Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 8.9e-142 506.9 252 100.0
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 1.2e-127 459.9 250 89.6
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 1.8e-126 456.1 250 87.6
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 1.8e-126 456.1 250 88.0
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 6.8e-126 454.1 252 86.5
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.5e-125 453.0 252 86.9
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.2e-124 449.1 252 86.1
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 2.4e-123 445.7 250 86.4
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 9.2e-123 443.7 252 85.3
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 1.6e-122 443.0 250 86.0
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 6.0e-122 441.0 250 84.4
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 1.3e-121 439.9 250 84.4
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 2.3e-121 439.1 250 83.6
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.3e-121 439.1 250 85.2
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 3.0e-121 438.7 249 85.1
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 3.9e-121 438.3 250 84.0
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 3.9e-121 438.3 250 84.0
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 5.1e-121 438.0 250 84.0
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 6.6e-121 437.6 249 83.9
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 2.5e-120 435.6 250 83.2
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 2.5e-120 435.6 250 83.2
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 4.3e-120 434.9 250 84.0
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 5.6e-120 434.5 250 82.8
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 9.5e-120 433.7 250 83.6
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 9.5e-120 433.7 250 82.0
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.2e-119 433.3 250 82.0
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 1.2e-119 433.3 250 81.2
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 1.6e-119 433.0 250 82.4
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 2.1e-119 432.6 250 83.2
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 2.1e-119 432.6 250 82.4
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 2.8e-119 432.2 250 82.4
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 4.7e-119 431.4 249 83.5
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 4.7e-119 431.4 250 82.4
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 4.7e-119 431.4 250 83.2
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 6.2e-119 431.0 249 83.5
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 6.2e-119 431.0 250 82.8
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 8.1e-119 430.6 250 83.6
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 1.1e-118 430.3 250 82.8
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 1.1e-118 430.3 249 82.3
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.4e-118 429.9 250 82.0
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 3.1e-118 428.7 304 72.0
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 3.1e-118 428.7 250 82.0
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 3.1e-118 428.7 249 81.9
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 4.0e-118 428.3 250 80.8
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 5.2e-118 427.9 250 81.2
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 8.9e-118 427.2 250 82.0
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 1.5e-117 426.4 249 82.7
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.5e-117 426.4 250 82.4
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 1.5e-117 426.4 249 83.5
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.0e-117 426.0 250 81.6
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 2.0e-117 426.0 249 83.9
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 2.6e-117 425.6 250 82.0
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 2.6e-117 425.6 250 82.0
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 3.4e-117 425.2 249 80.3
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 3.4e-117 425.2 250 81.6
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 3.4e-117 425.2 250 80.8
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 4.4e-117 424.9 249 79.5
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 4.4e-117 424.9 250 82.4
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 7.6e-117 424.1 250 81.2
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 7.6e-117 424.1 249 81.5
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 9.9e-117 423.7 250 80.8
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 9.9e-117 423.7 249 82.3
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 3.8e-116 421.8 250 82.4
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 3.8e-116 421.8 249 81.1
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 6.4e-116 421.0 249 81.9
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 4.2e-115 418.3 250 82.0
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 7.1e-115 417.5 235 83.4
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 9.2e-115 417.2 249 79.1
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 2.1e-114 416.0 250 80.4
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 2.1e-114 416.0 250 79.2
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 2.7e-114 415.6 249 79.5
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 2.7e-114 415.6 250 79.2
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 3.5e-114 415.2 250 80.0
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 4.6e-114 414.8 250 79.6
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 2.3e-113 412.5 250 80.0
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 6.6e-113 411.0 250 79.2
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 8.7e-113 410.6 250 78.8
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 1.1e-112 410.2 250 78.8
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 1.1e-112 410.2 250 78.8
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 1.1e-112 410.2 250 78.8
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 1.1e-112 410.2 250 78.8
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 1.1e-112 410.2 250 78.4
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 3.3e-112 408.7 249 79.5
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 3.3e-112 408.7 250 78.0
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 2.1e-111 406.0 236 82.2
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 1.1e-110 403.7 249 78.7
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 1.1e-110 403.7 249 78.3
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 1.4e-110 403.3 250 76.4
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 3.1e-110 402.1 235 82.1
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 4.0e-110 401.7 237 81.4
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 2.0e-109 399.4 249 77.5
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 2.6e-109 399.1 249 77.5
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 3.4e-109 398.7 249 77.9
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 1.3e-108 396.7 249 76.7
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 8.4e-108 394.0 250 75.2
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 4.2e-107 391.7 249 74.3
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 1.6e-106 389.8 325 61.2
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.6e-106 389.8 250 74.4
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 2.3e-105 386.0 249 74.3
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 3.0e-105 385.6 242 75.6
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 1.5e-104 383.3 248 73.4
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 8.1e-103 377.5 217 84.3
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 1.7e-100 369.8 268 69.8
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 2.2e-100 369.4 217 81.6
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 2.5e-96 355.9 250 70.8
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 1.1e-94 350.5 217 77.9
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 1.3e-92 343.6 235 68.5
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.3e-87 327.0 260 66.5
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 2.0e-85 319.7 211 76.3
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 7.6e-85 317.8 250 63.6
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 7.6e-85 317.8 247 62.3
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 2.0e-77 293.1 250 64.0
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 3.4e-77 292.4 250 62.4
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 3.9e-65 252.3 217 63.1
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 2.0e-61 240.0 238 49.6
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 1.0e-60 237.7 247 48.6
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 1.1e-59 234.2 150 76.0
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.2e-59 232.6 122 86.1
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 8.0e-58 228.0 236 49.6
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.3e-57 226.5 130 87.7
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.3e-57 226.5 130 87.7
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.7e-55 219.2 123 81.3
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 4.8e-55 218.8 122 82.0
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 8.2e-55 218.0 247 44.9
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 2.0e-53 213.4 125 84.8
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 5.9e-53 211.8 122 80.3
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 1.5e-51 207.2 170 65.3
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 4.7e-50 202.2 227 45.4
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 4.0e-49 199.1 109 82.6
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 3.2e-43 179.5 236 39.4
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 2.6e-40 169.9 247 38.9
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 4.5e-37 159.1 98 79.6
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 4.5e-37 159.1 91 87.9
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 4.3e-27 125.9 215 33.5
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 1.6e-26 124.0 65 87.7
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 3.6e-26 122.9 140 52.1
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 6.1e-26 122.1 65 86.2
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 1.8e-25 120.6 65 84.6
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 1.2e-24 117.9 65 84.6
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.9e-22 110.5 65 76.9
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 9.5e-19 98.2 52 84.6
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 9.5e-19 98.2 52 84.6
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 9.5e-19 98.2 52 84.6
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 4.7e-18 95.9 52 80.8
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 1.1e-17 94.7 154 38.3
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 5.2e-17 92.4 50 82.0
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 5.2e-17 92.4 52 80.8
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 2.6e-16 90.1 47 85.1
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 8.3e-15 85.1 47 83.0
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 4.1e-14 82.8 160 38.8
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 7.8e-13 78.6 41 87.8
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 4.7e-10 69.3 46 67.4
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 1.9e-06 57.4 92 46.7


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