Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18087 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 3.0e-12 74.7 67 100.0
vmacro18088 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 7.4e-11 70.1 67 88.1
Cc07_g04790 Coffea canephora HOM05D002873 ORTHO05D002978 1.6e-10 68.9 67 94.0
Cc00_g21590 Coffea canephora HOM05D002873 ORTHO05D002978 4.8e-10 67.4 67 80.6
vmacro18089 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 2.4e-09 65.1 67 92.5
CAN.G497.26 Capsicum annuum HOM05D002873 ORTHO05D002978 3.1e-09 64.7 67 86.6
CAN.G497.27 Capsicum annuum HOM05D002873 ORTHO05D002978 3.1e-09 64.7 67 86.6
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 4.0e-09 64.3 67 68.7
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 5.3e-09 63.9 67 67.2
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 5.3e-09 63.9 67 64.2
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 5.3e-09 63.9 67 64.2
Migut.N00991 Erythranthe guttata HOM05D002873 ORTHO05D002978 9.0e-09 63.2 67 83.6
CSS0045706 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 1.5e-08 62.4 67 77.6
CSS0047860 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 1.5e-08 62.4 67 77.6
Migut.N00988 Erythranthe guttata HOM05D002873 ORTHO05D002978 2.0e-08 62.0 67 80.6
Peaxi162Scf01056g00020 Petunia axillaris HOM05D002873 ORTHO05D002978 2.0e-08 62.0 67 77.6
PGSC0003DMG400010052 Solanum tuberosum HOM05D002873 ORTHO05D002978 2.0e-08 62.0 67 83.6
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 70.1
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 68.7
Solyc02g065640.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 74.6
Sopen02g015850 Solanum pennellii HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 74.6
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 3.4e-08 61.2 67 71.6
Solyc02g089580.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 3.4e-08 61.2 67 82.1
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 7.6e-08 60.1 67 67.2
SalBow1G5754 Salvia bowleyana HOM05D002873 ORTHO05D002978 1.0e-07 59.7 67 88.1
Oeu032858.1 Olea europaea HOM05D002873 ORTHO05D002978 1.3e-07 59.3 67 74.6
Nitab4.5_0015566g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 2.2e-07 58.5 67 76.1
Oeu049338.1 Olea europaea HOM05D002873 ORTHO05D002978 2.2e-07 58.5 67 80.6
Solyc02g089590.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 2.2e-07 58.5 67 79.1
Nitab4.5_0012845g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 2.9e-07 58.2 67 74.6
Actinidia36291 Actinidia chinensis HOM05D002873 ORTHO05D002978 3.8e-07 57.8 67 73.1
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 3.8e-07 57.8 67 58.2
Rhsim08G0081300 Rhododendron simsii HOM05D002873 ORTHO05D002978 3.8e-07 57.8 32 90.6
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 3.8e-07 57.8 67 49.3
Sopen02g034310 Solanum pennellii HOM05D002873 ORTHO05D002978 3.8e-07 57.8 67 80.6
Rhsim08G0081200 Rhododendron simsii HOM05D002873 ORTHO05D002978 4.9e-07 57.4 67 82.1
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 6.5e-07 57.0 67 67.2
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 49.3
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 1.1e-06 56.2 66 56.1
Nitab4.5_0001324g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 79.1
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 74.2
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 50.0
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 50.0
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 50.0
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 2.5e-06 55.1 67 49.3
SalBow1G7560 Salvia bowleyana HOM05D002873 ORTHO05D002978 2.5e-06 55.1 32 87.5
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 3.2e-06 54.7 67 50.7
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 4.2e-06 54.3 67 49.3
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 4.2e-06 54.3 66 56.1
Thhalv10028020m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 4.2e-06 54.3 65 73.8
SpUn0185_0020 Schrenkiella parvula HOM05D002873 ORTHO05D002978 4.2e-06 54.3 65 84.6
CSS0040391 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 5.5e-06 53.9 32 84.4
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 59.1
SalBow1G4481 Salvia bowleyana HOM05D002873 ORTHO05D002978 5.5e-06 53.9 32 84.4
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 48.5
PGR042G3018 Punica granatum HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 71.2


User provided reference genes

Program Settings