Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17886 Vaccinium macrocarpon HOM05D006001 ORTHO05D006714 2.7e-115 418.7 212 100.0
Rhsim07G0212300 Rhododendron simsii HOM05D006001 ORTHO05D006714 2.0e-25 120.2 395 30.9
CSS0018086 Camellia sinensis var. sinensis HOM05D006001 ORTHO05D006714 7.7e-14 81.6 102 47.1
Actinidia19626 Actinidia chinensis HOM05D006001 ORTHO05D006714 2.3e-13 80.1 61 70.5
Thecc.08G071800 Theobroma cacao HOM05D006001 ORTHO05D006714 1.2e-11 74.3 61 62.3
Sed0021655 Sechium edule HOM05D006001 ORTHO05D006714 3.6e-11 72.8 194 32.0
COL.COLO4_35255 Corchorus olitorius HOM05D006001 ORTHO05D006714 1.4e-10 70.9 99 45.5
GSVIVG01009188001 Vitis vinifera HOM05D006001 ORTHO05D006714 3.0e-10 69.7 61 60.7
Haze_22467 Corylus avellana HOM05D006001 ORTHO05D006714 4.0e-10 69.3 100 45.0
Haze_22468 Corylus avellana HOM05D006001 ORTHO05D006714 3.4e-09 66.2 98 45.9
arahy.Tifrunner.gnm1.ann1.5459VI Arachis hypogaea HOM05D006001 ORTHO05D006714 4.4e-09 65.9 61 54.1
arahy.Tifrunner.gnm1.ann1.X0SJ4P Arachis hypogaea HOM05D006001 ORTHO05D006714 4.4e-09 65.9 61 54.1
Dinv42605 Davidia involucrata HOM05D006001 ORTHO05D006714 7.5e-09 65.1 61 63.9
QL09p017955 Quercus lobata HOM05D006001 ORTHO05D006714 1.3e-08 64.3 100 43.0
DCAR_023481 Daucus carota HOM05D006001 ORTHO05D006714 1.7e-08 63.9 61 55.7
ClCG09G016810 Citrullus lanatus HOM05D006001 ORTHO05D006714 2.2e-08 63.5 61 55.7
CsaV3_2G036230 Cucumis sativus L. HOM05D006001 ORTHO05D006714 2.2e-08 63.5 61 57.4
Duzib106G1137 Durio zibethinus HOM05D006001 ORTHO05D006714 2.2e-08 63.5 119 40.3
MELO3C008828.2 Cucumis melo HOM05D006001 ORTHO05D006714 2.9e-08 63.2 61 57.4
MELO3C021835.2 Cucumis melo HOM05D006001 ORTHO05D006714 3.7e-08 62.8 61 55.7
Prupe.1G533200 Prunus persica HOM05D006001 ORTHO05D006714 8.3e-08 61.6 110 39.1
Cfa013804 Carpinus fangiana HOM05D006001 ORTHO05D006714 1.4e-07 60.8 97 42.3
Gohir.A05G320600 Gossypium hirsutum HOM05D006001 ORTHO05D006714 1.4e-07 60.8 61 52.5
TAR381G0479 Trochodendron aralioides HOM05D006001 ORTHO05D006714 1.4e-07 60.8 105 43.8
MBI16_g12475_MAGBIO Magnolia biondii HOM05D006001 ORTHO05D006714 1.8e-07 60.5 61 54.1
QL12p023212 Quercus lobata HOM05D006001 ORTHO05D006714 1.8e-07 60.5 97 40.2
Gohir.D05G322800 Gossypium hirsutum HOM05D006001 ORTHO05D006714 2.4e-07 60.1 61 50.8
Gorai.009G346500 Gossypium raimondii HOM05D006001 ORTHO05D006714 2.4e-07 60.1 61 50.8
Manes.18G058066 Manihot esculenta HOM05D006001 ORTHO05D006714 2.4e-07 60.1 61 57.4
Duzib128G1071 Durio zibethinus HOM05D006001 ORTHO05D006714 4.1e-07 59.3 61 54.1
Eucgr.H00032 Eucalyptus grandis HOM05D006001 ORTHO05D006714 5.4e-07 58.9 98 37.8
Eucgr.L02666 Eucalyptus grandis HOM05D006001 ORTHO05D006714 7.0e-07 58.5 98 37.8
LjContig00408g0013719 Lotus japonicus HOM05D006001 ORTHO05D006714 9.2e-07 58.2 61 52.5
Lj4A738G22 Lonicera japonica HOM05D006001 ORTHO05D006714 1.2e-06 57.8 62 56.5
Oeu034401.1 Olea europaea HOM05D006001 ORTHO05D006714 1.2e-06 57.8 62 58.1
Nn6g34170 Nelumbo nucifera HOM05D006001 ORTHO05D006714 1.6e-06 57.4 61 50.8
CiPaw.03G148200 Carya illinoinensis HOM05D006001 ORTHO05D006714 2.7e-06 56.6 100 40.0
DCAR_002596 Daucus carota HOM05D006001 ORTHO05D006714 2.7e-06 56.6 62 50.0
Glyma.14G182400 Glycine max HOM05D006001 ORTHO05D006714 4.6e-06 55.8 98 37.8
Potri.005G153300 Populus trichocarpa HOM05D006001 ORTHO05D006714 4.6e-06 55.8 93 44.1
PGR042G0630 Punica granatum HOM05D006001 ORTHO05D006714 4.6e-06 55.8 62 50.0


User provided reference genes

Program Settings