Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18191 Vaccinium macrocarpon HOM05D009987 ORTHO05D010465 2.5e-72 275.4 144 100.0
FAN09G0586 Fragaria x ananassa HOM05D009987 ORTHO05D010465 7.1e-27 124.4 133 59.4
Cfa007553 Carpinus fangiana HOM05D009987 ORTHO05D010465 5.8e-21 104.8 134 53.0
CSS0049432 Camellia sinensis var. sinensis HOM05D009987 ORTHO05D010465 3.5e-18 95.5 131 48.9
CSS0008541 Camellia sinensis var. sinensis HOM05D009987 ORTHO05D010465 3.3e-16 89.0 129 47.3
arahy.Tifrunner.gnm1.ann1.X9WA5F Arachis hypogaea HOM05D009987 ORTHO05D010465 7.3e-16 87.8 129 45.7
arahy.Tifrunner.gnm1.ann1.VDH4YT Arachis hypogaea HOM05D009987 ORTHO05D010465 2.1e-15 86.3 129 45.7
Sabra17G0073600 Salix brachista HOM05D009987 ORTHO05D010465 2.8e-15 85.9 65 70.8
arahy.Tifrunner.gnm1.ann1.C5T4VQ Arachis hypogaea HOM05D009987 ORTHO05D010465 2.6e-13 79.3 128 44.5
FAN13G0968 Fragaria x ananassa HOM05D009987 ORTHO05D010465 8.4e-12 74.3 63 66.7
FAN04G1106 Fragaria x ananassa HOM05D009987 ORTHO05D010465 1.9e-11 73.2 64 64.1
FAN08G0761 Fragaria x ananassa HOM05D009987 ORTHO05D010465 1.9e-11 73.2 64 64.1
Nitab4.5_0001128g0180 Nicotiana tabacum HOM05D009987 ORTHO05D010465 4.2e-11 72.0 140 42.9
Nitab4.5_0006000g0050 Nicotiana tabacum HOM05D009987 ORTHO05D010465 5.4e-11 71.6 132 43.2
TPR.G21388 Trifolium pratense HOM05D009987 ORTHO05D010465 3.5e-10 68.9 113 40.7
Oeu011862.1 Olea europaea HOM05D009987 ORTHO05D010465 3.0e-09 65.9 129 43.4
Haze_07327 Corylus avellana HOM05D009987 ORTHO05D010465 5.1e-09 65.1 131 40.5
Atru.chr8.160 Acer truncatum HOM05D009987 ORTHO05D010465 1.5e-08 63.5 128 40.6
TAR622G1125 Trochodendron aralioides HOM05D009987 ORTHO05D010465 1.5e-08 63.5 129 43.4
Actinidia36009 Actinidia chinensis HOM05D000270 ORTHO05D000163 1.6e-07 60.1 43 76.7
Haze_14529 Corylus avellana HOM05D000270 ORTHO05D000163 1.6e-07 60.1 47 72.3
Haze_14532 Corylus avellana HOM05D000270 ORTHO05D000163 1.6e-07 60.1 47 72.3
Actinidia06095 Actinidia chinensis HOM05D000270 ORTHO05D000163 2.1e-07 59.7 45 73.3
CSS0003777 Camellia sinensis var. sinensis HOM05D010327 ORTHO05D010465 2.1e-07 59.7 73 53.4
CSS0025370 Camellia sinensis var. sinensis HOM05D010327 ORTHO05D010465 2.1e-07 59.7 73 53.4
FAN02G3792 Fragaria x ananassa HOM05D000270 ORTHO05D000163 2.1e-07 59.7 45 73.3
MD17G1041500 Malus domestica HOM05D000270 ORTHO05D000163 2.8e-07 59.3 47 72.3
Manes.02G046400 Manihot esculenta HOM05D000270 ORTHO05D000163 4.8e-07 58.5 46 71.7
FAN05G3228 Fragaria x ananassa HOM05D000270 ORTHO05D000163 6.2e-07 58.2 47 68.1
FvH4_6g48590 Fragaria vesca HOM05D000270 ORTHO05D000163 1.1e-06 57.4 45 71.1
FAN14G3407 Fragaria x ananassa HOM05D000270 ORTHO05D000163 1.1e-06 57.4 45 71.1
FAN14G4013 Fragaria x ananassa HOM05D000270 ORTHO05D000163 1.1e-06 57.4 45 71.1
ClCG10G015020 Citrullus lanatus HOM05D009987 ORTHO05D010465 2.4e-06 56.2 129 39.5
FAN09G4393 Fragaria x ananassa HOM05D000270 ORTHO05D000163 2.4e-06 56.2 45 68.9
CANSAT64G2367 Cannabis sativa HOM05D000270 ORTHO05D000163 3.1e-06 55.8 45 64.4
Potri.017G083000 Populus trichocarpa HOM05D000270 ORTHO05D000163 3.1e-06 55.8 46 69.6
RcHm_v2.0_Chr2g0168411 Rosa chinensis HOM05D000270 ORTHO05D000163 4.0e-06 55.5 43 69.8
GSVIVG01011412001 Vitis vinifera HOM05D000270 ORTHO05D000163 5.3e-06 55.1 45 75.6
Manes.01G091100 Manihot esculenta HOM05D000270 ORTHO05D000163 6.9e-06 54.7 46 65.2
QL02p082184 Quercus lobata HOM05D000270 ORTHO05D000163 6.9e-06 54.7 46 65.2
Thecc.04G082000 Theobroma cacao HOM05D000270 ORTHO05D000163 6.9e-06 54.7 47 66.0
CiPaw.03G026900 Carya illinoinensis HOM05D000270 ORTHO05D000163 9.0e-06 54.3 46 65.2
Prupe.3G267600 Prunus persica HOM05D000270 ORTHO05D000163 9.0e-06 54.3 45 68.9
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.0e-06 54.3 70 48.6


User provided reference genes

Program Settings