Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 5.5e-128 461.1 248 100.0
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 2.6e-109 399.1 249 88.4
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 1.3e-100 370.2 250 78.0
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 9.5e-96 354.0 253 72.7
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.0e-94 350.5 236 78.8
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 2.3e-94 349.4 246 72.0
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 1.2e-93 347.1 249 72.3
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.2e-93 347.1 199 84.4
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 1.5e-93 346.7 242 75.2
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 2.6e-93 345.9 226 75.7
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 2.6e-93 345.9 226 75.7
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 7.5e-93 344.4 235 72.8
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 7.5e-93 344.4 245 70.6
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 7.5e-93 344.4 252 71.0
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 7.5e-93 344.4 235 73.2
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 3.7e-92 342.0 239 74.9
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 4.9e-92 341.7 220 81.8
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 4.9e-92 341.7 199 82.9
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 6.3e-92 341.3 246 71.5
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 8.3e-92 340.9 198 82.8
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 8.3e-92 340.9 199 83.4
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 1.1e-91 340.5 247 71.3
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 1.1e-91 340.5 199 83.4
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 1.8e-91 339.7 239 71.1
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 3.1e-91 339.0 197 82.2
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 5.4e-91 338.2 246 69.1
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 7.0e-91 337.8 199 80.9
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 9.2e-91 337.4 224 75.0
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 1.2e-90 337.0 240 77.5
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 1.2e-90 337.0 199 81.9
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 1.2e-90 337.0 196 83.2
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 1.6e-90 336.7 199 81.9
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 3.5e-90 335.5 197 82.2
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 5.9e-90 334.7 197 81.2
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 7.8e-90 334.3 197 80.7
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 1.3e-89 333.6 197 81.2
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 1.3e-89 333.6 196 82.1
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 2.3e-89 332.8 246 67.9
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.3e-89 332.8 235 71.9
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 2.9e-89 332.4 199 79.4
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 1.1e-88 330.5 197 79.7
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 1.9e-88 329.7 199 79.9
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.9e-88 329.7 199 78.9
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.9e-88 329.7 247 69.2
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 3.3e-88 328.9 198 80.8
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 3.3e-88 328.9 237 68.8
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 1.6e-87 326.6 197 80.7
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 1.6e-87 326.6 197 80.7
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 4.7e-87 325.1 199 78.4
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 6.1e-87 324.7 197 79.7
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 6.1e-87 324.7 194 81.4
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 8.0e-87 324.3 199 79.4
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.0e-86 323.9 193 80.8
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 1.8e-86 323.2 198 80.3
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 3.1e-86 322.4 199 79.4
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 5.2e-86 321.6 198 77.8
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 5.2e-86 321.6 226 72.1
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 6.8e-86 321.2 198 78.3
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 1.2e-85 320.5 197 78.7
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.7e-84 316.6 200 76.5
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 2.2e-84 316.2 200 76.5
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 3.7e-84 315.5 197 77.2
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 4.9e-84 315.1 197 81.2
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 8.3e-84 314.3 197 77.2
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 1.1e-83 313.9 199 76.9
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 4.1e-83 312.0 197 76.6
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 5.4e-83 311.6 196 78.1
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 5.4e-83 311.6 219 71.2
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 7.0e-83 311.2 197 75.6
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 2.0e-82 309.7 197 77.2
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 2.7e-82 309.3 199 74.4
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.0e-81 305.8 197 87.3
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 3.9e-81 305.4 197 75.1
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 3.9e-81 305.4 197 75.1
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 3.9e-81 305.4 197 75.1
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 3.9e-81 305.4 201 74.6
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 5.0e-81 305.1 199 75.9
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 5.0e-81 305.1 199 74.9
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 5.0e-81 305.1 187 78.6
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 8.6e-81 304.3 200 74.5
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 4.3e-80 302.0 197 74.1
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 5.6e-80 301.6 197 74.1
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 7.3e-80 301.2 197 74.1
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 9.5e-80 300.8 198 72.7
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 1.1e-78 297.4 195 74.4
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 3.1e-78 295.8 199 72.9
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 2.2e-76 289.7 164 86.0
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 3.7e-76 288.9 168 83.3
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 9.2e-75 284.3 194 70.6
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 2.1e-74 283.1 197 68.5
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 2.7e-74 282.7 193 70.5
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 9.5e-64 247.7 152 86.2
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 5.2e-62 241.9 191 59.7
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.8e-60 235.7 161 78.3
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 1.1e-56 224.2 129 86.0
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 7.6e-53 211.5 223 52.5
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 1.2e-50 204.1 134 76.1
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 4.6e-50 202.2 223 51.6
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 3.6e-47 192.6 187 49.7
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 4.5e-45 185.7 114 86.8
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 7.6e-45 184.9 148 58.8
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 3.5e-42 176.0 228 46.9
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.0e-41 174.5 131 67.9
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 1.3e-39 167.5 128 69.5
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 2.8e-39 166.4 183 46.4
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 2.0e-37 160.2 93 84.9
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 3.8e-36 156.0 95 76.8
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 6.0e-34 148.7 121 62.8
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 3.3e-32 142.9 94 76.6
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 9.6e-32 141.4 98 71.4
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 5.8e-29 132.1 136 50.7
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 2.2e-28 130.2 129 57.4
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 8.4e-28 128.3 191 38.7
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 3.5e-26 122.9 187 38.0
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 3.4e-21 106.3 71 64.8
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 3.8e-20 102.8 93 59.1
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 7.9e-18 95.1 52 92.3
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 2.3e-17 93.6 52 90.4
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 3.0e-17 93.2 56 82.1
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 1.5e-16 90.9 52 78.8
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 7.7e-13 78.6 49 77.6
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.7e-12 77.4 65 60.0
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 6.1e-10 68.9 69 55.1
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 1.7e-07 60.8 43 76.7
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 3.7e-07 59.7 40 72.5


User provided reference genes

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