Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18086 Vaccinium macrocarpon HOM05D002472 ORTHO05D002827 5.0e-129 464.5 249 100.0
vmacro18108 Vaccinium macrocarpon HOM05D002472 ORTHO05D002827 8.5e-28 128.3 301 35.5
Pp3c26_130 Physcomitrium patens HOM05D002472 ORTHO05D002827 2.0e-08 63.9 57 50.9
Gohir.D11G265400 Gossypium hirsutum HOM05D002472 ORTHO05D002827 5.7e-08 62.4 133 31.6
Hund22109 Selenicereus undatus HOM05D002472 ORTHO05D002827 5.7e-08 62.4 113 33.6
Peaxi162Scf00404g00027 Petunia axillaris HOM05D002472 ORTHO05D002827 7.5e-08 62.0 87 37.9
Sed0025137 Sechium edule HOM05D002472 ORTHO05D002827 7.5e-08 62.0 74 41.9
Solyc01g097860.4 Solanum lycopersicum HOM05D002472 ORTHO05D002827 9.7e-08 61.6 85 36.5
Cc02_g31610 Coffea canephora HOM05D002472 ORTHO05D002827 1.3e-07 61.2 96 36.5
Manes.03G179100 Manihot esculenta HOM05D002472 ORTHO05D002827 1.3e-07 61.2 113 37.2
COL.COLO4_15279 Corchorus olitorius HOM05D002472 ORTHO05D002827 1.7e-07 60.8 116 34.5
Pp3c9_18900 Physcomitrium patens HOM05D002472 ORTHO05D002827 1.7e-07 60.8 57 47.4
CAN.G134.169 Capsicum annuum HOM05D002472 ORTHO05D002827 2.2e-07 60.5 113 32.7
Ciclev10001390m.g Citrus clementina HOM05D002472 ORTHO05D002827 2.2e-07 60.5 113 32.7
COL.COLO4_15281 Corchorus olitorius HOM05D002472 ORTHO05D002827 2.2e-07 60.5 113 33.6
Glyma.03G245400 Glycine max HOM05D002472 ORTHO05D002827 2.8e-07 60.1 85 35.3
Sopen01g041460 Solanum pennellii HOM05D002472 ORTHO05D002827 2.8e-07 60.1 85 35.3
EL10Ac4g09186 Beta vulgaris HOM05D002472 ORTHO05D002827 3.7e-07 59.7 113 33.6
Manes.09G156400 Manihot esculenta HOM05D002472 ORTHO05D002827 3.7e-07 59.7 79 40.5
Actinidia05762 Actinidia chinensis HOM05D002472 ORTHO05D002827 4.8e-07 59.3 85 36.5
AagrBONN_evm.TU.Sc2ySwM_368.470 Anthoceros agrestis HOM05D002472 ORTHO05D002827 4.8e-07 59.3 57 43.9
CANSAT54G0369 Cannabis sativa HOM05D002472 ORTHO05D002827 4.8e-07 59.3 113 31.9
Migut.N01927 Erythranthe guttata HOM05D002472 ORTHO05D002827 4.8e-07 59.3 79 38.0
Glyma.19G242800 Glycine max HOM05D002472 ORTHO05D002827 4.8e-07 59.3 113 31.9
Lsat_1_v5_gn_2_65180 Lactuca sativa HOM05D002472 ORTHO05D002827 4.8e-07 59.3 128 30.5
Manes.08G127900 Manihot esculenta HOM05D002472 ORTHO05D002827 4.8e-07 59.3 113 33.6
Potri.005G049500 Populus trichocarpa HOM05D002472 ORTHO05D002827 4.8e-07 59.3 113 32.7
Atru.chr2.723 Acer truncatum HOM05D002472 ORTHO05D002827 6.3e-07 58.9 113 32.7
Cfa006468 Carpinus fangiana HOM05D002472 ORTHO05D002827 6.3e-07 58.9 113 32.7
CiPaw.07G006900 Carya illinoinensis HOM05D002472 ORTHO05D002827 6.3e-07 58.9 113 34.5
COL.COLO4_15282 Corchorus olitorius HOM05D002472 ORTHO05D002827 6.3e-07 58.9 113 33.6
DCAR_006611 Daucus carota HOM05D002472 ORTHO05D002827 6.3e-07 58.9 85 36.5
SMO337G0037 Selaginella moellendorffii HOM05D002472 ORTHO05D002827 6.3e-07 58.9 57 43.9
PGSC0003DMG400022472 Solanum tuberosum HOM05D002472 ORTHO05D002827 6.3e-07 58.9 85 35.3
Actinidia30924 Actinidia chinensis HOM05D002472 ORTHO05D002827 8.2e-07 58.5 113 32.7
CSS0020760 Camellia sinensis var. sinensis HOM05D002472 ORTHO05D002827 8.2e-07 58.5 113 32.7
Carub.0002s0919 Capsella rubella HOM05D002472 ORTHO05D002827 8.2e-07 58.5 113 32.7
CiPaw.08G179100 Carya illinoinensis HOM05D002472 ORTHO05D002827 8.2e-07 58.5 113 32.7
Dinv17758 Davidia involucrata HOM05D002472 ORTHO05D002827 8.2e-07 58.5 113 32.7
Gorai.007G285400 Gossypium raimondii HOM05D002472 ORTHO05D002827 8.2e-07 58.5 85 35.3
Nitab4.5_0002361g0140 Nicotiana tabacum HOM05D002472 ORTHO05D002827 8.2e-07 58.5 85 35.3
PGR004G0868 Punica granatum HOM05D002472 ORTHO05D002827 8.2e-07 58.5 74 40.5
Sabra05G0044700 Salix brachista HOM05D002472 ORTHO05D002827 8.2e-07 58.5 85 34.1
Sabra15G0050500 Salix brachista HOM05D002472 ORTHO05D002827 8.2e-07 58.5 85 34.1
Sabra15G0074400 Salix brachista HOM05D002472 ORTHO05D002827 8.2e-07 58.5 85 34.1
Cc02_g31530 Coffea canephora HOM05D002472 ORTHO05D002827 1.1e-06 58.2 94 40.4
Duzib128G0462 Durio zibethinus HOM05D002472 ORTHO05D002827 1.1e-06 58.2 113 31.9
FAN02G1997 Fragaria x ananassa HOM05D002472 ORTHO05D002827 1.1e-06 58.2 113 32.7
FAN05G1585 Fragaria x ananassa HOM05D002472 ORTHO05D002827 1.1e-06 58.2 113 32.7
FAN05G3932 Fragaria x ananassa HOM05D002472 ORTHO05D002827 1.1e-06 58.2 113 32.7
FAN09G3673 Fragaria x ananassa HOM05D002472 ORTHO05D002827 1.1e-06 58.2 113 32.7
FAN14G0010 Fragaria x ananassa HOM05D002472 ORTHO05D002827 1.1e-06 58.2 113 32.7
Gohir.A11G255600 Gossypium hirsutum HOM05D002472 ORTHO05D002827 1.1e-06 58.2 113 31.9
PSO832G0752 Papaver somniferum HOM05D002472 ORTHO05D002827 1.1e-06 58.2 113 31.9
QL03p024181 Quercus lobata HOM05D002472 ORTHO05D002827 1.1e-06 58.2 113 32.7
RcHm_v2.0_Chr3g0452121 Rosa chinensis HOM05D002472 ORTHO05D002827 1.1e-06 58.2 113 32.7
TWI36G0925 Tripterygium wilfordii HOM05D002472 ORTHO05D002827 1.1e-06 58.2 113 31.9
BolC1t02342H Brassica oleracea HOM05D002472 ORTHO05D002827 1.4e-06 57.8 113 31.9
MELO3C024679.2 Cucumis melo HOM05D002472 ORTHO05D002827 1.4e-06 57.8 113 31.9
CsaV3_1G045680 Cucumis sativus L. HOM05D002472 ORTHO05D002827 1.4e-06 57.8 113 31.9
Lsat_1_v5_gn_2_65020 Lactuca sativa HOM05D002472 ORTHO05D002827 1.4e-06 57.8 115 29.6
Lsat_1_v5_gn_2_65120 Lactuca sativa HOM05D002472 ORTHO05D002827 1.4e-06 57.8 68 38.2
Lalb_Chr18g0045101 Lupinus albus HOM05D002472 ORTHO05D002827 1.4e-06 57.8 113 31.9
Prupe.6G339400 Prunus persica HOM05D002472 ORTHO05D002827 1.4e-06 57.8 113 33.6
Sed0022641 Sechium edule HOM05D002472 ORTHO05D002827 1.4e-06 57.8 113 32.7
THA.LOC104821125 Tarenaya hassleriana HOM05D002472 ORTHO05D002827 1.4e-06 57.8 79 39.2
unitig_899.g15577 Utricularia gibba HOM05D002472 ORTHO05D002827 1.4e-06 57.8 113 33.6
Cpa.g.sc264.12 Carica papaya HOM05D002472 ORTHO05D002827 1.8e-06 57.4 79 39.2
Ca_09406_v3 Cicer arietinum L. HOM05D002472 ORTHO05D002827 1.8e-06 57.4 113 31.0
COL.COLO4_15276 Corchorus olitorius HOM05D002472 ORTHO05D002827 1.8e-06 57.4 113 31.9
ECA238G2290 Erigeron canadensis HOM05D002472 ORTHO05D001990 1.8e-06 57.4 113 31.0
Eucgr.H04386 Eucalyptus grandis HOM05D002472 ORTHO05D002827 1.8e-06 57.4 113 31.9
MD12G1236800 Malus domestica HOM05D002472 ORTHO05D002827 1.8e-06 57.4 115 33.0
Aqoxy5G00475 Aquilegia oxysepala HOM05D002472 ORTHO05D002827 2.4e-06 57.0 113 31.0
COL.COLO4_15277 Corchorus olitorius HOM05D002472 ORTHO05D002827 2.4e-06 57.0 79 39.2
Gohir.A11G298700 Gossypium hirsutum HOM05D002472 ORTHO05D002827 2.4e-06 57.0 79 39.2
Nitab4.5_0002840g0020 Nicotiana tabacum HOM05D002472 ORTHO05D002827 2.4e-06 57.0 85 34.1
Oeu021635.2 Olea europaea HOM05D002472 ORTHO05D002827 2.4e-06 57.0 113 31.0
Rhsim07G0175700 Rhododendron simsii HOM05D002472 ORTHO05D002827 2.4e-06 57.0 130 30.8
SalBow3G1967 Salvia bowleyana HOM05D002472 ORTHO05D002827 2.4e-06 57.0 79 38.0
Thecc.05G289000 Theobroma cacao HOM05D002472 ORTHO05D002827 2.4e-06 57.0 113 31.9
vmacro05069 Vaccinium macrocarpon HOM05D002472 ORTHO05D002827 2.4e-06 57.0 113 31.9
VMungo0540G0191 Vigna mungo HOM05D002472 ORTHO05D002827 2.4e-06 57.0 113 31.0
Zm00001eb053770 Zea mays HOM05D002472 ORTHO05D002827 2.4e-06 57.0 113 32.7
ATR0737G105 Amborella trichopoda HOM05D002472 ORTHO05D002827 3.1e-06 56.6 113 31.9
CARHR055610 Cardamine hirsuta HOM05D002472 ORTHO05D002827 3.1e-06 56.6 115 33.0
FAN09G2813 Fragaria x ananassa HOM05D002472 ORTHO05D002827 3.1e-06 56.6 54 48.1
FAN13G1811 Fragaria x ananassa HOM05D002472 ORTHO05D002827 3.1e-06 56.6 113 32.7
Lj1g0020326 Lotus japonicus HOM05D002472 ORTHO05D002827 3.1e-06 56.6 113 31.0
MD04G1220400 Malus domestica HOM05D002472 ORTHO05D002827 3.1e-06 56.6 115 33.0
PSO210G6821 Papaver somniferum HOM05D002472 ORTHO05D002827 3.1e-06 56.6 74 37.8
SGA_v2.0_scaffold196G40956 Striga asiatica HOM05D002472 ORTHO05D002827 3.1e-06 56.6 79 36.7
TAR142G0001 Trochodendron aralioides HOM05D002472 ORTHO05D002827 3.1e-06 56.6 113 31.9
AL1G64960 Arabidopsis lyrata HOM05D002472 ORTHO05D002827 4.1e-06 56.2 123 30.9
C01p23920 Brassica napus HOM05D002472 ORTHO05D002827 4.1e-06 56.2 74 37.8
Dinv11559 Davidia involucrata HOM05D002472 ORTHO05D002827 4.1e-06 56.2 113 31.9
Hma1.2p1_0332F.1_g127690 Hydrangea macrophylla HOM05D002472 ORTHO05D002827 4.1e-06 56.2 113 31.0
Medtr8g465010 Medicago truncatula HOM05D002472 ORTHO05D002827 4.1e-06 56.2 74 36.5
Psat3g008240 Pisum sativum HOM05D002472 ORTHO05D002827 4.1e-06 56.2 113 30.1
AUR62000974 Chenopodium quinoa HOM05D002472 ORTHO05D002827 5.3e-06 55.8 113 31.0
FAN05G2994 Fragaria x ananassa HOM05D002472 ORTHO05D002827 5.3e-06 55.8 54 48.1
FAN05G4815 Fragaria x ananassa HOM05D002472 ORTHO05D002827 5.3e-06 55.8 54 48.1
Mapoly0007s0090 Marchantia polymorpha HOM05D002472 ORTHO05D002827 5.3e-06 55.8 56 42.9
Medtr7g114660 Medicago truncatula HOM05D002472 ORTHO05D002827 5.3e-06 55.8 113 30.1
Nn4g26312 Nelumbo nucifera HOM05D002472 ORTHO05D002827 5.3e-06 55.8 79 38.0
Os03g0695500 Oryza sativa ssp. japonica HOM05D002472 ORTHO05D002827 5.3e-06 55.8 113 31.9
BcaC09g50560 Brassica carinata HOM05D002472 ORTHO05D002827 7.0e-06 55.5 74 37.8
AUR62004992 Chenopodium quinoa HOM05D002472 ORTHO05D002827 7.0e-06 55.5 113 31.0
RcHm_v2.0_Chr3g0452041 Rosa chinensis HOM05D002472 ORTHO05D002827 7.0e-06 55.5 54 46.3
GSVIVG01021855001 Vitis vinifera HOM05D002472 ORTHO05D002827 7.0e-06 55.5 113 31.0
AT1G54520 Arabidopsis thaliana HOM05D002472 ORTHO05D002827 9.1e-06 55.1 123 30.1
A01p18990 Brassica napus HOM05D002472 ORTHO05D002827 9.1e-06 55.1 74 37.8
BraA01t01842Z Brassica rapa HOM05D002472 ORTHO05D002827 9.1e-06 55.1 74 37.8
Carub.0002s0913 Capsella rubella HOM05D002472 ORTHO05D002827 9.1e-06 55.1 123 30.1
CDE10G0348 Ceratophyllum demersum HOM05D002472 ORTHO05D002827 9.1e-06 55.1 95 33.7
CDE10G0574 Ceratophyllum demersum HOM05D002472 ORTHO05D002827 9.1e-06 55.1 95 33.7
CDE10G1257 Ceratophyllum demersum HOM05D002472 ORTHO05D002827 9.1e-06 55.1 95 33.7
Gohir.D11G313500 Gossypium hirsutum HOM05D002472 ORTHO05D002827 9.1e-06 55.1 79 36.7
Gorai.007G344700 Gossypium raimondii HOM05D002472 ORTHO05D002827 9.1e-06 55.1 79 36.7
HPP92_023569 Vanilla planifolia HOM05D002472 ORTHO05D002827 9.1e-06 55.1 74 37.8


User provided reference genes

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