Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18088 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 6.4e-15 83.6 67 100.0
Cc00_g21590 Coffea canephora HOM05D002873 ORTHO05D002978 6.0e-13 77.0 67 88.1
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 5.6e-11 70.5 67 73.1
Migut.N00988 Erythranthe guttata HOM05D002873 ORTHO05D002978 9.6e-11 69.7 67 86.6
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.3e-10 69.3 67 76.1
vmacro18087 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 1.3e-10 69.3 67 88.1
Migut.N00991 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.6e-10 68.9 67 86.6
Cc07_g04790 Coffea canephora HOM05D002873 ORTHO05D002978 2.8e-10 68.2 67 88.1
Solyc02g065640.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 3.7e-10 67.8 67 79.1
Sopen02g015850 Solanum pennellii HOM05D002873 ORTHO05D002978 1.1e-09 66.2 67 77.6
CAN.G497.26 Capsicum annuum HOM05D002873 ORTHO05D002978 1.4e-09 65.9 67 83.6
CAN.G497.27 Capsicum annuum HOM05D002873 ORTHO05D002978 1.4e-09 65.9 67 83.6
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.4e-09 65.9 67 68.7
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.4e-09 65.9 67 74.6
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 1.4e-09 65.9 67 65.7
Oeu032858.1 Olea europaea HOM05D002873 ORTHO05D002978 1.8e-09 65.5 67 79.1
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 1.8e-09 65.5 67 65.7
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 4.0e-09 64.3 67 68.7
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 4.0e-09 64.3 67 68.7
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 5.3e-09 63.9 67 62.7
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 9.0e-09 63.2 67 71.6
Nitab4.5_0015566g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 9.0e-09 63.2 67 79.1
CSS0045706 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 1.5e-08 62.4 67 74.6
CSS0047860 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 1.5e-08 62.4 67 74.6
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 1.5e-08 62.4 67 55.2
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 1.5e-08 62.4 66 60.6
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 1.5e-08 62.4 67 52.2
vmacro18089 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 1.5e-08 62.4 67 83.6
Peaxi162Scf01056g00020 Petunia axillaris HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 73.1
PGSC0003DMG400010052 Solanum tuberosum HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 79.1
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 3.4e-08 61.2 66 54.5
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 3.4e-08 61.2 66 54.5
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 3.4e-08 61.2 66 54.5
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 3.4e-08 61.2 67 53.7
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 4.5e-08 60.8 67 52.2
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 4.5e-08 60.8 66 62.1
Solyc02g089580.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 4.5e-08 60.8 67 77.6
Thhalv10028020m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 5.8e-08 60.5 65 78.5
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 7.6e-08 60.1 66 63.6
Oeu049338.1 Olea europaea HOM05D002873 ORTHO05D002978 1.0e-07 59.7 67 77.6
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 1.0e-07 59.7 66 53.0
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 1.3e-07 59.3 66 75.8
Nitab4.5_0006224g0060 Nicotiana tabacum HOM05D002873 ORTHO05D002978 1.7e-07 58.9 65 55.4
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 1.7e-07 58.9 67 52.2
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 1.7e-07 58.9 66 53.0
Rhsim08G0081200 Rhododendron simsii HOM05D002873 ORTHO05D002978 1.7e-07 58.9 67 80.6
Rhsim08G0081300 Rhododendron simsii HOM05D002873 ORTHO05D002978 1.7e-07 58.9 33 90.9
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 1.7e-07 58.9 66 72.7
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 2.2e-07 58.5 66 63.6
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 2.2e-07 58.5 67 62.7
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 2.9e-07 58.2 67 50.7
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 2.9e-07 58.2 66 51.5
PGR042G3018 Punica granatum HOM05D002873 ORTHO05D002978 2.9e-07 58.2 66 74.2
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 2.9e-07 58.2 66 71.2
Sed0018699 Sechium edule HOM05D002873 ORTHO05D002978 2.9e-07 58.2 66 74.2
Solyc02g089590.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 2.9e-07 58.2 67 74.6
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 3.8e-07 57.8 66 53.0
Nitab4.5_0012845g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 3.8e-07 57.8 67 70.1
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 3.8e-07 57.8 66 69.7
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 3.8e-07 57.8 66 51.5
Sopen02g034310 Solanum pennellii HOM05D002873 ORTHO05D002978 4.9e-07 57.4 67 76.1
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 4.9e-07 57.4 67 49.3
Actinidia36291 Actinidia chinensis HOM05D002873 ORTHO05D002978 6.5e-07 57.0 67 67.2
Nitab4.5_0001324g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 8.4e-07 56.6 67 76.1
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 8.4e-07 56.6 66 66.7
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 8.4e-07 56.6 66 66.7
AT3G02480 Arabidopsis thaliana HOM05D002873 ORTHO05D002978 1.4e-06 55.8 66 53.0
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 1.4e-06 55.8 64 50.0
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 1.4e-06 55.8 66 54.5
Peaxi162Scf00479g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 49.3
Thecc.04G146000 Theobroma cacao HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 74.2
Aqoxy6G00630 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 2.5e-06 55.1 67 49.3
CSS0040391 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 2.5e-06 55.1 33 84.8
Glyma.19G040000 Glycine max HOM05D002873 ORTHO05D002978 2.5e-06 55.1 61 73.8
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 62.1
Sabra04G0074500 Salix brachista HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 69.7
TWI32G0493 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 2.5e-06 55.1 67 74.6
BcaC01g04444 Brassica carinata HOM05D002873 ORTHO05D002978 3.2e-06 54.7 65 60.0
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 3.2e-06 54.7 66 47.0
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 3.2e-06 54.7 66 47.0
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 3.2e-06 54.7 66 47.0
C03p40070 Brassica napus HOM05D002873 ORTHO05D002978 3.2e-06 54.7 65 60.0
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 3.2e-06 54.7 66 47.0
BolC3t16273H Brassica oleracea HOM05D002873 ORTHO05D002978 3.2e-06 54.7 65 60.0
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 3.2e-06 54.7 66 47.0
Peaxi162Scf00479g00427 Petunia axillaris HOM05D002873 ORTHO05D002978 3.2e-06 54.7 67 71.6
Sed0007664 Sechium edule HOM05D002873 ORTHO05D002978 3.2e-06 54.7 60 81.7
Aqoxy6G02621 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 4.2e-06 54.3 67 47.8
CiPaw.03G007000 Carya illinoinensis HOM05D002873 ORTHO05D002978 4.2e-06 54.3 67 71.6
Medtr7g020780 Medicago truncatula HOM05D002873 ORTHO05D002978 4.2e-06 54.3 67 50.7
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 4.2e-06 54.3 64 48.4
SalBow1G5754 Salvia bowleyana HOM05D002873 ORTHO05D002978 4.2e-06 54.3 67 76.1
SalBow1G7560 Salvia bowleyana HOM05D002873 ORTHO05D002978 4.2e-06 54.3 33 81.8
AL3G11800 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 47.0
A03p32950 Brassica napus HOM05D002873 ORTHO05D002978 5.5e-06 53.9 65 58.5
A10p11190 Brassica napus HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 69.7
BraA03t12463Z Brassica rapa HOM05D002873 ORTHO05D002978 5.5e-06 53.9 65 58.5
Carub.0003s0158 Capsella rubella HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 47.0
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 62.1
FAN05G2856 Fragaria x ananassa HOM05D040180 ORTHO05D035606 5.5e-06 53.9 67 76.1
HanXRQChr12g0380071 Helianthus annuus HOM05D021913 ORTHO05D002978 5.5e-06 53.9 67 67.2
Lalb_Chr06g0174781 Lupinus albus HOM05D002873 ORTHO05D002978 5.5e-06 53.9 65 75.4
TWI60G1570 Tripterygium wilfordii HOM05D021913 ORTHO05D002978 5.5e-06 53.9 67 74.6
Cfa018418 Carpinus fangiana HOM05D002873 ORTHO05D002978 7.1e-06 53.5 67 67.2
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 7.1e-06 53.5 62 50.0
Migut.K00873 Erythranthe guttata HOM05D002873 ORTHO05D002978 7.1e-06 53.5 67 73.1
Peaxi162Scf00019g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 7.1e-06 53.5 33 81.8
Psat3g146600 Pisum sativum HOM05D048780 ORTHO05D050391 7.1e-06 53.5 67 74.6
BcaB08g35740 Brassica carinata HOM05D002873 ORTHO05D002978 9.3e-06 53.1 66 71.2
Ca_20748_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 9.3e-06 53.1 67 74.6


User provided reference genes

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