Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 6.1e-79 297.7 187 100.0
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 7.2e-56 221.1 185 82.7
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 3.6e-39 165.6 185 71.4
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 4.7e-23 112.1 231 39.8
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 6.0e-18 95.1 256 43.8
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 6.0e-18 95.1 52 92.3
Actinidia06521 Actinidia chinensis HOM05D009440 ORTHO05D011919 1.7e-17 93.6 119 54.6
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 5.6e-16 88.6 52 82.7
Actinidia27134 Actinidia chinensis HOM05D009440 ORTHO05D011919 4.7e-15 85.5 109 48.6
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 5.2e-14 82.0 51 76.5
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 1.2e-13 80.9 60 66.7
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 1.2e-13 80.9 60 65.0
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 2.0e-13 80.1 60 61.7
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 4.4e-13 79.0 60 60.0
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 4.4e-13 79.0 61 60.7
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 5.8e-13 78.6 54 66.7
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 5.8e-13 78.6 60 61.7
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 5.8e-13 78.6 60 61.7
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 9.9e-13 77.8 60 60.0
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 9.9e-13 77.8 60 63.3
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 1.3e-12 77.4 60 61.7
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 1.3e-12 77.4 60 61.7
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 1.3e-12 77.4 61 59.0
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.3e-12 77.4 60 60.0
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 1.3e-12 77.4 60 60.0
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.3e-12 77.4 60 63.3
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 1.7e-12 77.0 60 60.0
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 1.7e-12 77.0 59 61.0
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 1.7e-12 77.0 60 60.0
Actinidia28829 Actinidia chinensis HOM05D009440 ORTHO05D004072 2.2e-12 76.6 117 65.0
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 2.2e-12 76.6 51 70.6
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 2.2e-12 76.6 60 58.3
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 2.2e-12 76.6 60 61.7
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 2.9e-12 76.3 60 61.7
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 3.7e-12 75.9 60 61.7
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 3.7e-12 75.9 60 60.0
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 3.7e-12 75.9 60 58.3
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 3.7e-12 75.9 60 58.3
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 3.7e-12 75.9 60 58.3
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 3.7e-12 75.9 61 60.7
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 4.9e-12 75.5 60 61.7
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 4.9e-12 75.5 60 60.0
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 4.9e-12 75.5 60 60.0
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 6.4e-12 75.1 56 60.7
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 6.4e-12 75.1 60 61.7
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 8.4e-12 74.7 60 56.7
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.1e-11 74.3 60 58.3
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 1.4e-11 73.9 56 60.7
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 1.9e-11 73.6 60 58.3
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 2.4e-11 73.2 60 56.7
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 2.4e-11 73.2 60 58.3
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 3.2e-11 72.8 60 56.7
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 3.2e-11 72.8 60 60.0
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 3.2e-11 72.8 60 56.7
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 3.2e-11 72.8 60 58.3
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 5.4e-11 72.0 62 54.8
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 9.2e-11 71.2 60 56.7
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 9.2e-11 71.2 60 58.3
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 9.2e-11 71.2 61 54.1
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 1.2e-10 70.9 60 58.3
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 1.2e-10 70.9 61 54.1
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 3.5e-10 69.3 60 51.7
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 3.5e-10 69.3 61 54.1
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 3.5e-10 69.3 60 55.0
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 3.5e-10 69.3 62 58.1
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 4.6e-10 68.9 61 50.8
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 4.6e-10 68.9 60 53.3
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 4.6e-10 68.9 50 62.0
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 4.6e-10 68.9 51 58.8
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 6.0e-10 68.6 60 56.7
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 6.0e-10 68.6 60 56.7
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 6.0e-10 68.6 60 51.7
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 6.0e-10 68.6 60 55.0
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 7.8e-10 68.2 51 58.8
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 1.0e-09 67.8 61 50.8
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 1.0e-09 67.8 60 53.3
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 1.0e-09 67.8 57 56.1
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 1.3e-09 67.4 60 53.3
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.7e-09 67.0 79 43.0
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 2.3e-09 66.6 60 51.7
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 2.3e-09 66.6 51 54.9
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 3.0e-09 66.2 51 58.8
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 3.0e-09 66.2 61 45.9
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 3.0e-09 66.2 61 47.5
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 3.0e-09 66.2 61 47.5
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 3.0e-09 66.2 61 47.5
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 3.0e-09 66.2 61 47.5
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 3.0e-09 66.2 61 47.5
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 3.9e-09 65.9 52 53.8
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 3.9e-09 65.9 59 54.2
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 6.6e-09 65.1 61 45.9
vmacro18565 Vaccinium macrocarpon HOM05D009440 ORTHO05D011088 6.6e-09 65.1 56 67.9
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 1.1e-08 64.3 59 50.8
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 1.1e-08 64.3 60 48.3
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 1.9e-08 63.5 61 50.8
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 2.5e-08 63.2 45 60.0
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 4.3e-08 62.4 51 60.8
Actinidia06522 Actinidia chinensis HOM05D009440 ORTHO05D011919 9.6e-08 61.2 113 66.4
vmacro18395 Vaccinium macrocarpon HOM05D007742 ORTHO05D004072 9.6e-08 61.2 41 75.6
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 3.6e-07 59.3 45 57.8
Actinidia25317 Actinidia chinensis HOM05D009440 ORTHO05D011919 8.1e-07 58.2 117 40.2
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.1e-06 57.8 127 48.8
Dinv01629 Davidia involucrata HOM05D009440 ORTHO05D011088 1.4e-06 57.4 46 80.4
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 1.4e-06 57.4 51 52.9
Actinidia28830 Actinidia chinensis HOM05D009440 ORTHO05D011088 3.1e-06 56.2 56 62.5
FAN16G1042 Fragaria x ananassa HOM05D011613 ORTHO05D011088 6.8e-06 55.1 118 40.7
FAN23G0370 Fragaria x ananassa HOM05D019411 ORTHO05D011088 6.8e-06 55.1 123 43.1


User provided reference genes

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