Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17825 Vaccinium macrocarpon HOM05D009163 ORTHO05D010445 1.4e-107 393.7 312 100.0
Actinidia19192 Actinidia chinensis HOM05D009163 ORTHO05D010445 3.0e-30 136.7 362 43.9
Rhsim08G0118300 Rhododendron simsii HOM05D009163 ORTHO05D010445 8.7e-30 135.2 342 58.8
RhsimUnG0100100 Rhododendron simsii HOM05D009163 ORTHO05D010445 8.7e-30 135.2 342 58.8
CiPaw.11G175700 Carya illinoinensis HOM05D009163 ORTHO05D010445 5.5e-24 115.9 313 51.8
Dinv13520 Davidia involucrata HOM05D009163 ORTHO05D010445 5.5e-24 115.9 192 42.2
CiPaw.01G040400 Carya illinoinensis HOM05D009163 ORTHO05D010445 9.6e-21 105.1 313 52.4
ClCG07G008530 Citrullus lanatus HOM05D015520 ORTHO05D010445 1.9e-16 90.9 119 43.7
Nitab4.5_0000344g0220 Nicotiana tabacum HOM05D012291 ORTHO05D010445 3.2e-16 90.1 205 34.1
MELO3C016387.2 Cucumis melo HOM05D015520 ORTHO05D010445 7.9e-15 85.5 122 44.3
GSVIVG01018946001 Vitis vinifera HOM05D009163 ORTHO05D010445 3.3e-13 80.1 116 42.2
CSS0029219 Camellia sinensis var. sinensis HOM05D009163 ORTHO05D010445 1.6e-12 77.8 182 42.9
CsaV3_4G005610 Cucumis sativus L. HOM05D015520 ORTHO05D010445 1.6e-12 77.8 184 40.8
QL06p046412 Quercus lobata HOM05D009163 ORTHO05D010445 1.6e-12 77.8 135 35.6
Oeu042269.2 Olea europaea HOM05D009163 ORTHO05D010445 3.7e-12 76.6 130 38.5
Potri.007G024000 Populus trichocarpa HOM05D009163 ORTHO05D010445 4.1e-11 73.2 112 41.1
Sabra05G0100500 Salix brachista HOM05D009163 ORTHO05D010445 5.3e-11 72.8 112 42.9
Sed0013344 Sechium edule HOM05D015520 ORTHO05D010445 5.3e-11 72.8 124 41.1
Migut.H00982 Erythranthe guttata HOM05D009163 ORTHO05D010445 1.5e-10 71.2 102 42.2
Glyma.11G068900 Glycine max HOM05D013452 ORTHO05D013216 3.4e-10 70.1 315 33.3
CSS0010032 Camellia sinensis var. sinensis HOM05D009163 ORTHO05D010445 4.5e-10 69.7 122 36.9
Prupe.7G155800 Prunus persica HOM05D028013 ORTHO05D010445 5.9e-10 69.3 139 34.5
Potri.005G122400 Populus trichocarpa HOM05D009163 ORTHO05D010445 6.5e-09 65.9 96 40.6
TWI09G1297 Tripterygium wilfordii HOM05D009163 ORTHO05D010445 8.5e-09 65.5 96 41.7
Prupe.I002400 Prunus persica HOM05D028013 ORTHO05D010445 1.4e-08 64.7 83 43.4
SalBow1G0010 Salvia bowleyana HOM05D009163 ORTHO05D010445 4.2e-08 63.2 65 47.7
Aqoxy6G01129 Aquilegia oxysepala HOM05D009163 ORTHO05D010445 7.2e-08 62.4 133 34.6
PSO541G2773 Papaver somniferum HOM05D009163 ORTHO05D010445 7.2e-08 62.4 95 43.2
PSO675G5326 Papaver somniferum HOM05D009163 ORTHO05D010445 7.2e-08 62.4 95 43.2
Duzib187G1372 Durio zibethinus HOM05D019098 ORTHO05D025280 9.3e-08 62.0 45 75.6
Thecc.01G034000 Theobroma cacao HOM05D019098 ORTHO05D025280 1.2e-07 61.6 45 73.3
MELO3C016385.2 Cucumis melo HOM05D015520 ORTHO05D010445 2.7e-07 60.5 104 39.4
Lsat_1_v5_gn_4_152361 Lactuca sativa HOM05D038519 ORTHO05D010445 3.6e-07 60.1 111 31.5
Nitab4.5_0001960g0040 Nicotiana tabacum HOM05D012291 ORTHO05D010445 3.6e-07 60.1 133 33.8
Cc07_g09620 Coffea canephora HOM05D009163 ORTHO05D010445 4.6e-07 59.7 40 60.0
Manes.01G135700 Manihot esculenta HOM05D009163 ORTHO05D010445 4.6e-07 59.7 187 31.6
MD02G1146200 Malus domestica HOM05D028013 ORTHO05D010445 6.1e-07 59.3 178 28.7
MSTRG.15269 Avicennia marina HOM05D009163 ORTHO05D010445 1.0e-06 58.5 98 34.7
THA.LOC104807843 Tarenaya hassleriana HOM05D009606 ORTHO05D011759 1.0e-06 58.5 315 34.0
Eucgr.I02433 Eucalyptus grandis HOM05D009163 ORTHO05D013216 3.0e-06 57.0 45 64.4
Oeu033653.1 Olea europaea HOM05D009163 ORTHO05D010445 3.0e-06 57.0 92 41.3
Duzib147G1474 Durio zibethinus HOM05D019098 ORTHO05D019096 3.9e-06 56.6 285 39.3
SGA_v2.0_scaffold54G19542 Striga asiatica HOM05D009163 ORTHO05D010445 6.7e-06 55.8 48 52.1


User provided reference genes

Program Settings