Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18627 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 2.8e-123 445.3 226 100.0
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 4.2e-50 202.2 280 46.8
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 1.2e-41 174.1 244 44.3
vmacro01780 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 4.6e-41 172.2 91 90.1
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 1.8e-40 170.2 257 43.6
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 1.3e-30 137.5 244 38.1
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 2.2e-30 136.7 244 38.1
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 6.3e-30 135.2 242 38.4
vmacro01782 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 9.1e-29 131.3 132 58.3
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 1.6e-28 130.6 256 37.5
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 1.0e-27 127.9 256 36.7
Lj9A311T56 Lonicera japonica HOM05D002759 ORTHO05D003290 9.4e-26 121.3 246 35.4
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 1.0e-24 117.9 245 34.7
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 4.0e-24 115.9 254 33.9
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 6.7e-24 115.2 245 33.9
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 3.3e-23 112.8 269 32.7
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 9.7e-23 111.3 244 34.4
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 9.7e-23 111.3 246 35.0
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 1.7e-22 110.5 244 34.4
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 4.8e-22 109.0 243 32.5
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 6.3e-22 108.6 248 33.1
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 8.2e-22 108.2 247 33.2
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 1.1e-21 107.8 244 34.4
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 1.4e-21 107.5 248 33.1
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 2.4e-21 106.7 246 32.1
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 2.4e-21 106.7 242 32.2
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 4.1e-21 105.9 191 40.3
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 4.1e-21 105.9 191 40.3
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 5.3e-21 105.5 244 33.2
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 5.3e-21 105.5 246 33.3
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 5.3e-21 105.5 246 33.3
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 1.2e-20 104.4 241 33.6
Gohir.D01G167432 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.2e-20 104.4 283 32.9
Gohir.A01G176651 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.6e-20 104.0 283 33.6
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 2.0e-20 103.6 269 31.6
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 2.7e-20 103.2 244 32.4
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 3.5e-20 102.8 233 33.0
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 3.5e-20 102.8 233 33.0
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 4.5e-20 102.4 233 33.0
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 4.5e-20 102.4 283 32.5
FAN04G1156 Fragaria x ananassa HOM05D002759 ORTHO05D003290 5.9e-20 102.1 237 31.6
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 1.7e-19 100.5 247 32.4
MSTRG.16534 Avicennia marina HOM05D002759 ORTHO05D003290 3.8e-19 99.4 245 32.7
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 3.8e-19 99.4 251 31.9
Cpa.g.sc148.32 Carica papaya HOM05D002759 ORTHO05D003290 5.0e-19 99.0 243 33.7
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 8.5e-19 98.2 233 33.0
GSVIVG01005672001 Vitis vinifera HOM05D002759 ORTHO05D003290 1.5e-18 97.4 95 53.7
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 1.9e-18 97.1 220 33.2
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 1.9e-18 97.1 242 34.7
FAN13G1302 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.5e-18 96.7 247 30.8
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 2.5e-18 96.7 243 30.9
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 2.5e-18 96.7 244 31.1
MD15G1419000 Malus domestica HOM05D002759 ORTHO05D003290 5.5e-18 95.5 229 29.3
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 5.5e-18 95.5 106 50.0
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 7.2e-18 95.1 271 32.1
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 9.4e-18 94.7 244 31.1
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 9.4e-18 94.7 224 31.2
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 3.6e-17 92.8 274 31.0
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 4.7e-17 92.4 286 29.4
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 6.1e-17 92.0 249 30.9
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 8.0e-17 91.7 239 31.0
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 8.0e-17 91.7 244 30.3
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 5.2e-16 89.0 244 30.3
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 5.2e-16 89.0 236 31.8
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 8.8e-16 88.2 239 28.9
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 2.0e-15 87.0 244 29.5
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 2.0e-15 87.0 234 32.1
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 3.4e-15 86.3 236 32.2
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 4.4e-15 85.9 239 29.7
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 5.7e-15 85.5 275 28.4
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 5.7e-15 85.5 275 28.4
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 7.5e-15 85.1 245 29.0
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 7.5e-15 85.1 234 32.5
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 7.5e-15 85.1 234 32.5
GSVIVG01038033001 Vitis vinifera HOM05D002759 ORTHO05D003290 1.3e-14 84.3 68 60.3
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 1.7e-14 84.0 275 28.4
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 1.7e-14 84.0 275 28.4
GSVIVG01011206001 Vitis vinifera HOM05D002759 ORTHO05D003290 1.7e-14 84.0 67 61.2
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 2.8e-14 83.2 244 28.7
GSVIVG01032173001 Vitis vinifera HOM05D002759 ORTHO05D003290 2.8e-14 83.2 78 51.3
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 3.7e-14 82.8 236 28.8
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 1.1e-13 81.3 245 27.8
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 1.1e-13 81.3 245 27.8
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 1.1e-13 81.3 110 43.6
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 1.4e-13 80.9 245 27.8
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 2.4e-13 80.1 241 30.7
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 2.4e-13 80.1 245 27.8
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 2.4e-13 80.1 267 28.8
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 3.1e-13 79.7 233 30.9
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 3.1e-13 79.7 233 30.9
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 3.1e-13 79.7 245 26.9
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 3.1e-13 79.7 69 50.7
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 3.1e-13 79.7 74 52.7
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 5.4e-13 79.0 247 27.9
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 1.6e-12 77.4 241 29.5
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 1.6e-12 77.4 245 30.2
CARHR230010 Cardamine hirsuta HOM05D002759 ORTHO05D003290 1.6e-12 77.4 244 28.3
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 1.6e-12 77.4 80 47.5
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 2.0e-12 77.0 288 25.7
ATR0661G182 Amborella trichopoda HOM05D002759 ORTHO05D003290 1.0e-11 74.7 110 39.1
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 2.2e-11 73.6 240 27.5
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 2.2e-11 73.6 234 29.1
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 3.8e-11 72.8 242 28.5
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 6.5e-11 72.0 240 30.0
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 1.1e-10 71.2 239 29.7
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 3.2e-10 69.7 75 49.3
Actinidia00221 Actinidia chinensis HOM05D002759 ORTHO05D003290 4.2e-10 69.3 64 64.1
CSS0008587 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D024697 1.2e-09 67.8 54 64.8
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.2e-09 67.8 237 28.3
CSS0010724 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D024697 1.6e-09 67.4 54 64.8
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 2.1e-09 67.0 235 29.4
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 6.1e-09 65.5 62 51.6
CDE09G0711 Ceratophyllum demersum HOM05D002759 ORTHO05D003290 1.0e-08 64.7 106 34.9
CSS0002368 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D024697 4.0e-08 62.8 42 73.8
SHI26609 Sapria himalayana HOM05D002759 ORTHO05D003290 5.2e-08 62.4 68 44.1
CARHR254480 Cardamine hirsuta HOM05D002759 ORTHO05D003290 8.8e-08 61.6 114 37.7
vmacro20280 Vaccinium macrocarpon HOM05D002119 ORTHO05D002209 2.0e-07 60.5 73 52.1
MD08G1226600 Malus domestica HOM05D002759 ORTHO05D003290 7.5e-07 58.5 85 47.1
arahy.Tifrunner.gnm1.ann1.JK8JKR Arachis hypogaea HOM05D002759 ORTHO05D003290 9.8e-07 58.2 59 44.1
Rhsim05G0216000 Rhododendron simsii HOM05D002119 ORTHO05D002209 1.3e-06 57.8 73 49.3
Os02g0770700 Oryza sativa ssp. japonica HOM05D002759 ORTHO05D003290 1.7e-06 57.4 108 31.5
CSS0004127 Camellia sinensis var. sinensis HOM05D002119 ORTHO05D002209 3.7e-06 56.2 73 46.6
CSS0010393 Camellia sinensis var. sinensis HOM05D002119 ORTHO05D002209 3.7e-06 56.2 74 45.9
RhsimUnG0048500 Rhododendron simsii HOM05D002119 ORTHO05D002209 3.7e-06 56.2 69 55.1
RcHm_v2.0_Chr7g0177921 Rosa chinensis HOM05D002759 ORTHO05D003290 6.3e-06 55.5 233 25.8


User provided reference genes

Program Settings