Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18624 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 1.7e-143 512.7 259 100.0
vmacro21317 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 6.6e-116 421.0 247 89.5
Rhsim05G0180000 Rhododendron simsii HOM05D004487 ORTHO05D005483 5.3e-89 331.6 237 77.6
GSVIVG01022203001 Vitis vinifera HOM05D004487 ORTHO05D005483 9.3e-78 294.3 243 64.6
Nn2g14563 Nelumbo nucifera HOM05D004487 ORTHO05D005483 5.3e-73 278.5 238 63.9
Nn8g40276 Nelumbo nucifera HOM05D004487 ORTHO05D005483 5.3e-73 278.5 239 63.2
CSS0025780 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.3e-71 273.9 245 66.5
QL06p033465 Quercus lobata HOM05D004487 ORTHO05D005483 2.9e-71 272.7 233 63.9
Nitab4.5_0007717g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 4.2e-70 268.9 235 60.0
Haze_05964 Corylus avellana HOM05D004487 ORTHO05D005483 5.5e-70 268.5 268 58.2
TAR625G1215 Trochodendron aralioides HOM05D004487 ORTHO05D005483 6.0e-69 265.0 244 61.5
CiPaw.04G093900 Carya illinoinensis HOM05D004487 ORTHO05D005483 7.9e-69 264.6 243 62.1
COL.COLO4_11036 Corchorus olitorius HOM05D004487 ORTHO05D005483 1.3e-68 263.8 238 60.9
Nitab4.5_0001495g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 3.0e-68 262.7 235 59.6
MD01G1016500 Malus domestica HOM05D004487 ORTHO05D005483 1.5e-67 260.4 243 60.1
Ciclev10026392m.g Citrus clementina HOM05D004487 ORTHO05D005483 1.9e-67 260.0 228 60.1
Thecc.01G110300 Theobroma cacao HOM05D004487 ORTHO05D005483 1.9e-67 260.0 243 58.8
MELO3C007790.2 Cucumis melo HOM05D004487 ORTHO05D005483 5.6e-67 258.5 232 62.1
Manes.12G140400 Manihot esculenta HOM05D004487 ORTHO05D005483 9.6e-67 257.7 243 61.7
CsaV3_6G045820 Cucumis sativus L. HOM05D004487 ORTHO05D005483 1.3e-66 257.3 232 61.6
Prupe.8G078400 Prunus persica HOM05D004487 ORTHO05D005483 2.1e-66 256.5 223 64.1
Gohir.A11G053300 Gossypium hirsutum HOM05D004487 ORTHO05D005483 3.7e-66 255.8 243 58.0
CAN.G861.28 Capsicum annuum HOM05D004487 ORTHO05D005483 6.2e-66 255.0 203 65.5
Duzib147G1438 Durio zibethinus HOM05D004487 ORTHO05D005483 6.2e-66 255.0 237 59.1
MD15G1334800 Malus domestica HOM05D004487 ORTHO05D005483 2.4e-65 253.1 223 61.0
Gorai.007G062000 Gossypium raimondii HOM05D004487 ORTHO05D005483 3.1e-65 252.7 243 58.4
Peaxi162Scf00171g00006 Petunia axillaris HOM05D004487 ORTHO05D005483 3.1e-65 252.7 235 56.6
Atru.chr3.204 Acer truncatum HOM05D004487 ORTHO05D005483 6.9e-65 251.5 227 60.4
Oeu040918.3 Olea europaea HOM05D004487 ORTHO05D005483 1.2e-64 250.8 291 51.9
Sopen03g029710 Solanum pennellii HOM05D004487 ORTHO05D005483 2.0e-64 250.0 217 61.3
Migut.H01422 Erythranthe guttata HOM05D004487 ORTHO05D005483 2.6e-64 249.6 229 58.1
Gohir.D11G056800 Gossypium hirsutum HOM05D004487 ORTHO05D005483 1.0e-63 247.7 243 56.8
CsaV3_5G036000 Cucumis sativus L. HOM05D004487 ORTHO05D005483 1.3e-63 247.3 242 57.9
CANSAT01G2370 Cannabis sativa HOM05D004487 ORTHO05D005483 1.7e-63 246.9 244 58.6
ClCG01G019130 Citrullus lanatus HOM05D004487 ORTHO05D005483 1.7e-63 246.9 225 60.0
PGSC0003DMG400015213 Solanum tuberosum HOM05D004487 ORTHO05D005483 1.7e-63 246.9 217 60.4
MSTRG.14740 Avicennia marina HOM05D004487 ORTHO05D005483 2.9e-63 246.1 229 57.6
Solyc03g019910.3 Solanum lycopersicum HOM05D004487 ORTHO05D005483 3.8e-63 245.7 234 57.3
RcHm_v2.0_Chr2g0115971 Rosa chinensis HOM05D004487 ORTHO05D005483 4.9e-63 245.4 233 57.5
FvH4_1g21950 Fragaria vesca HOM05D004487 ORTHO05D005483 2.5e-62 243.0 233 58.4
TWI74G0090 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 9.3e-62 241.1 245 57.1
Lalb_Chr11g0075201 Lupinus albus HOM05D004487 ORTHO05D005483 1.6e-61 240.4 239 56.1
FAN19G1427 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.3e-60 237.3 232 57.3
FAN23G0375 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.3e-60 237.3 232 57.3
Nitab4.5_0000477g0120 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.3e-60 237.3 229 55.9
Cc02_g15410 Coffea canephora HOM05D004487 ORTHO05D005483 1.8e-60 236.9 231 57.1
FvH4_1g25670 Fragaria vesca HOM05D004487 ORTHO05D005483 3.0e-60 236.1 233 57.1
MELO3C012399.2 Cucumis melo HOM05D004487 ORTHO05D005483 1.5e-59 233.8 258 53.9
FAN28G1272 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.9e-59 233.4 205 59.5
FAN28G1914 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.9e-59 233.4 205 59.5
Hma1.2p1_0486F.1_g163280 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 1.9e-59 233.4 245 55.1
Lj3g0008934 Lotus japonicus HOM05D004487 ORTHO05D005483 5.7e-59 231.9 233 54.1
PGR004G1100 Punica granatum HOM05D004487 ORTHO05D005483 9.7e-59 231.1 220 54.1
Ca_23004_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 1.6e-58 230.3 240 54.2
Actinidia08329 Actinidia chinensis HOM05D004487 ORTHO05D005483 2.8e-58 229.6 221 61.1
arahy.Tifrunner.gnm1.ann1.0Q3DRY Arachis hypogaea HOM05D004487 ORTHO05D005483 4.8e-58 228.8 223 53.4
Gohir.1Z049552 Gossypium hirsutum HOM05D004487 ORTHO05D005483 6.3e-58 228.4 183 63.9
FAN19G3081 Fragaria x ananassa HOM05D004487 ORTHO05D005483 8.2e-58 228.0 226 56.2
Lsat_1_v5_gn_2_120680 Lactuca sativa HOM05D004487 ORTHO05D005483 8.2e-58 228.0 277 49.1
Prupe.6G176600 Prunus persica HOM05D004487 ORTHO05D005483 8.2e-58 228.0 243 56.0
FAN26G2580 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.1e-57 227.6 223 56.1
HanXRQChr14g0458831 Helianthus annuus HOM05D004487 ORTHO05D005483 1.1e-57 227.6 236 55.5
DCAR_014253 Daucus carota HOM05D004487 ORTHO05D005483 4.1e-57 225.7 239 54.4
arahy.Tifrunner.gnm1.ann1.NRP8RH Arachis hypogaea HOM05D004487 ORTHO05D005483 1.5e-56 223.8 227 51.5
Lj2A942G27 Lonicera japonica HOM05D004487 ORTHO05D005483 1.3e-55 220.7 201 65.2
SGA_v2.0_scaffold106G30591 Striga asiatica HOM05D004487 ORTHO05D005483 1.3e-55 220.7 222 55.0
arahy.Tifrunner.gnm1.ann1.Z7G166 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.7e-55 220.3 224 52.7
arahy.Tifrunner.gnm1.ann1.10QJ8K Arachis hypogaea HOM05D004487 ORTHO05D005483 6.5e-55 218.4 225 50.7
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 8.5e-55 218.0 203 55.2
ClCG05G021300 Citrullus lanatus HOM05D004487 ORTHO05D005483 8.5e-55 218.0 237 54.0
Ca_25628_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 3.2e-54 216.1 233 50.2
Eucgr.I00528 Eucalyptus grandis HOM05D004487 ORTHO05D005483 4.2e-54 215.7 245 51.4
Glyma.15G199500 Glycine max HOM05D004487 ORTHO05D005483 5.5e-54 215.3 231 53.7
TPR.G33715 Trifolium pratense HOM05D004487 ORTHO05D005483 9.4e-54 214.5 232 52.2
Potri.007G085100 Populus trichocarpa HOM05D004487 ORTHO05D005483 1.6e-53 213.8 238 55.9
Aa31LG6G15640 Aethionema arabicum HOM05D004487 ORTHO05D005483 2.1e-53 213.4 238 50.8
AUR62000713 Chenopodium quinoa HOM05D004487 ORTHO05D005483 2.7e-53 213.0 203 54.7
Glyma.09G092600 Glycine max HOM05D004487 ORTHO05D005483 2.7e-53 213.0 232 53.4
ECA238G1615 Erigeron canadensis HOM05D004487 ORTHO05D005483 3.6e-53 212.6 228 51.8
Phvul.009G211400 Phaseolus vulgaris HOM05D004487 ORTHO05D005483 6.1e-53 211.8 232 53.0
EL10Ac4g09863 Beta vulgaris HOM05D004487 ORTHO05D005483 7.9e-53 211.5 237 48.9
MBI04_g31212_MAGBIO Magnolia biondii HOM05D004487 ORTHO05D005483 6.7e-52 208.4 227 52.9
arahy.Tifrunner.gnm1.ann1.7417N6 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.0e-51 206.8 223 48.9
arahy.Tifrunner.gnm1.ann1.S1NDRU Arachis hypogaea HOM05D004487 ORTHO05D005483 3.3e-51 206.1 223 48.4
Sabra07G0070400 Salix brachista HOM05D004487 ORTHO05D005483 4.3e-51 205.7 238 53.8
unitig_22.g6757 Utricularia gibba HOM05D004487 ORTHO05D005483 4.3e-51 205.7 232 49.6
Nitab4.5_0007222g0010 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.3e-50 204.1 229 50.7
arahy.Tifrunner.gnm1.ann1.32WU9K Arachis hypogaea HOM05D004487 ORTHO05D005483 1.8e-49 200.3 201 51.7
Sc16g0008840 Simmondsia chinensis HOM05D004487 ORTHO05D005483 3.1e-49 199.5 227 51.1
Dinv13358 Davidia involucrata HOM05D004487 ORTHO05D005483 2.6e-48 196.4 175 64.0
Ah.04g161200 Amaranthus hybridus HOM05D004487 ORTHO05D005483 5.9e-48 195.3 240 48.8
TAR626G1474 Trochodendron aralioides HOM05D004487 ORTHO05D005483 1.0e-47 194.5 246 50.8
arahy.Tifrunner.gnm1.ann1.Y72RXW Arachis hypogaea HOM05D004487 ORTHO05D005483 5.0e-47 192.2 224 47.8
Aqoxy2G03854 Aquilegia oxysepala HOM05D004487 ORTHO05D005483 1.1e-46 191.0 208 55.8
Lj2A929T16 Lonicera japonica HOM05D004487 ORTHO05D005483 1.4e-46 190.7 241 52.3
Dinv05687 Davidia involucrata HOM05D004487 ORTHO05D005483 2.5e-46 189.9 173 63.6
VMungo1309G0247 Vigna mungo HOM05D004487 ORTHO05D005483 5.5e-46 188.7 239 48.1
AL7G11780 Arabidopsis lyrata HOM05D004487 ORTHO05D005483 1.6e-45 187.2 234 47.0
Thhalv10027902m.g Eutrema salsugineum HOM05D004487 ORTHO05D005483 2.1e-45 186.8 222 46.8
Potri.005G082500 Populus trichocarpa HOM05D004487 ORTHO05D005483 1.0e-44 184.5 236 47.9
Actinidia33369 Actinidia chinensis HOM05D004487 ORTHO05D005483 3.9e-44 182.6 238 51.3
Psat2g176760 Pisum sativum HOM05D004487 ORTHO05D005483 3.9e-44 182.6 235 46.4
Carub.0007s0150 Capsella rubella HOM05D004487 ORTHO05D005483 6.7e-44 181.8 226 47.3
THA.LOC104807718 Tarenaya hassleriana HOM05D004487 ORTHO05D005483 4.4e-43 179.1 235 46.4
arahy.Tifrunner.gnm1.ann1.9RVJ5A Arachis hypogaea HOM05D004487 ORTHO05D005483 2.8e-42 176.4 213 46.9
Hma1.2p1_0375F.1_g138570 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 3.7e-42 176.0 121 72.7
Sp7g04740 Schrenkiella parvula HOM05D004487 ORTHO05D005483 1.8e-41 173.7 193 50.3
Lj4A903G12 Lonicera japonica HOM05D004487 ORTHO05D005483 9.1e-41 171.4 187 55.1
CARHR215520 Cardamine hirsuta HOM05D004487 ORTHO05D005483 1.7e-39 167.2 235 41.7
arahy.Tifrunner.gnm1.ann1.I45DC0 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.2e-39 166.8 229 46.7
BcaC02g09572 Brassica carinata HOM05D004487 ORTHO05D005483 3.8e-39 166.0 232 43.1
arahy.Tifrunner.gnm1.ann1.L7ETT7 Arachis hypogaea HOM05D004487 ORTHO05D005483 5.0e-39 165.6 173 49.1
C04p44290 Brassica napus HOM05D004487 ORTHO05D005483 2.5e-38 163.3 231 43.7
AT4G39630 Arabidopsis thaliana HOM05D004487 ORTHO05D005483 4.2e-38 162.5 234 41.9
A04p10610 Brassica napus HOM05D004487 ORTHO05D005483 5.5e-38 162.2 228 43.0
BolC4t26003H Brassica oleracea HOM05D004487 ORTHO05D005483 5.5e-38 162.2 242 41.3
Sabra05G0067500 Salix brachista HOM05D004487 ORTHO05D005483 2.7e-37 159.8 230 45.2
HanXRQChr07g0202331 Helianthus annuus HOM05D004487 ORTHO05D005483 8.0e-37 158.3 169 50.9
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 1.0e-36 157.9 228 45.6
BraA04t16724Z Brassica rapa HOM05D004487 ORTHO05D005483 1.1e-35 154.5 228 41.2
Lj6g0018564 Lotus japonicus HOM05D004487 ORTHO05D005483 1.4e-33 147.5 109 67.9
CSS0002847 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 7.0e-33 145.2 99 79.8
Os08g0290400 Oryza sativa ssp. japonica HOM05D004487 ORTHO05D005483 9.1e-33 144.8 228 39.5
BcaB06g27071 Brassica carinata HOM05D004487 ORTHO05D005483 1.6e-32 144.1 199 43.7
ATR0210G008 Amborella trichopoda HOM05D004487 ORTHO05D005483 7.7e-32 141.7 244 39.8
CARHR247100 Cardamine hirsuta HOM05D004487 ORTHO05D005483 1.7e-31 140.6 237 41.4
Sed0026038 Sechium edule HOM05D004487 ORTHO05D005483 2.9e-31 139.8 174 50.0
SHI54251 Sapria himalayana HOM05D004487 ORTHO05D005483 3.8e-31 139.4 220 42.3
arahy.Tifrunner.gnm1.ann1.ZIF87W Arachis hypogaea HOM05D004487 ORTHO05D005483 8.5e-31 138.3 181 43.1
CDE04G3174 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 1.1e-30 137.9 237 39.7
HPP92_005242 Vanilla planifolia HOM05D004487 ORTHO05D005483 3.6e-29 132.9 203 40.4
SEGI_02201 Sequoiadendron giganteum HOM05D004487 ORTHO05D005483 5.2e-28 129.0 204 37.3
arahy.Tifrunner.gnm1.ann1.4M30AQ Arachis hypogaea HOM05D004487 ORTHO05D005483 2.0e-27 127.1 173 45.1
Sp7g36260 Schrenkiella parvula HOM05D004487 ORTHO05D005483 2.2e-26 123.6 226 38.9
Zm00001eb192330 Zea mays HOM05D004487 ORTHO05D005483 1.1e-25 121.3 196 37.2
TWI53G0384 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 9.1e-25 118.2 236 36.0
CDE04G3300 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 2.7e-21 106.7 160 42.5
FAN26G0673 Fragaria x ananassa HOM05D004487 ORTHO05D005483 4.7e-21 105.9 143 45.5
Psat4g139920 Pisum sativum HOM05D004487 ORTHO05D005483 2.8e-18 96.7 151 39.1
arahy.Tifrunner.gnm1.ann1.02EUR6 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.1e-17 94.7 133 40.6
CDE06G2627 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 7.0e-17 92.0 195 35.9
Psat4g139880 Pisum sativum HOM05D004487 ORTHO05D005483 7.0e-17 92.0 144 37.5
Oeu043116.1 Olea europaea HOM05D004487 ORTHO05D005483 5.0e-15 85.9 159 35.8
arahy.Tifrunner.gnm1.ann1.PFH739 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.1e-14 84.7 100 44.0
arahy.Tifrunner.gnm1.ann1.3C43J1 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.8e-12 77.4 108 39.8
Lalb_Chr12g0203581 Lupinus albus HOM05D004487 ORTHO05D005483 1.8e-12 77.4 102 44.1
arahy.Tifrunner.gnm1.ann1.PL6VNF Arachis hypogaea HOM05D004487 ORTHO05D005483 3.0e-12 76.6 92 41.3
arahy.Tifrunner.gnm1.ann1.RJV3W7 Arachis hypogaea HOM05D004487 ORTHO05D005483 3.0e-12 76.6 108 38.9
arahy.Tifrunner.gnm1.ann1.E9WDF1 Arachis hypogaea HOM05D004487 ORTHO05D005483 7.5e-11 72.0 98 44.9
CSS0022213 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.3e-10 71.2 49 75.5
SGA_v2.0_scaffold83G26423 Striga asiatica HOM05D004487 ORTHO05D005483 2.2e-10 70.5 95 44.2
CSS0015836 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 6.3e-10 68.9 44 81.8
ATR0730G218 Amborella trichopoda HOM05D004487 ORTHO05D005483 1.4e-09 67.8 103 41.7
arahy.Tifrunner.gnm1.ann1.94164M Arachis hypogaea HOM05D004487 ORTHO05D005483 2.3e-07 60.5 85 38.8
arahy.Tifrunner.gnm1.ann1.FJ4QJG Arachis hypogaea HOM05D004487 ORTHO05D005483 2.9e-07 60.1 85 38.8
BcaNung00884 Brassica carinata HOM05D004487 ORTHO05D032747 3.9e-07 59.7 56 53.6
Mapoly0076s0033 Marchantia polymorpha HOM05D019097 ORTHO05D019635 4.3e-06 56.2 201 25.4


User provided reference genes

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