Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18445 Vaccinium macrocarpon HOM05D007035 ORTHO05D008774 3.5e-120 434.9 207 100.0
Rhsim08G0078500 Rhododendron simsii HOM05D007035 ORTHO05D008774 7.9e-112 407.1 207 92.8
Actinidia17600 Actinidia chinensis HOM05D007035 ORTHO05D008774 8.4e-106 387.1 203 88.7
CSS0018213 Camellia sinensis var. sinensis HOM05D007035 ORTHO05D008774 1.9e-105 386.0 203 87.2
Cfa015701 Carpinus fangiana HOM05D007035 ORTHO05D008774 8.4e-98 360.5 203 81.8
Hma1.2p1_0315F.1_g122740 Hydrangea macrophylla HOM05D007035 ORTHO05D008774 2.5e-97 359.0 203 80.8
CiPaw.07G005600 Carya illinoinensis HOM05D007035 ORTHO05D008774 3.5e-96 355.1 201 81.6
QL06p052348 Quercus lobata HOM05D007035 ORTHO05D008774 6.0e-96 354.4 203 79.3
Gorai.003G004700 Gossypium raimondii HOM05D007035 ORTHO05D008774 8.7e-95 350.5 204 76.5
Thecc.01G009700 Theobroma cacao HOM05D007035 ORTHO05D008774 2.5e-94 349.0 204 78.4
Gohir.A02G175400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 4.3e-94 348.2 204 76.0
Gohir.D03G004400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 7.4e-94 347.4 204 76.0
Atru.chr3.931 Acer truncatum HOM05D007035 ORTHO05D008774 9.7e-94 347.1 204 79.4
Ciclev10026505m.g Citrus clementina HOM05D007035 ORTHO05D008774 1.8e-92 342.8 203 76.8
Nitab4.5_0001696g0080 Nicotiana tabacum HOM05D007035 ORTHO05D008774 3.1e-92 342.0 203 78.3
Oeu008100.1 Olea europaea HOM05D007035 ORTHO05D008774 3.4e-91 338.6 203 75.9
FvH4_1g10900 Fragaria vesca HOM05D007035 ORTHO05D008774 7.6e-91 337.4 203 75.9
FAN19G1923 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.0e-90 337.0 203 75.9
Prupe.7G176600 Prunus persica HOM05D007035 ORTHO05D008774 2.2e-90 335.9 203 76.4
FAN28G2890 Fragaria x ananassa HOM05D007035 ORTHO05D008774 2.9e-90 335.5 203 75.4
MD02G1242600 Malus domestica HOM05D007035 ORTHO05D008774 2.9e-90 335.5 203 75.9
FAN26G0170 Fragaria x ananassa HOM05D007035 ORTHO05D008774 5.0e-90 334.7 202 75.7
PGSC0003DMG400001578 Solanum tuberosum HOM05D007035 ORTHO05D008774 8.5e-90 334.0 203 78.3
TWI59G1021 Tripterygium wilfordii HOM05D007035 ORTHO05D008774 1.4e-89 333.2 203 73.9
Manes.02G111400 Manihot esculenta HOM05D007035 ORTHO05D008774 2.5e-89 332.4 203 72.9
PGR102G2581 Punica granatum HOM05D007035 ORTHO05D008774 3.2e-89 332.0 203 71.4
CAN.G890.13 Capsicum annuum HOM05D007035 ORTHO05D008774 5.5e-89 331.3 203 76.4
Solyc02g083180.4 Solanum lycopersicum HOM05D007035 ORTHO05D008774 7.2e-89 330.9 203 77.3
Sopen02g027940 Solanum pennellii HOM05D007035 ORTHO05D008774 7.2e-89 330.9 203 77.3
TAR628G1604 Trochodendron aralioides HOM05D007035 ORTHO05D008774 9.3e-89 330.5 203 72.9
Lsat_1_v5_gn_2_75101 Lactuca sativa HOM05D007035 ORTHO05D008774 1.2e-88 330.1 205 73.2
FAN23G2784 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.6e-88 329.7 203 74.4
Phvul.003G267600 Phaseolus vulgaris HOM05D007035 ORTHO05D008774 3.6e-88 328.6 203 71.9
Eucgr.J02513 Eucalyptus grandis HOM05D007035 ORTHO05D008774 3.0e-87 325.5 206 73.3
Potri.005G105500 Populus trichocarpa HOM05D007035 ORTHO05D008774 3.9e-87 325.1 203 73.4
Psat4g103040 Pisum sativum HOM05D007035 ORTHO05D008774 6.7e-87 324.3 203 71.4
MELO3C007951.2 Cucumis melo HOM05D007035 ORTHO05D008774 1.5e-86 323.2 204 70.1
HanXRQChr07g0192541 Helianthus annuus HOM05D007035 ORTHO05D008774 1.9e-86 322.8 203 72.4
ClCG01G020680 Citrullus lanatus HOM05D007035 ORTHO05D008774 4.3e-86 321.6 203 70.4
Medtr8g074720 Medicago truncatula HOM05D007035 ORTHO05D008774 4.3e-86 321.6 203 70.4
Cc07_g12370 Coffea canephora HOM05D007035 ORTHO05D008774 7.4e-86 320.9 203 71.4
Lj4g0012539 Lotus japonicus HOM05D007035 ORTHO05D008774 7.4e-86 320.9 203 70.0
CsaV3_6G047600 Cucumis sativus L. HOM05D007035 ORTHO05D008774 2.8e-85 318.9 205 69.3
Lj4A228G16 Lonicera japonica HOM05D007035 ORTHO05D008774 2.8e-85 318.9 183 80.9
Nn6g31845 Nelumbo nucifera HOM05D007035 ORTHO05D008774 1.4e-84 316.6 205 69.8
Sed0013381 Sechium edule HOM05D007035 ORTHO05D008774 1.4e-84 316.6 203 69.0
Ah.10g032510 Amaranthus hybridus HOM05D007035 ORTHO05D008774 3.1e-84 315.5 203 69.5
Ca_03644_v3 Cicer arietinum L. HOM05D007035 ORTHO05D008774 3.1e-84 315.5 203 69.0
Lalb_Chr05g0229721 Lupinus albus HOM05D007035 ORTHO05D008774 3.1e-84 315.5 203 70.0
THA.LOC104807437 Tarenaya hassleriana HOM05D007035 ORTHO05D008774 4.1e-84 315.1 203 68.5
GSVIVG01006258001 Vitis vinifera HOM05D007035 ORTHO05D008774 5.3e-84 314.7 203 69.5
TPR.G32013 Trifolium pratense HOM05D007035 ORTHO05D008774 6.9e-84 314.3 196 70.9
EL10Ac9g22991 Beta vulgaris HOM05D007035 ORTHO05D008774 5.9e-83 311.2 203 70.0
DCAR_027629 Daucus carota HOM05D007035 ORTHO05D008774 1.3e-82 310.1 201 70.1
A06p33710 Brassica napus HOM05D007035 ORTHO05D008774 1.4e-81 306.6 203 65.5
BraA06t26305Z Brassica rapa HOM05D007035 ORTHO05D008774 1.4e-81 306.6 206 65.5
C03p58600 Brassica napus HOM05D007035 ORTHO05D008774 7.2e-81 304.3 206 64.6
Migut.L00741 Erythranthe guttata HOM05D007035 ORTHO05D008774 9.4e-81 303.9 203 69.0
BcaB08g34751 Brassica carinata HOM05D007035 ORTHO05D008774 1.2e-80 303.5 206 64.6
AT2G17695 Arabidopsis thaliana HOM05D007035 ORTHO05D008774 3.6e-80 302.0 203 64.5
Sp3g31080 Schrenkiella parvula HOM05D007035 ORTHO05D008774 3.6e-80 302.0 207 64.3
BcaC01g02899 Brassica carinata HOM05D007035 ORTHO05D008774 4.7e-80 301.6 206 64.6
BolC3t18121H Brassica oleracea HOM05D007035 ORTHO05D008774 4.7e-80 301.6 206 64.6
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 6.1e-80 301.2 205 66.8
CANSAT25G1910 Cannabis sativa HOM05D007035 ORTHO05D008774 1.0e-79 300.4 205 68.8
Carub.0003s3179 Capsella rubella HOM05D007035 ORTHO05D008774 1.0e-79 300.4 203 64.5
AL3G50680 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 1.4e-79 300.1 202 64.9
COL.COLO4_22513 Corchorus olitorius HOM05D007035 ORTHO05D008774 6.7e-79 297.7 202 67.8
Thhalv10022849m.g Eutrema salsugineum HOM05D007035 ORTHO05D008774 8.8e-79 297.4 207 63.3
SalBow5G2770 Salvia bowleyana HOM05D007035 ORTHO05D008774 8.8e-79 297.4 205 66.8
Hund08627 Selenicereus undatus HOM05D007035 ORTHO05D008774 3.3e-78 295.4 178 73.6
arahy.Tifrunner.gnm1.ann1.JN68AD Arachis hypogaea HOM05D007035 ORTHO05D008774 4.4e-78 295.0 204 66.7
arahy.Tifrunner.gnm1.ann1.Y2NACG Arachis hypogaea HOM05D007035 ORTHO05D008774 4.4e-78 295.0 204 66.7
CDE09G0622 Ceratophyllum demersum HOM05D007035 ORTHO05D008774 4.4e-78 295.0 203 69.0
PSO675G7652 Papaver somniferum HOM05D007035 ORTHO05D008774 8.2e-77 290.8 206 68.4
PSO541G4772 Papaver somniferum HOM05D007035 ORTHO05D008774 1.8e-76 289.7 206 68.4
Peaxi162Scf00300g00123 Petunia axillaris HOM05D007035 ORTHO05D008774 4.1e-76 288.5 176 75.6
VMungo0251G2208 Vigna mungo HOM05D007035 ORTHO05D008774 5.3e-76 288.1 182 71.4
QL06p052340 Quercus lobata HOM05D007035 ORTHO05D008774 9.1e-76 287.3 164 79.3
MBI05_g35104_MAGBIO Magnolia biondii HOM05D007035 ORTHO05D008774 2.0e-75 286.2 210 63.8
unitig_88.g27771 Utricularia gibba HOM05D007035 ORTHO05D008774 2.3e-71 272.7 207 61.4
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 4.4e-70 268.5 181 65.2
ECA238G0027 Erigeron canadensis HOM05D007035 ORTHO05D008774 2.8e-69 265.8 185 65.9
RcHm_v2.0_Chr2g0098161 Rosa chinensis HOM05D007035 ORTHO05D008774 2.6e-67 259.2 165 71.5
AUR62032933 Chenopodium quinoa HOM05D007035 ORTHO05D008774 3.5e-67 258.8 162 72.2
Dinv40155 Davidia involucrata HOM05D002155 ORTHO05D002215 3.5e-67 258.8 145 81.4
Glyma.16G120900 Glycine max HOM05D007035 ORTHO05D008774 7.7e-67 257.7 161 72.7
HPP92_014997 Vanilla planifolia HOM05D007035 ORTHO05D008774 1.6e-64 250.0 203 56.7
MSTRG.15590 Avicennia marina HOM05D007035 ORTHO05D008774 1.5e-62 243.4 161 70.2
Os03g0107600 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 2.0e-59 233.0 217 49.8
Os04g0119300 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 2.0e-59 233.0 217 49.8
Cpa.g.sc6.337 Carica papaya HOM05D007035 ORTHO05D008774 7.7e-59 231.1 145 71.7
Sc20g0005390 Simmondsia chinensis HOM05D007035 ORTHO05D008774 1.5e-57 226.9 147 68.7
Zm00001eb241510 Zea mays HOM05D007035 ORTHO05D008774 1.5e-57 226.9 215 49.3
ATR0661G057 Amborella trichopoda HOM05D007035 ORTHO05D008774 7.2e-57 224.6 186 55.4
Pp3c1_37080 Physcomitrium patens HOM05D007035 ORTHO05D008774 8.0e-56 221.1 212 49.5
Aqoxy6G01870 Aquilegia oxysepala HOM05D007035 ORTHO05D008774 3.7e-53 212.2 148 65.5
AL3G27500 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 3.5e-51 205.7 146 59.6
AUR62017739 Chenopodium quinoa HOM05D007035 ORTHO05D008774 3.5e-51 205.7 121 76.0
Duzib147G1308 Durio zibethinus HOM05D007035 ORTHO05D008774 1.3e-50 203.8 168 57.7
CARHR107960 Cardamine hirsuta HOM05D007035 ORTHO05D008774 1.0e-47 194.1 121 67.8
Mapoly0027s0184 Marchantia polymorpha HOM05D007035 ORTHO05D008774 5.2e-47 191.8 214 44.4
Prupe.1G268600 Prunus persica HOM05D007035 ORTHO05D008774 5.6e-41 171.8 106 70.8
Prupe.6G001100 Prunus persica HOM05D007035 ORTHO05D008774 2.1e-40 169.9 106 69.8
SMO364G0252 Selaginella moellendorffii HOM05D007035 ORTHO05D008774 8.3e-37 157.9 154 49.4
Eucgr.J01132 Eucalyptus grandis HOM05D007035 ORTHO05D008774 1.7e-34 150.2 145 52.4
AagrBONN_evm.TU.Sc2ySwM_117.3401 Anthoceros agrestis HOM05D007035 ORTHO05D008774 1.9e-33 146.7 156 45.5
SEGI_40855 Sequoiadendron giganteum HOM05D007035 ORTHO05D008774 8.0e-32 141.4 168 41.1
Cre17.g720550 Chlamydomonas reinhardtii HOM05D007035 ORTHO05D008774 1.7e-26 123.6 209 32.1
CBR_g48433 Chara braunii HOM05D007035 ORTHO05D008774 3.9e-26 122.5 268 27.2
PRCOL_00002518 Prasinoderma coloniale HOM05D007035 ORTHO05D008774 1.1e-25 120.9 182 34.6
MCO10G322 Micromonas commoda HOM05D007035 ORTHO05D008774 1.1e-23 114.4 199 33.7
RcHm_v2.0_Chr5g0036401 Rosa chinensis HOM05D007035 ORTHO05D008774 1.4e-23 114.0 104 53.8
Cpa.g.sc6.336 Carica papaya HOM05D007035 ORTHO05D008774 2.1e-19 100.1 55 80.0
Peaxi162Scf00300g00119 Petunia axillaris HOM05D007035 ORTHO05D008774 1.1e-17 94.4 60 70.0
RcHm_v2.0_Chr5g0036471 Rosa chinensis HOM05D007035 ORTHO05D008774 9.9e-14 81.3 54 61.1


User provided reference genes

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