Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17948 Vaccinium macrocarpon HOM05D007198 ORTHO05D008969 5.9e-52 207.2 103 100.0
CSS0000534 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 1.9e-34 149.1 86 87.2
CSS0048673 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 1.9e-34 149.1 86 87.2
Actinidia16498 Actinidia chinensis HOM05D007198 ORTHO05D008969 1.8e-32 142.5 86 83.7
Dinv39859 Davidia involucrata HOM05D007198 ORTHO05D008969 7.5e-31 137.1 86 77.9
Hma1.2p1_0461F.1_g157845 Hydrangea macrophylla HOM05D007198 ORTHO05D008969 1.9e-29 132.5 86 77.9
Rhsim08G0101100 Rhododendron simsii HOM05D007198 ORTHO05D008969 3.3e-26 121.7 67 89.6
GSVIVG01022140001 Vitis vinifera HOM05D007198 ORTHO05D008969 9.5e-26 120.2 86 69.8
Thecc.01G054900 Theobroma cacao HOM05D007198 ORTHO05D008969 2.8e-25 118.6 85 68.2
CiPaw.01G018700 Carya illinoinensis HOM05D007198 ORTHO05D008969 3.6e-25 118.2 83 69.9
TWI09G1591 Tripterygium wilfordii HOM05D007198 ORTHO05D008969 6.2e-25 117.5 81 71.6
RcHm_v2.0_Chr2g0105351 Rosa chinensis HOM05D007198 ORTHO05D008969 8.1e-25 117.1 86 67.4
CsaV3_6G043210 Cucumis sativus L. HOM05D007198 ORTHO05D008969 1.1e-24 116.7 86 69.8
Manes.12G101406 Manihot esculenta HOM05D007198 ORTHO05D008969 1.4e-24 116.3 79 73.4
COL.COLO4_11404 Corchorus olitorius HOM05D007198 ORTHO05D008969 1.8e-24 115.9 105 60.0
Gohir.D12G068800 Gossypium hirsutum HOM05D007198 ORTHO05D008969 3.1e-24 115.2 87 64.4
Gorai.008G075300 Gossypium raimondii HOM05D007198 ORTHO05D008969 3.1e-24 115.2 87 64.4
QL06p041746 Quercus lobata HOM05D007198 ORTHO05D008969 3.1e-24 115.2 86 67.4
Ciclev10026429m.g Citrus clementina HOM05D007198 ORTHO05D008969 5.2e-24 114.4 91 65.9
ClCG01G016780 Citrullus lanatus HOM05D007198 ORTHO05D008969 8.9e-24 113.6 86 67.4
Sed0013660 Sechium edule HOM05D007198 ORTHO05D008969 8.9e-24 113.6 87 67.8
Cc07_g05960 Coffea canephora HOM05D007198 ORTHO05D008969 2.0e-23 112.5 75 77.3
Gohir.A12G069000 Gossypium hirsutum HOM05D007198 ORTHO05D008969 2.0e-23 112.5 87 63.2
Lsat_1_v5_gn_4_166740 Lactuca sativa HOM05D007198 ORTHO05D008969 2.0e-23 112.5 83 66.3
FAN23G1494 Fragaria x ananassa HOM05D007198 ORTHO05D008969 2.6e-23 112.1 86 64.0
Prupe.7G134300 Prunus persica HOM05D007198 ORTHO05D008969 3.4e-23 111.7 87 65.5
FvH4_1g15950 Fragaria vesca HOM05D007198 ORTHO05D008969 4.4e-23 111.3 86 64.0
FAN19G3022 Fragaria x ananassa HOM05D007198 ORTHO05D008969 4.4e-23 111.3 86 64.0
Migut.H00436 Erythranthe guttata HOM05D007198 ORTHO05D008969 5.8e-23 110.9 85 71.8
Eucgr.H01658 Eucalyptus grandis HOM05D007198 ORTHO05D008969 1.3e-22 109.8 88 67.0
DCAR_010899 Daucus carota HOM05D007198 ORTHO05D008969 1.7e-22 109.4 83 65.1
Nn1g04876 Nelumbo nucifera HOM05D007198 ORTHO05D008969 2.9e-22 108.6 94 60.6
Nitab4.5_0001034g0170 Nicotiana tabacum HOM05D007198 ORTHO05D008969 4.9e-22 107.8 95 63.2
MSTRG.2886 Avicennia marina HOM05D007198 ORTHO05D008969 6.4e-22 107.5 85 70.6
CAN.G836.78 Capsicum annuum HOM05D007198 ORTHO05D008969 2.4e-21 105.5 80 70.0
EL10Ac6g15754 Beta vulgaris HOM05D007198 ORTHO05D008969 4.2e-21 104.8 101 58.4
HanXRQChr07g0191591 Helianthus annuus HOM05D007198 ORTHO05D008969 5.4e-21 104.4 79 68.4
AUR62001938 Chenopodium quinoa HOM05D000362 ORTHO05D008969 9.2e-21 103.6 87 64.4
Aqoxy6G01332 Aquilegia oxysepala HOM05D007198 ORTHO05D008969 1.2e-20 103.2 82 62.2
Haze_15409 Corylus avellana HOM05D007198 ORTHO05D008969 1.2e-20 103.2 86 65.1
Sc16g0004690 Simmondsia chinensis HOM05D007198 ORTHO05D008969 2.7e-20 102.1 86 62.8
Nitab4.5_0002016g0040 Nicotiana tabacum HOM05D007198 ORTHO05D008969 4.6e-20 101.3 80 67.5
MD02G1301600 Malus domestica HOM05D007198 ORTHO05D008969 6.0e-20 100.9 88 64.8
ECA232G0395 Erigeron canadensis HOM05D007198 ORTHO05D008969 7.8e-20 100.5 77 68.8
CDE04G0918 Ceratophyllum demersum HOM05D007198 ORTHO05D008969 1.0e-19 100.1 104 51.9
AUR62003873 Chenopodium quinoa HOM05D007198 ORTHO05D008969 1.0e-19 100.1 87 63.2
TAR628G0194 Trochodendron aralioides HOM05D007198 ORTHO05D008969 1.3e-19 99.8 94 59.6
PSO210G2416 Papaver somniferum HOM05D007198 ORTHO05D008969 1.7e-19 99.4 86 59.3
MD02G1301800 Malus domestica HOM05D007198 ORTHO05D008969 3.9e-19 98.2 87 60.9
PGR102G0107 Punica granatum HOM05D007198 ORTHO05D008969 3.9e-19 98.2 84 63.1
SGA_v2.0_scaffold15G07292 Striga asiatica HOM05D007198 ORTHO05D008969 5.1e-19 97.8 90 62.2
Hund16328 Selenicereus undatus HOM05D007198 ORTHO05D008969 6.6e-19 97.4 80 66.2
arahy.Tifrunner.gnm1.ann1.ETA9G6 Arachis hypogaea HOM05D007198 ORTHO05D008969 8.7e-19 97.1 86 58.1
arahy.Tifrunner.gnm1.ann1.VZ1EEZ Arachis hypogaea HOM05D007198 ORTHO05D008969 8.7e-19 97.1 86 57.0
AT4G37020 Arabidopsis thaliana HOM05D007198 ORTHO05D008969 1.1e-18 96.7 83 60.2
BcaB03g12356 Brassica carinata HOM05D007198 ORTHO05D008969 1.1e-18 96.7 93 58.1
Sp7g34740 Schrenkiella parvula HOM05D007198 ORTHO05D008969 1.5e-18 96.3 81 60.5
AL7G13790 Arabidopsis lyrata HOM05D007198 ORTHO05D008969 1.9e-18 95.9 84 60.7
CARHR245490 Cardamine hirsuta HOM05D007198 ORTHO05D008969 1.9e-18 95.9 77 59.7
Thhalv10026229m.g Eutrema salsugineum HOM05D007198 ORTHO05D008969 2.5e-18 95.5 83 59.0
Medtr5g017490 Medicago truncatula HOM05D007198 ORTHO05D008969 2.5e-18 95.5 81 60.5
Atru.BG.94.p Acer truncatum HOM05D007198 ORTHO05D008969 3.3e-18 95.1 80 63.8
Aa31LG6G13950 Aethionema arabicum HOM05D007198 ORTHO05D008969 3.3e-18 95.1 99 54.5
CANSAT01G0326 Cannabis sativa HOM05D007198 ORTHO05D008969 3.3e-18 95.1 89 60.7
Duzib264G0904 Durio zibethinus HOM05D007198 ORTHO05D008969 3.3e-18 95.1 69 68.1
PSO170G6483 Papaver somniferum HOM05D007198 ORTHO05D008969 3.3e-18 95.1 86 57.0
A08p22530 Brassica napus HOM05D001349 ORTHO05D008727 5.6e-18 94.4 81 60.5
Solyc02g090750.4 Solanum lycopersicum HOM05D007198 ORTHO05D008969 9.6e-18 93.6 85 63.5
BcaC01g00428 Brassica carinata HOM05D007198 ORTHO05D008969 1.3e-17 93.2 82 61.0
C03p79670 Brassica napus HOM05D001349 ORTHO05D008727 1.3e-17 93.2 82 61.0
Ah.03g144920 Amaranthus hybridus HOM05D007198 ORTHO05D008969 1.6e-17 92.8 84 57.1
Sopen02g035380 Solanum pennellii HOM05D007198 ORTHO05D008969 2.8e-17 92.0 78 65.4
Carub.0007s0322 Capsella rubella HOM05D007198 ORTHO05D008969 3.6e-17 91.7 79 59.5
Peaxi162Scf00450g00621 Petunia axillaris HOM05D007198 ORTHO05D008969 3.6e-17 91.7 80 62.5
TPR.G21270 Trifolium pratense HOM05D007198 ORTHO05D008969 1.4e-16 89.7 83 56.6
Ca_24774_v3 Cicer arietinum L. HOM05D007198 ORTHO05D008969 2.4e-16 89.0 78 59.0
Glyma.01G185700 Glycine max HOM05D007198 ORTHO05D008969 3.1e-16 88.6 87 51.7
ATR0753G086 Amborella trichopoda HOM05D007198 ORTHO05D008969 4.0e-16 88.2 73 64.4
Lj2g0004070 Lotus japonicus HOM05D007198 ORTHO05D008969 4.0e-16 88.2 83 55.4
Potri.007G043200 Populus trichocarpa HOM05D007198 ORTHO05D008969 2.0e-15 85.9 87 57.5
BraA08t34210Z Brassica rapa HOM05D007198 ORTHO05D008969 2.6e-15 85.5 67 64.2
Lalb_Chr09g0323151 Lupinus albus HOM05D007198 ORTHO05D008969 3.4e-15 85.1 86 52.3
BolC3t20215H Brassica oleracea HOM05D007198 ORTHO05D008969 1.3e-14 83.2 87 51.7
VMungo1215G1587 Vigna mungo HOM05D007198 ORTHO05D008969 1.3e-14 83.2 86 47.7
Phvul.002G019200 Phaseolus vulgaris HOM05D007198 ORTHO05D008969 2.4e-13 79.0 84 48.8
Sabra07G0038100 Salix brachista HOM05D007198 ORTHO05D008969 5.4e-13 77.8 78 56.4
Os10g0388900 Oryza sativa ssp. japonica HOM05D007198 ORTHO05D008969 1.7e-11 72.8 81 49.4
MBI02_g02990_MAGBIO Magnolia biondii HOM05D007198 ORTHO05D008969 1.5e-10 69.7 61 55.7
Zm00001eb223810 Zea mays HOM05D007198 ORTHO05D008969 3.3e-10 68.6 61 59.0
Mapoly0001s0095 Marchantia polymorpha HOM05D007198 ORTHO05D008969 9.6e-10 67.0 61 52.5
Glyma.11G056400 Glycine max HOM05D007198 ORTHO05D008969 1.3e-09 66.6 49 61.2
Pp3c12_24960 Physcomitrium patens HOM05D007198 ORTHO05D008969 6.2e-09 64.3 58 48.3
Oeu024300.1 Olea europaea HOM05D007198 ORTHO05D008969 8.1e-09 63.9 49 67.3
RcHm_v2.0_Chr3g0472951 Rosa chinensis HOM05D007198 ORTHO05D008969 3.1e-08 62.0 47 59.6
Psat2g167000 Pisum sativum HOM05D007198 ORTHO05D008969 4.0e-08 61.6 51 56.9
MD07G1022300 Malus domestica HOM05D007198 ORTHO05D008969 1.2e-07 60.1 47 63.8
SMO146G0205 Selaginella moellendorffii HOM05D007198 ORTHO05D008969 1.2e-07 60.1 59 47.5


User provided reference genes

Program Settings