Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 2.0e-59 232.3 120 100.0
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 1.6e-40 169.5 120 80.0
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 6.3e-29 131.0 109 67.9
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 3.1e-28 128.6 122 64.8
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 9.1e-28 127.1 131 58.8
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 1.6e-27 126.3 130 60.8
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 2.0e-27 125.9 120 63.3
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 3.8e-26 121.7 95 66.3
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 3.8e-26 121.7 95 66.3
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 1.5e-25 119.8 79 77.2
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 1.9e-25 119.4 112 63.4
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 4.2e-25 118.2 125 60.0
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 4.2e-25 118.2 81 77.8
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 1.2e-24 116.7 114 61.4
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 1.6e-24 116.3 82 73.2
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 2.1e-24 115.9 92 68.5
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 4.7e-24 114.8 79 74.7
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 6.1e-24 114.4 79 70.9
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 8.0e-24 114.0 73 74.0
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 8.0e-24 114.0 82 70.7
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 8.0e-24 114.0 113 62.8
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 8.0e-24 114.0 115 64.3
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 8.0e-24 114.0 79 70.9
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 8.0e-24 114.0 96 65.6
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 8.0e-24 114.0 114 61.4
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 1.0e-23 113.6 79 75.9
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 1.0e-23 113.6 111 59.5
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 1.0e-23 113.6 80 72.5
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 1.8e-23 112.8 79 70.9
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 2.3e-23 112.5 79 70.9
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 2.3e-23 112.5 114 57.0
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.3e-23 112.5 114 57.0
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 4.0e-23 111.7 95 63.2
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 4.0e-23 111.7 114 57.0
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 4.0e-23 111.7 109 60.6
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 5.2e-23 111.3 98 62.2
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 6.7e-23 110.9 94 62.8
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 8.8e-23 110.5 80 71.2
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 8.8e-23 110.5 91 63.7
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 8.8e-23 110.5 114 56.1
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 8.8e-23 110.5 94 63.8
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.2e-22 110.2 115 60.9
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 2.0e-22 109.4 123 55.3
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 2.0e-22 109.4 81 70.4
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 5.7e-22 107.8 82 67.1
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 5.7e-22 107.8 129 51.2
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 9.7e-22 107.1 113 54.0
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 9.7e-22 107.1 123 51.2
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 9.7e-22 107.1 100 60.0
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 1.7e-21 106.3 89 66.3
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 1.7e-21 106.3 81 70.4
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 2.2e-21 105.9 95 62.1
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 2.8e-21 105.5 79 68.4
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 2.8e-21 105.5 79 68.4
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 2.8e-21 105.5 79 68.4
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 3.7e-21 105.1 79 68.4
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 4.8e-21 104.8 74 71.6
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 4.8e-21 104.8 118 53.4
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 6.3e-21 104.4 79 68.4
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 6.3e-21 104.4 79 68.4
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 6.3e-21 104.4 74 71.6
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 6.3e-21 104.4 88 63.6
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 8.3e-21 104.0 86 66.3
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 8.3e-21 104.0 86 66.3
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 8.3e-21 104.0 86 66.3
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 1.1e-20 103.6 93 62.4
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 1.1e-20 103.6 95 62.1
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 1.8e-20 102.8 75 69.3
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 1.8e-20 102.8 92 60.9
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 2.4e-20 102.4 80 62.5
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 2.4e-20 102.4 121 56.2
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 2.4e-20 102.4 68 79.4
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 3.1e-20 102.1 87 63.2
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 4.1e-20 101.7 83 65.1
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 4.1e-20 101.7 72 73.6
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 4.1e-20 101.7 80 66.2
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 7.0e-20 100.9 98 59.2
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 7.0e-20 100.9 123 49.6
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 9.1e-20 100.5 79 65.8
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 9.1e-20 100.5 129 45.7
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 9.1e-20 100.5 108 59.3
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 1.2e-19 100.1 91 60.4
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 1.6e-19 99.8 79 65.8
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 1.6e-19 99.8 79 64.6
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 1.6e-19 99.8 94 59.6
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 2.0e-19 99.4 86 65.1
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 2.0e-19 99.4 80 66.2
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 2.0e-19 99.4 87 59.8
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 3.5e-19 98.6 80 62.5
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 4.5e-19 98.2 83 65.1
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 5.9e-19 97.8 86 64.0
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 1.0e-18 97.1 120 50.0
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 2.2e-18 95.9 93 57.0
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 2.2e-18 95.9 123 48.0
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 5.0e-18 94.7 78 60.3
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 8.5e-18 94.0 82 63.4
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 1.5e-17 93.2 63 74.6
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 1.5e-17 93.2 63 74.6
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 1.9e-17 92.8 81 61.7
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 4.2e-17 91.7 79 64.6
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 5.5e-17 91.3 111 53.2
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 7.2e-17 90.9 73 57.5
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 7.2e-17 90.9 90 57.8
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 2.7e-16 89.0 113 51.3
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 2.7e-16 89.0 60 73.3
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 1.0e-15 87.0 94 55.3
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 3.0e-15 85.5 72 65.3
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 5.2e-15 84.7 119 44.5
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 1.2e-14 83.6 102 51.0
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 1.2e-14 83.6 77 49.4
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 3.4e-14 82.0 183 35.5
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 5.7e-14 81.3 70 57.1
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 5.9e-11 71.2 59 69.5
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 7.7e-11 70.9 52 69.2
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 2.3e-10 69.3 64 51.6
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 3.3e-09 65.5 47 57.4
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 8.0e-08 60.8 66 53.0


User provided reference genes

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