Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18527 Vaccinium macrocarpon HOM05D000136 ORTHO05D000080 1.6e-149 532.7 259 100.0
Rhsim08G0019300 Rhododendron simsii HOM05D000136 ORTHO05D000080 3.3e-14 83.2 45 86.7
Actinidia28802 Actinidia chinensis HOM05D000136 ORTHO05D000080 1.4e-12 77.8 249 27.3
Dinv28188 Davidia involucrata HOM05D000136 ORTHO05D000080 2.3e-12 77.0 51 70.6
Nn4g24316 Nelumbo nucifera HOM05D000136 ORTHO05D000080 6.8e-12 75.5 46 73.9
Actinidia35725 Actinidia chinensis HOM05D000136 ORTHO05D000080 3.4e-11 73.2 51 68.6
Hma1.2p1_1583F.1_g292020 Hydrangea macrophylla HOM05D000136 ORTHO05D000080 4.4e-11 72.8 49 69.4
Cc07_g13330 Coffea canephora HOM05D000136 ORTHO05D000080 5.7e-11 72.4 49 65.3
Lj4C261T3 Lonicera japonica HOM05D000136 ORTHO05D000080 1.3e-10 71.2 45 73.3
Migut.K00914 Erythranthe guttata HOM05D000136 ORTHO05D000080 4.9e-10 69.3 51 66.7
RcHm_v2.0_Chr3g0491101 Rosa chinensis HOM05D000136 ORTHO05D000080 3.2e-09 66.6 43 67.4
TWI77G0414 Tripterygium wilfordii HOM05D000136 ORTHO05D000080 3.2e-09 66.6 44 70.5
FAN26G1414 Fragaria x ananassa HOM05D000136 ORTHO05D000080 4.1e-09 66.2 45 64.4
Oeu062716.1 Olea europaea HOM05D000136 ORTHO05D000080 4.1e-09 66.2 45 66.7
Cfa007798 Carpinus fangiana HOM05D000136 ORTHO05D000080 9.2e-09 65.1 43 69.8
Haze_14274 Corylus avellana HOM05D000136 ORTHO05D000080 1.6e-08 64.3 43 69.8
Peaxi162Scf00134g01716 Petunia axillaris HOM05D000136 ORTHO05D000080 1.6e-08 64.3 53 66.0
SalBow5G4394 Salvia bowleyana HOM05D000136 ORTHO05D000080 2.0e-08 63.9 51 58.8
HanXRQChr12g0381711 Helianthus annuus HOM05D000136 ORTHO05D000080 3.5e-08 63.2 51 60.8
FAN26G2903 Fragaria x ananassa HOM05D000136 ORTHO05D000080 5.9e-08 62.4 45 60.0
FAN28G0465 Fragaria x ananassa HOM05D000136 ORTHO05D000080 5.9e-08 62.4 45 60.0
Gohir.D11G141800 Gossypium hirsutum HOM05D000136 ORTHO05D000080 5.9e-08 62.4 49 59.2
Gorai.007G152200 Gossypium raimondii HOM05D000136 ORTHO05D000080 5.9e-08 62.4 49 59.2
MSTRG.15663 Avicennia marina HOM05D000136 ORTHO05D000080 7.8e-08 62.0 51 56.9
CiPaw.04G047800 Carya illinoinensis HOM05D000136 ORTHO05D000080 7.8e-08 62.0 44 63.6
Lsat_1_v5_gn_3_65081 Lactuca sativa HOM05D000136 ORTHO05D000080 7.8e-08 62.0 53 60.4
SGA_v2.0_scaffold45G17163 Striga asiatica HOM05D000136 ORTHO05D000080 7.8e-08 62.0 44 72.7
Cpa.g.sc116.65 Carica papaya HOM05D000136 ORTHO05D000080 1.0e-07 61.6 46 65.2
Nitab4.5_0012752g0010 Nicotiana tabacum HOM05D000136 ORTHO05D000080 1.0e-07 61.6 53 64.2
Nitab4.5_0000574g0090 Nicotiana tabacum HOM05D000136 ORTHO05D000080 1.3e-07 61.2 51 58.8
Gohir.A11G135500 Gossypium hirsutum HOM05D000136 ORTHO05D000080 1.7e-07 60.8 49 57.1
Sopen04g006610 Solanum pennellii HOM05D000136 ORTHO05D000080 1.7e-07 60.8 51 56.9
PGSC0003DMG400023622 Solanum tuberosum HOM05D000136 ORTHO05D000080 1.7e-07 60.8 51 56.9
Thecc.04G054500 Theobroma cacao HOM05D000136 ORTHO05D000080 1.7e-07 60.8 58 53.4
Prupe.3G017400 Prunus persica HOM05D000136 ORTHO05D000080 2.9e-07 60.1 50 56.0
CAN.G525.11 Capsicum annuum HOM05D000136 ORTHO05D000080 3.9e-07 59.7 51 54.9
Glyma.14G214800 Glycine max HOM05D000136 ORTHO05D000080 3.9e-07 59.7 51 56.9
MSTRG.3705 Avicennia marina HOM05D000136 ORTHO05D000080 5.0e-07 59.3 44 70.5
CSS0032287 Camellia sinensis var. sinensis HOM05D000136 ORTHO05D000080 5.0e-07 59.3 52 61.5
FvH4_1g07080 Fragaria vesca HOM05D000136 ORTHO05D000080 5.0e-07 59.3 45 60.0
FAN19G0395 Fragaria x ananassa HOM05D000136 ORTHO05D000080 5.0e-07 59.3 45 60.0
Psat2g046440 Pisum sativum HOM05D000136 ORTHO05D000080 5.0e-07 59.3 43 62.8
AUR62018223 Chenopodium quinoa HOM05D000136 ORTHO05D000080 6.6e-07 58.9 43 60.5
Eucgr.F02898 Eucalyptus grandis HOM05D000136 ORTHO05D000080 6.6e-07 58.9 43 62.8
CiPaw.03G072900 Carya illinoinensis HOM05D000136 ORTHO05D000080 8.6e-07 58.5 52 53.8
Duzib138G1427 Durio zibethinus HOM05D000136 ORTHO05D000080 8.6e-07 58.5 49 57.1
arahy.Tifrunner.gnm1.ann1.80NJ1B Arachis hypogaea HOM05D000136 ORTHO05D000080 1.1e-06 58.2 44 63.6
FAN23G1422 Fragaria x ananassa HOM05D000136 ORTHO05D000080 1.1e-06 58.2 46 63.0
Solyc04g014480.3 Solanum lycopersicum HOM05D000136 ORTHO05D000080 1.1e-06 58.2 52 63.5
arahy.Tifrunner.gnm1.ann1.0J9HE3 Arachis hypogaea HOM05D000136 ORTHO05D000080 1.5e-06 57.8 43 62.8
MD09G1271100 Malus domestica HOM05D000136 ORTHO05D000080 1.9e-06 57.4 50 54.0
Glyma.02G244300 Glycine max HOM05D000136 ORTHO05D000080 2.5e-06 57.0 43 58.1
Potri.017G130700 Populus trichocarpa HOM05D000136 ORTHO05D000080 2.5e-06 57.0 41 65.9
VMungo0647G1596 Vigna mungo HOM05D000136 ORTHO05D000080 2.5e-06 57.0 43 58.1
Ciclev10013053m.g Citrus clementina HOM05D000136 ORTHO05D000080 4.3e-06 56.2 41 65.9
Sabra17G0108800 Salix brachista HOM05D000136 ORTHO05D000080 4.3e-06 56.2 41 65.9
CDE05G1383 Ceratophyllum demersum HOM05D000136 ORTHO05D000080 5.6e-06 55.8 44 61.4
Phvul.008G237000 Phaseolus vulgaris HOM05D000136 ORTHO05D000080 5.6e-06 55.8 51 52.9
Sabra04G0056800 Salix brachista HOM05D000136 ORTHO05D000080 7.3e-06 55.5 41 63.4
Ah.10g032400 Amaranthus hybridus HOM05D000136 ORTHO05D000080 9.5e-06 55.1 44 56.8
QL02p058483 Quercus lobata HOM05D000136 ORTHO05D000080 9.5e-06 55.1 44 61.4
QL10p014223 Quercus lobata HOM05D000136 ORTHO05D000080 9.5e-06 55.1 44 61.4
unitig_748.g8468 Utricularia gibba HOM05D000655 ORTHO05D001166 9.5e-06 55.1 45 53.3


User provided reference genes

Program Settings