Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 1.3e-51 206.8 170 100.0
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 2.0e-41 172.9 166 77.1
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 6.0e-41 171.4 185 71.4
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.6e-17 93.6 260 48.1
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.6e-17 93.6 56 82.1
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 1.5e-15 87.0 56 73.2
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 8.1e-14 81.3 52 76.9
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 1.1e-13 80.9 55 67.3
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 2.4e-13 79.7 55 61.8
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 2.4e-13 79.7 55 61.8
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 3.1e-13 79.3 55 65.5
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 3.1e-13 79.3 51 70.6
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 4.0e-13 79.0 51 70.6
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 4.0e-13 79.0 56 60.7
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 4.0e-13 79.0 55 65.5
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 5.3e-13 78.6 55 65.5
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 9.0e-13 77.8 55 63.6
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 1.2e-12 77.4 55 63.6
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 1.2e-12 77.4 55 61.8
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 1.5e-12 77.0 55 61.8
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 1.5e-12 77.0 55 61.8
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 1.5e-12 77.0 55 58.2
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.5e-12 77.0 56 58.9
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 2.0e-12 76.6 55 60.0
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 2.0e-12 76.6 55 60.0
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 2.6e-12 76.3 55 58.2
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 2.6e-12 76.3 55 61.8
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 3.4e-12 75.9 55 61.8
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 3.4e-12 75.9 55 58.2
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 3.4e-12 75.9 55 58.2
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 3.4e-12 75.9 51 68.6
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 4.5e-12 75.5 55 60.0
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 4.5e-12 75.5 55 60.0
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 4.5e-12 75.5 55 58.2
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 4.5e-12 75.5 54 59.3
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 4.5e-12 75.5 55 58.2
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 7.6e-12 74.7 51 66.7
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 7.6e-12 74.7 55 61.8
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 9.9e-12 74.3 56 55.4
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 9.9e-12 74.3 55 58.2
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 9.9e-12 74.3 55 60.0
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 9.9e-12 74.3 55 56.4
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 9.9e-12 74.3 55 56.4
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 9.9e-12 74.3 55 56.4
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 1.3e-11 73.9 55 61.8
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.3e-11 73.9 55 58.2
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 1.3e-11 73.9 70 50.0
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 1.3e-11 73.9 51 64.7
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 2.2e-11 73.2 55 58.2
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 2.2e-11 73.2 55 54.5
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 2.2e-11 73.2 56 57.1
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.9e-11 72.8 55 56.4
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 3.8e-11 72.4 55 56.4
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 3.8e-11 72.4 55 60.0
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 3.8e-11 72.4 54 61.1
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 4.9e-11 72.0 71 46.5
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 8.4e-11 71.2 55 56.4
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 1.1e-10 70.9 51 62.7
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 1.4e-10 70.5 56 55.4
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 1.9e-10 70.1 71 45.1
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 1.9e-10 70.1 55 58.2
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 1.9e-10 70.1 55 58.2
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 1.9e-10 70.1 71 45.1
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 1.9e-10 70.1 55 52.7
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 2.4e-10 69.7 55 54.5
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 2.4e-10 69.7 55 56.4
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 4.2e-10 68.9 57 54.4
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 5.4e-10 68.6 55 50.9
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 5.4e-10 68.6 56 50.0
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 5.4e-10 68.6 55 50.9
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 7.1e-10 68.2 56 50.0
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 7.1e-10 68.2 56 50.0
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 7.1e-10 68.2 56 50.0
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 7.1e-10 68.2 56 50.0
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 9.3e-10 67.8 56 50.0
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 9.3e-10 67.8 55 52.7
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 1.2e-09 67.4 56 48.2
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 1.2e-09 67.4 56 50.0
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 1.2e-09 67.4 55 50.9
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.6e-09 67.0 55 50.9
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 1.6e-09 67.0 56 50.0
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.6e-09 67.0 50 58.0
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 2.1e-09 66.6 52 57.7
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 2.7e-09 66.2 55 52.7
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 2.7e-09 66.2 55 50.9
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 3.5e-09 65.9 55 49.1
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 4.6e-09 65.5 50 54.0
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 6.0e-09 65.1 55 49.1
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 6.0e-09 65.1 50 56.0
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 1.3e-08 63.9 46 63.0
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.3e-08 63.9 73 41.1
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.3e-08 63.9 54 50.0
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 3.9e-08 62.4 56 50.0
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.9e-07 60.1 54 48.1
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 1.6e-06 57.0 46 52.2


User provided reference genes

Program Settings