiadendron giganteum HOM05D006515 ORTHO05D008125 5.2e-31 139.4 82 80.5
DCAR_010076 Daucus carota HOM05D006515 ORTHO05D008125 2.6e-30 137.1 85 80.0
Lsat_1_v5_gn_1_15020 Lactuca sativa HOM05D006515 ORTHO05D008125 2.6e-30 137.1 110 67.3
FAN26G2558 Fragaria x ananassa HOM05D006515 ORTHO05D008125 4.4e-30 136.3 98 73.5
ClCG02G013380 Citrullus lanatus HOM05D006515 ORTHO05D008125 7.5e-30 135.6 146 56.2
Actinidia28893 Actinidia chinensis HOM05D006515 ORTHO05D008125 4.1e-28 129.8 143 56.6
SMO356G0225 Selaginella moellendorffii HOM05D006515 ORTHO05D008125 2.3e-26 124.0 81 74.1
FAN23G2782 Fragaria x ananassa HOM05D006515 ORTHO05D008125 3.9e-26 123.2 77 83.1
AagrBONN_evm.TU.Sc2ySwM_344.4911 Anthoceros agrestis HOM05D006515 ORTHO05D008125 1.4e-23 114.8 101 56.4
Mapoly0125s0032 Marchantia polymorpha HOM05D006515 ORTHO05D008125 1.4e-23 114.8 105 61.0
Pp3c15_14640 Physcomitrium patens HOM05D006515 ORTHO05D008125 4.1e-20 103.2 119 49.6
CSS0007670 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 1.5e-17 94.7 48 97.9
CSS0013135 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 1.5e-17 94.7 48 97.9
Dinv19488 Davidia involucrata HOM05D006515 ORTHO05D008125 1.5e-17 94.7 48 97.9
Gohir.A02G135100 Gossypium hirsutum HOM05D006515 ORTHO05D008125 4.3e-17 93.2 48 95.8
Prupe.6G173100 Prunus persica HOM05D006515 ORTHO05D008125 2.1e-16 90.9 48 91.7
Os09g0436500 Oryza sativa ssp. japonica HOM05D006515 ORTHO05D008125 1.3e-13 81.6 50 76.0
Cre08.g379200 Chlamydomonas reinhardtii HOM05D006515 ORTHO05D008125 1.2e-11 75.1 80 53.8
Duzib264G0715 Durio zibethinus HOM05D006515 ORTHO05D008125 3.5e-11 73.6 52 73.1
MBI06_g27505_MAGBIO Magnolia biondii HOM05D006515 ORTHO05D008125 1.7e-10 71.2 71 54.9
HPP92_004304 Vanilla planifolia HOM05D006515 ORTHO05D008125 5.2e-07 59.7 82 46.3


User provided reference genes

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