Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18402 Vaccinium macrocarpon HOM05D004665 ORTHO05D006264 1.7e-87 325.9 156 100.0
Rhsim08G0037600 Rhododendron simsii HOM05D004665 ORTHO05D006264 1.9e-54 216.1 110 95.5
CSS0012528 Camellia sinensis var. sinensis HOM05D004665 ORTHO05D006264 3.3e-54 215.3 133 80.5
CSS0013787 Camellia sinensis var. sinensis HOM05D004665 ORTHO05D006264 3.3e-54 215.3 133 80.5
Actinidia19542 Actinidia chinensis HOM05D004665 ORTHO05D006264 9.6e-54 213.8 110 90.9
Dinv33260 Davidia involucrata HOM05D004665 ORTHO05D006264 1.1e-52 210.3 133 77.4
Migut.F00002 Erythranthe guttata HOM05D004665 ORTHO05D006264 4.0e-52 208.4 133 77.4
Hma1.2p1_0421F.1_g149890 Hydrangea macrophylla HOM05D004665 ORTHO05D006264 9.0e-52 207.2 133 76.7
Oeu050153.1 Olea europaea HOM05D004665 ORTHO05D006264 2.2e-50 202.6 133 75.2
RcHm_v2.0_Chr2g0176711 Rosa chinensis HOM05D004665 ORTHO05D006264 2.9e-50 202.2 136 73.5
Cfa007139 Carpinus fangiana HOM05D004665 ORTHO05D006264 3.8e-50 201.8 133 74.4
MSTRG.3035 Avicennia marina HOM05D004665 ORTHO05D006264 4.9e-50 201.4 133 76.7
FAN05G2324 Fragaria x ananassa HOM05D004665 ORTHO05D006264 1.4e-49 199.9 136 72.1
MD17G1004100 Malus domestica HOM05D004665 ORTHO05D006264 1.9e-49 199.5 133 72.9
Nitab4.5_0000519g0340 Nicotiana tabacum HOM05D004665 ORTHO05D006264 1.9e-49 199.5 133 73.7
Lj7A619T48 Lonicera japonica HOM05D004665 ORTHO05D006264 2.4e-49 199.1 133 72.9
FvH4_6g54450 Fragaria vesca HOM05D004665 ORTHO05D006264 3.2e-49 198.7 136 71.3
FAN02G3871 Fragaria x ananassa HOM05D004665 ORTHO05D006264 3.2e-49 198.7 136 71.3
arahy.Tifrunner.gnm1.ann1.3E1BT5 Arachis hypogaea HOM05D004665 ORTHO05D006264 4.2e-49 198.4 133 72.2
CAN.G473.165 Capsicum annuum HOM05D004665 ORTHO05D006264 5.5e-49 198.0 133 73.7
COL.COLO4_13402 Corchorus olitorius HOM05D004665 ORTHO05D006264 9.3e-49 197.2 133 73.7
CiPaw.04G000200 Carya illinoinensis HOM05D004665 ORTHO05D006264 1.2e-48 196.8 133 73.7
Prupe.3G315100 Prunus persica HOM05D004665 ORTHO05D006264 1.2e-48 196.8 133 70.7
TWI60G0175 Tripterygium wilfordii HOM05D004665 ORTHO05D006264 1.2e-48 196.8 133 72.9
Aqoxy5G03000 Aquilegia oxysepala HOM05D004665 ORTHO05D006264 1.6e-48 196.4 133 74.4
Gohir.A11G061900 Gossypium hirsutum HOM05D004665 ORTHO05D006264 1.6e-48 196.4 133 71.4
Gohir.D11G065800 Gossypium hirsutum HOM05D004665 ORTHO05D006264 1.6e-48 196.4 133 71.4
Gohir.D11G065866 Gossypium hirsutum HOM05D004665 ORTHO05D006264 1.6e-48 196.4 133 71.4
Gorai.007G071300 Gossypium raimondii HOM05D004665 ORTHO05D006264 1.6e-48 196.4 133 71.4
MBI11_g30566_MAGBIO Magnolia biondii HOM05D004665 ORTHO05D006264 1.6e-48 196.4 133 72.9
TAR622G0174 Trochodendron aralioides HOM05D004665 ORTHO05D006264 1.6e-48 196.4 133 72.9
FAN09G0696 Fragaria x ananassa HOM05D004665 ORTHO05D006264 2.1e-48 196.1 136 71.3
FAN14G5400 Fragaria x ananassa HOM05D004665 ORTHO05D006264 2.1e-48 196.1 136 71.3
Nn3g16211 Nelumbo nucifera HOM05D004665 ORTHO05D006264 3.5e-48 195.3 110 82.7
SalBow4G0739 Salvia bowleyana HOM05D004665 ORTHO05D006264 3.5e-48 195.3 133 72.2
Lj2g0020206 Lotus japonicus HOM05D004665 ORTHO05D006264 4.6e-48 194.9 136 74.3
Ca_04509_v3 Cicer arietinum L. HOM05D004665 ORTHO05D006264 1.0e-47 193.7 151 65.6
Potri.014G139700 Populus trichocarpa HOM05D004665 ORTHO05D006264 1.8e-47 193.0 133 72.2
QL02p068558 Quercus lobata HOM05D004665 ORTHO05D006264 1.8e-47 193.0 136 72.1
Sabra14G0105400 Salix brachista HOM05D004665 ORTHO05D006264 1.8e-47 193.0 133 72.9
ECA238G3366 Erigeron canadensis HOM05D004665 ORTHO05D006264 2.3e-47 192.6 152 65.8
Glyma.02G068000 Glycine max HOM05D004665 ORTHO05D006264 2.3e-47 192.6 133 73.7
Glyma.16G149500 Glycine max HOM05D004665 ORTHO05D006264 2.3e-47 192.6 133 73.7
Medtr6g033100 Medicago truncatula HOM05D004665 ORTHO05D006264 2.3e-47 192.6 133 72.2
Eucgr.I01571 Eucalyptus grandis HOM05D004665 ORTHO05D006264 3.0e-47 192.2 133 72.9
DCAR_014318 Daucus carota HOM05D004665 ORTHO05D006264 3.9e-47 191.8 121 74.4
VMungo0464G1810 Vigna mungo HOM05D004665 ORTHO05D006264 3.9e-47 191.8 133 72.9
Manes.04G097200 Manihot esculenta HOM05D004665 ORTHO05D006264 6.7e-47 191.0 133 72.9
Sc16g0004200 Simmondsia chinensis HOM05D004665 ORTHO05D006264 6.7e-47 191.0 133 72.2
ClCG05G012480 Citrullus lanatus HOM05D004665 ORTHO05D006264 1.1e-46 190.3 133 71.4
Psat1g014640 Pisum sativum HOM05D004665 ORTHO05D006264 1.9e-46 189.5 133 71.4
Duzib147G0914 Durio zibethinus HOM05D004665 ORTHO05D006264 3.3e-46 188.7 133 70.7
Peaxi162Scf00420g00931 Petunia axillaris HOM05D004665 ORTHO05D006264 3.3e-46 188.7 133 72.9
PGR142G3265 Punica granatum HOM05D004665 ORTHO05D006264 3.3e-46 188.7 133 70.7
HanXRQChr14g0451551 Helianthus annuus HOM05D004665 ORTHO05D006264 4.3e-46 188.3 133 72.2
Sed0011932 Sechium edule HOM05D004665 ORTHO05D006264 5.6e-46 188.0 133 70.7
Cc07_g01420 Coffea canephora HOM05D004665 ORTHO05D006264 7.4e-46 187.6 136 72.8
TPR.G6109 Trifolium pratense HOM05D004665 ORTHO05D006264 7.4e-46 187.6 151 64.2
HanXRQChr07g0197991 Helianthus annuus HOM05D004665 ORTHO05D006264 9.6e-46 187.2 133 70.7
CsaV3_3G020050 Cucumis sativus L. HOM05D004665 ORTHO05D006264 1.3e-45 186.8 133 69.9
MD09G1001000 Malus domestica HOM05D004665 ORTHO05D006264 1.3e-45 186.8 133 70.7
Phvul.004G068100 Phaseolus vulgaris HOM05D004665 ORTHO05D006264 1.3e-45 186.8 133 71.4
Haze_14984 Corylus avellana HOM05D004665 ORTHO05D006264 2.1e-45 186.0 163 60.7
Thecc.04G051300 Theobroma cacao HOM05D004665 ORTHO05D006264 2.1e-45 186.0 133 71.4
CANSAT64G2474 Cannabis sativa HOM05D004665 ORTHO05D006264 2.8e-45 185.7 133 69.9
Ciclev10015243m.g Citrus clementina HOM05D004665 ORTHO05D006264 2.8e-45 185.7 110 80.0
GSVIVG01032952001 Vitis vinifera HOM05D004665 ORTHO05D006264 2.8e-45 185.7 151 61.6
Lalb_Chr02g0156931 Lupinus albus HOM05D004665 ORTHO05D006264 4.8e-45 184.9 151 64.2
Ah.02g128750 Amaranthus hybridus HOM05D000154 ORTHO05D000092 8.2e-45 184.1 136 71.3
PSO478G3167 Papaver somniferum HOM05D004665 ORTHO05D006264 1.8e-44 183.0 133 70.7
A06p41830 Brassica napus HOM05D004665 ORTHO05D006264 4.0e-44 181.8 155 61.3
BraA06t27102Z Brassica rapa HOM05D004665 ORTHO05D006264 4.0e-44 181.8 155 61.3
THA.LOC104824001 Tarenaya hassleriana HOM05D004665 ORTHO05D006264 2.0e-43 179.5 136 67.6
BcaC06g31051 Brassica carinata HOM05D004665 ORTHO05D006264 3.4e-43 178.7 133 68.4
C07p35690 Brassica napus HOM05D004665 ORTHO05D006264 3.4e-43 178.7 136 67.6
BolC7t44090H Brassica oleracea HOM05D004665 ORTHO05D006264 3.4e-43 178.7 136 67.6
Thhalv10004224m.g Eutrema salsugineum HOM05D004665 ORTHO05D006264 3.4e-43 178.7 136 67.6
PSO017G6847 Papaver somniferum HOM05D004665 ORTHO05D006264 3.4e-43 178.7 133 69.2
Lalb_Chr21g0316981 Lupinus albus HOM05D004665 ORTHO05D006264 4.5e-43 178.3 136 67.6
A02p34660 Brassica napus HOM05D004665 ORTHO05D006264 5.8e-43 177.9 136 67.6
THA.LOC104805296 Tarenaya hassleriana HOM05D004665 ORTHO05D006264 5.8e-43 177.9 136 66.9
AL5G15510 Arabidopsis lyrata HOM05D004665 ORTHO05D006264 1.0e-42 177.2 136 66.9
BraA02t08474Z Brassica rapa HOM05D004665 ORTHO05D006264 1.0e-42 177.2 136 66.9
Sp2g15790 Schrenkiella parvula HOM05D004665 ORTHO05D006264 1.0e-42 177.2 136 66.9
CARHR147680 Cardamine hirsuta HOM05D004665 ORTHO05D006264 1.7e-42 176.4 136 66.9
AUR62032536 Chenopodium quinoa HOM05D004665 ORTHO05D006264 1.7e-42 176.4 133 66.9
Carub.0005s0467 Capsella rubella HOM05D004665 ORTHO05D006264 2.2e-42 176.0 136 66.9
Peaxi162Scf00058g00033 Petunia axillaris HOM05D004665 ORTHO05D006264 3.8e-42 175.3 133 67.7
C02p53220 Brassica napus HOM05D004665 ORTHO05D006264 4.9e-42 174.9 136 66.2
Nitab4.5_0002901g0090 Nicotiana tabacum HOM05D004665 ORTHO05D006264 4.9e-42 174.9 186 52.7
Aa31LG2G5890 Aethionema arabicum HOM05D004665 ORTHO05D006264 1.1e-41 173.7 136 66.2
AT3G26670 Arabidopsis thaliana HOM05D004665 ORTHO05D006264 1.1e-41 173.7 136 66.2
BcaB07g30223 Brassica carinata HOM05D004665 ORTHO05D006264 2.5e-41 172.6 137 66.4
Os02g0518100 Oryza sativa ssp. japonica HOM05D004665 ORTHO05D006264 4.2e-41 171.8 110 72.7
HPP92_009749 Vanilla planifolia HOM05D004665 ORTHO05D006264 4.2e-41 171.8 110 73.6
Zm00001eb242230 Zea mays HOM05D004665 ORTHO05D006264 4.2e-41 171.8 110 73.6
BcaC03g17377 Brassica carinata HOM05D004665 ORTHO05D006264 9.3e-41 170.6 136 64.7
BolC2t11394H Brassica oleracea HOM05D004665 ORTHO05D006264 9.3e-41 170.6 136 64.7
HPP92_021581 Vanilla planifolia HOM05D004665 ORTHO05D006264 2.1e-40 169.5 125 67.2
Nitab4.5_0003951g0020 Nicotiana tabacum HOM05D004665 ORTHO05D006264 1.0e-39 167.2 133 65.4
CAN.G1393.18 Capsicum annuum HOM05D004665 ORTHO05D006264 1.3e-39 166.8 133 63.9
Sopen01g033730 Solanum pennellii HOM05D004665 ORTHO05D006264 2.5e-38 162.5 133 65.4
CDE06G1855 Ceratophyllum demersum HOM05D004665 ORTHO05D006264 3.3e-38 162.2 139 64.7
PGSC0003DMG400025244 Solanum tuberosum HOM05D004665 ORTHO05D006264 3.3e-38 162.2 110 73.6
EL10Ac6g13903 Beta vulgaris HOM05D004665 ORTHO05D006264 5.7e-38 161.4 184 52.2
Haze_14979 Corylus avellana HOM05D004665 ORTHO05D006264 2.8e-37 159.1 163 55.8
Solyc01g086730.4 Solanum lycopersicum HOM05D004665 ORTHO05D006264 2.8e-37 159.1 110 73.6
CDE02G1303 Ceratophyllum demersum HOM05D004665 ORTHO05D006264 2.6e-35 152.5 101 76.2
Pp3c8_3640 Physcomitrium patens HOM05D004665 ORTHO05D006264 3.8e-34 148.7 138 57.2
arahy.Tifrunner.gnm1.ann1.1F18R3 Arachis hypogaea HOM05D004665 ORTHO05D006264 5.0e-34 148.3 133 58.6
Mapoly0166s0011 Marchantia polymorpha HOM05D004665 ORTHO05D006264 1.4e-33 146.7 172 46.5
Pp3c3_36320 Physcomitrium patens HOM05D004665 ORTHO05D006264 3.6e-32 142.1 136 53.7
SGA_v2.0_scaffold44G16957 Striga asiatica HOM05D004665 ORTHO05D006264 2.0e-30 136.3 103 68.0
AagrBONN_evm.TU.Sc2ySwM_117.2741 Anthoceros agrestis HOM05D004665 ORTHO05D006264 2.5e-30 136.0 112 60.7
AL8G18270 Arabidopsis lyrata HOM05D004665 ORTHO05D021400 3.7e-29 132.1 81 75.3
Hund04137 Selenicereus undatus HOM05D004665 ORTHO05D006264 3.7e-29 132.1 116 58.6
Nn4g22078 Nelumbo nucifera HOM05D004665 ORTHO05D006264 1.4e-28 130.2 85 74.1
Manes.11G073500 Manihot esculenta HOM05D004665 ORTHO05D006264 1.8e-28 129.8 103 66.0
Duzib264G1200 Durio zibethinus HOM05D004665 ORTHO05D006264 7.7e-27 124.4 96 65.6
Lsat_1_v5_gn_2_95241 Lactuca sativa HOM05D005263 ORTHO05D006891 7.7e-27 124.4 106 62.3
HPP92_009766 Vanilla planifolia HOM05D004665 ORTHO05D006264 6.5e-26 121.3 107 57.9
MELO3C014760.2 Cucumis melo HOM05D004665 ORTHO05D006264 2.5e-25 119.4 97 63.9
Aqoxy271s006 Aquilegia oxysepala HOM05D004665 ORTHO05D006264 3.6e-24 115.5 85 70.6
Lsat_1_v5_gn_8_141180 Lactuca sativa HOM05D004665 ORTHO05D006264 7.9e-24 114.4 77 74.0
BcaB07g30221 Brassica carinata HOM05D004665 ORTHO05D006264 3.0e-23 112.5 97 62.9
Cre12.g523100 Chlamydomonas reinhardtii HOM05D004665 ORTHO05D006264 1.1e-22 110.5 105 54.3
SEGI_40793 Sequoiadendron giganteum HOM05D004665 ORTHO05D006264 7.4e-22 107.8 78 66.7
CARHR285500 Cardamine hirsuta HOM05D004665 ORTHO05D021400 9.7e-22 107.5 66 77.3
Hma1.2p1_0040F.1_g025010 Hydrangea macrophylla HOM05D004665 ORTHO05D021400 1.4e-20 103.6 60 80.0
Cre08.g358400 Chlamydomonas reinhardtii HOM05D004665 ORTHO05D006264 5.3e-20 101.7 119 47.1
Cpa.g.sc70.39 Carica papaya HOM05D004665 ORTHO05D006264 1.2e-16 90.5 133 44.4
Cfa007634 Carpinus fangiana HOM05D004665 ORTHO05D006264 6.1e-16 88.2 74 63.5
AUR62017468 Chenopodium quinoa HOM05D004665 ORTHO05D006264 1.8e-15 86.7 90 55.6
Atru.chr6.2724 Acer truncatum HOM05D004665 ORTHO05D006264 1.1e-14 84.0 49 87.8
Zm00001eb180680 Zea mays HOM05D004665 ORTHO05D006264 2.0e-14 83.2 110 45.5
Hma1.2p1_1395F.1_g280510 Hydrangea macrophylla HOM05D001315 ORTHO05D001618 4.1e-12 75.5 45 73.3
BolC3t19617H Brassica oleracea HOM05D004665 ORTHO05D021400 3.2e-09 65.9 58 55.2
C09p15630 Brassica napus HOM05D004665 ORTHO05D021400 3.0e-07 59.3 62 48.4
C03p73200 Brassica napus HOM05D004665 ORTHO05D021400 6.7e-07 58.2 63 49.2


User provided reference genes

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