Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17794 Vaccinium macrocarpon HOM05D000372 ORTHO05D051534 4.7e-117 424.5 206 100.0
Actinidia23121 Actinidia chinensis HOM05D000372 ORTHO05D003436 2.4e-12 76.6 46 84.8
Glyma.U003300 Glycine max HOM05D000372 ORTHO05D003436 2.4e-12 76.6 46 82.6
COL.COLO4_19011 Corchorus olitorius HOM05D000372 ORTHO05D003436 3.2e-12 76.3 46 82.6
Haze_18342 Corylus avellana HOM05D000372 ORTHO05D003436 4.1e-12 75.9 52 73.1
Prupe.1G400900 Prunus persica HOM05D000372 ORTHO05D003436 4.1e-12 75.9 46 82.6
Dinv06101 Davidia involucrata HOM05D000372 ORTHO05D003436 5.4e-12 75.5 46 82.6
Rhsim07G0169300 Rhododendron simsii HOM05D000372 ORTHO05D003436 5.4e-12 75.5 46 84.8
CAN.G808.7 Capsicum annuum HOM05D000372 ORTHO05D003436 7.0e-12 75.1 46 78.3
Ca_15798_v3 Cicer arietinum L. HOM05D000372 ORTHO05D003436 7.0e-12 75.1 46 80.4
Duzib187G1714 Durio zibethinus HOM05D000372 ORTHO05D003436 7.0e-12 75.1 46 80.4
Phvul.009G084900 Phaseolus vulgaris HOM05D000372 ORTHO05D003436 7.0e-12 75.1 46 80.4
Psat5g033760 Pisum sativum HOM05D000372 ORTHO05D003436 7.0e-12 75.1 46 80.4
Solyc08g068960.3 Solanum lycopersicum HOM05D000372 ORTHO05D003436 7.0e-12 75.1 46 78.3
Sopen08g022620 Solanum pennellii HOM05D000372 ORTHO05D003436 7.0e-12 75.1 46 78.3
PGSC0003DMG400029542 Solanum tuberosum HOM05D000372 ORTHO05D003436 7.0e-12 75.1 46 78.3
TPR.G21426 Trifolium pratense HOM05D000372 ORTHO05D003436 7.0e-12 75.1 46 80.4
VMungo1309G2648 Vigna mungo HOM05D000372 ORTHO05D003436 7.0e-12 75.1 46 80.4
CiPaw.16G070900 Carya illinoinensis HOM05D000372 ORTHO05D003436 9.2e-12 74.7 46 78.3
SalBow8G1746 Salvia bowleyana HOM05D000372 ORTHO05D003436 9.2e-12 74.7 46 78.3
SalBow8G4869 Salvia bowleyana HOM05D000372 ORTHO05D003436 9.2e-12 74.7 46 78.3
Cpa.g.sc23.44 Carica papaya HOM05D000372 ORTHO05D003436 1.2e-11 74.3 46 80.4
Cfa017850 Carpinus fangiana HOM05D000372 ORTHO05D003436 1.2e-11 74.3 46 80.4
MD15G1046500 Malus domestica HOM05D000372 ORTHO05D003436 1.2e-11 74.3 46 80.4
Medtr3g105590 Medicago truncatula HOM05D000372 ORTHO05D003436 1.2e-11 74.3 46 78.3
Nitab4.5_0006884g0010 Nicotiana tabacum HOM05D000372 ORTHO05D003436 1.2e-11 74.3 46 78.3
QL02p017417 Quercus lobata HOM05D000372 ORTHO05D003436 1.2e-11 74.3 46 80.4
TAR383G1081 Trochodendron aralioides HOM05D000372 ORTHO05D003436 1.2e-11 74.3 46 80.4
GSVIVG01033164001 Vitis vinifera HOM05D000372 ORTHO05D003436 1.2e-11 74.3 46 80.4
arahy.Tifrunner.gnm1.ann1.2363PW Arachis hypogaea HOM05D000372 ORTHO05D003436 1.6e-11 73.9 46 78.3
arahy.Tifrunner.gnm1.ann1.IKLL4G Arachis hypogaea HOM05D000372 ORTHO05D003436 1.6e-11 73.9 46 78.3
Dinv19797 Davidia involucrata HOM05D000372 ORTHO05D003436 1.6e-11 73.9 46 80.4
Glyma.04G058400 Glycine max HOM05D000372 ORTHO05D003436 1.6e-11 73.9 46 80.4
Cc08_g06200 Coffea canephora HOM05D000372 ORTHO05D003436 2.0e-11 73.6 46 78.3
Migut.E00913 Erythranthe guttata HOM05D000372 ORTHO05D003436 2.0e-11 73.6 59 64.4
Eucgr.C04019 Eucalyptus grandis HOM05D000372 ORTHO05D003436 2.0e-11 73.6 46 78.3
Lalb_Chr14g0375411 Lupinus albus HOM05D000372 ORTHO05D003436 2.0e-11 73.6 46 76.1
Medtr1g013360 Medicago truncatula HOM05D000372 ORTHO05D003436 2.0e-11 73.6 46 76.1
Oeu008769.1 Olea europaea HOM05D000372 ORTHO05D003436 2.0e-11 73.6 46 78.3
Thecc.09G009700 Theobroma cacao HOM05D000372 ORTHO05D003436 2.0e-11 73.6 46 78.3
TWI32G0796 Tripterygium wilfordii HOM05D000372 ORTHO05D003436 2.0e-11 73.6 46 78.3
TWI63G0489 Tripterygium wilfordii HOM05D000372 ORTHO05D003436 2.0e-11 73.6 46 78.3
Hma1.2p1_0102F.1_g049740 Hydrangea macrophylla HOM05D000372 ORTHO05D003436 2.7e-11 73.2 46 78.3
Lj1g0015187 Lotus japonicus HOM05D000372 ORTHO05D003436 2.7e-11 73.2 46 78.3
Nitab4.5_0000502g0160 Nicotiana tabacum HOM05D000372 ORTHO05D003436 2.7e-11 73.2 46 76.1
Oeu023248.1 Olea europaea HOM05D000372 ORTHO05D003436 2.7e-11 73.2 46 80.4
CANSAT25G2139 Cannabis sativa HOM05D000372 ORTHO05D003436 3.5e-11 72.8 46 78.3
SalBow4G3322 Salvia bowleyana HOM05D000372 ORTHO05D003436 3.5e-11 72.8 46 80.4
DCAR_003039 Daucus carota HOM05D000372 ORTHO05D003436 4.6e-11 72.4 46 76.1
Duzib168G1416 Durio zibethinus HOM05D000372 ORTHO05D003436 4.6e-11 72.4 46 78.3
Migut.E01430 Erythranthe guttata HOM05D000372 ORTHO05D003436 4.6e-11 72.4 46 76.1
Glyma.17G220800 Glycine max HOM05D000372 ORTHO05D003436 4.6e-11 72.4 46 78.3
Gohir.A05G063000 Gossypium hirsutum HOM05D000372 ORTHO05D003436 4.6e-11 72.4 46 78.3
Gohir.D05G065500 Gossypium hirsutum HOM05D000372 ORTHO05D003436 4.6e-11 72.4 46 78.3
Gorai.009G066300 Gossypium raimondii HOM05D000372 ORTHO05D003436 4.6e-11 72.4 46 78.3
Manes.16G133700 Manihot esculenta HOM05D000372 ORTHO05D003436 6.0e-11 72.0 46 76.1
Potri.006G270500 Populus trichocarpa HOM05D000372 ORTHO05D003436 6.0e-11 72.0 46 78.3
Potri.018G011400 Populus trichocarpa HOM05D000372 ORTHO05D003436 6.0e-11 72.0 46 78.3
RcHm_v2.0_Chr6g0304671 Rosa chinensis HOM05D000372 ORTHO05D003436 6.0e-11 72.0 46 78.3
Sabra18G0012300 Salix brachista HOM05D000372 ORTHO05D003436 6.0e-11 72.0 46 78.3
Hund25587 Selenicereus undatus HOM05D000372 ORTHO05D003436 6.0e-11 72.0 45 77.8
Sc23g0006190 Simmondsia chinensis HOM05D000372 ORTHO05D003436 6.0e-11 72.0 46 73.9
MD08G1047400 Malus domestica HOM05D000372 ORTHO05D003436 7.8e-11 71.6 46 76.1
Peaxi162Scf00288g01010 Petunia axillaris HOM05D000372 ORTHO05D003436 7.8e-11 71.6 46 76.1
Nn8g40299 Nelumbo nucifera HOM05D000372 ORTHO05D003436 1.0e-10 71.2 46 78.3
Duzib150G0268 Durio zibethinus HOM05D000372 ORTHO05D003436 1.3e-10 70.9 46 76.1
Gohir.A05G062700 Gossypium hirsutum HOM05D000372 ORTHO05D003436 1.3e-10 70.9 46 76.1
Gohir.D05G065200 Gossypium hirsutum HOM05D000372 ORTHO05D003436 1.3e-10 70.9 46 76.1
Gorai.009G066000 Gossypium raimondii HOM05D000372 ORTHO05D003436 1.3e-10 70.9 46 76.1
Lj7C743T9 Lonicera japonica HOM05D000372 ORTHO05D003436 1.3e-10 70.9 46 76.1
Phvul.001G043600 Phaseolus vulgaris HOM05D000372 ORTHO05D003436 1.3e-10 70.9 46 73.9
Sc09g0010830 Simmondsia chinensis HOM05D000372 ORTHO05D003436 1.3e-10 70.9 46 78.3
VMungo0647G1491 Vigna mungo HOM05D000372 ORTHO05D003436 1.3e-10 70.9 46 73.9
CSS0030725 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 1.7e-10 70.5 46 76.1
CSS0031908 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 1.7e-10 70.5 46 76.1
Ca_13081_v3 Cicer arietinum L. HOM05D000372 ORTHO05D003436 1.7e-10 70.5 46 73.9
FvH4_2g37120 Fragaria vesca HOM05D000372 ORTHO05D003436 1.7e-10 70.5 46 71.7
FAN15G3394 Fragaria x ananassa HOM05D000372 ORTHO05D003436 1.7e-10 70.5 46 71.7
MBI14_g24282_MAGBIO Magnolia biondii HOM05D000372 ORTHO05D003436 1.7e-10 70.5 46 78.3
CSS0020280 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 2.3e-10 70.1 47 76.6
AUR62037701 Chenopodium quinoa HOM05D000372 ORTHO05D003436 2.3e-10 70.1 46 71.7
Glyma.14G105400 Glycine max HOM05D000372 ORTHO05D003436 2.3e-10 70.1 46 73.9
PGR044G0422 Punica granatum HOM05D000372 ORTHO05D003436 2.3e-10 70.1 46 71.7
TPR.G38882 Trifolium pratense HOM05D000372 ORTHO05D003436 2.3e-10 70.1 46 71.7
TPR.G38926 Trifolium pratense HOM05D000372 ORTHO05D003436 2.3e-10 70.1 46 71.7
EL10Ac2g02429 Beta vulgaris HOM05D000372 ORTHO05D003436 3.0e-10 69.7 46 71.7
CSS0018460 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 3.0e-10 69.7 46 76.1
AUR62020299 Chenopodium quinoa HOM05D000372 ORTHO05D003436 3.0e-10 69.7 46 71.7
ECA240G4325 Erigeron canadensis HOM05D000372 ORTHO05D003436 3.0e-10 69.7 46 71.7
FAN27G2462 Fragaria x ananassa HOM05D000372 ORTHO05D003436 3.0e-10 69.7 46 69.6
Aqoxy7G03181 Aquilegia oxysepala HOM05D000372 ORTHO05D003436 3.9e-10 69.3 46 76.1
arahy.Tifrunner.gnm1.ann1.54Q5ZL Arachis hypogaea HOM05D000372 ORTHO05D003436 3.9e-10 69.3 46 71.7
arahy.Tifrunner.gnm1.ann1.672M4G Arachis hypogaea HOM05D000372 ORTHO05D003436 3.9e-10 69.3 46 71.7
Migut.A00416 Erythranthe guttata HOM05D000372 ORTHO05D003436 3.9e-10 69.3 46 76.1
FAN20G1896 Fragaria x ananassa HOM05D000372 ORTHO05D003436 3.9e-10 69.3 46 71.7
HanXRQChr03g0082521 Helianthus annuus HOM05D000372 ORTHO05D003436 3.9e-10 69.3 46 69.6
Psat6g023640 Pisum sativum HOM05D000372 ORTHO05D003436 3.9e-10 69.3 46 71.7
Ah.10g025030 Amaranthus hybridus HOM05D000372 ORTHO05D003436 5.0e-10 68.9 46 71.7
CSS0002412 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 5.0e-10 68.9 46 73.9
Sabra06G0210300 Salix brachista HOM05D000372 ORTHO05D003436 5.0e-10 68.9 46 73.9
ECA246G0477 Erigeron canadensis HOM05D000372 ORTHO05D003436 6.6e-10 68.6 46 71.7
Lsat_1_v5_gn_3_25440 Lactuca sativa HOM05D000372 ORTHO05D003436 6.6e-10 68.6 46 69.6
Psat7g070360 Pisum sativum HOM05D000372 ORTHO05D003436 6.6e-10 68.6 46 69.6
Psat7g193560 Pisum sativum HOM05D000372 ORTHO05D003436 6.6e-10 68.6 46 69.6
AL6G21200 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 8.6e-10 68.2 46 71.7
AL6G21260 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 8.6e-10 68.2 46 71.7
Psat1g043080 Pisum sativum HOM05D000372 ORTHO05D003436 8.6e-10 68.2 46 67.4
ATR0580G441 Amborella trichopoda HOM05D000372 ORTHO05D003436 1.1e-09 67.8 46 71.7
CSS0035630 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 1.1e-09 67.8 46 76.1
HanXRQChr06g0174111 Helianthus annuus HOM05D000372 ORTHO05D003436 1.1e-09 67.8 46 69.6
Manes.03G005600 Manihot esculenta HOM05D000372 ORTHO05D003436 1.1e-09 67.8 46 71.7
Oeu008770.2 Olea europaea HOM05D000372 ORTHO05D003436 1.5e-09 67.4 48 66.7
AT5G10720 Arabidopsis thaliana HOM05D000372 ORTHO05D003436 1.9e-09 67.0 46 69.6
Ciclev10010162m.g Citrus clementina HOM05D000372 ORTHO05D003436 1.9e-09 67.0 46 71.7
Carub.0006s0919 Capsella rubella HOM05D000372 ORTHO05D003436 2.5e-09 66.6 46 69.6
CARHR202600 Cardamine hirsuta HOM05D000372 ORTHO05D003436 2.5e-09 66.6 46 69.6
ClCG05G016010 Citrullus lanatus HOM05D000372 ORTHO05D003436 2.5e-09 66.6 46 69.6
MELO3C016937.2 Cucumis melo HOM05D000372 ORTHO05D003436 2.5e-09 66.6 46 69.6
CsaV3_4G036290 Cucumis sativus L. HOM05D000372 ORTHO05D003436 2.5e-09 66.6 46 69.6
Thhalv10012606m.g Eutrema salsugineum HOM05D000372 ORTHO05D003436 3.3e-09 66.2 46 69.6
Sp2g22540 Schrenkiella parvula HOM05D000372 ORTHO05D003436 3.3e-09 66.2 46 69.6
PSO063G4267 Papaver somniferum HOM05D000372 ORTHO05D003436 4.3e-09 65.9 46 71.7
PSO782G1259 Papaver somniferum HOM05D000372 ORTHO05D003436 4.3e-09 65.9 46 71.7
THA.LOC104803327 Tarenaya hassleriana HOM05D000372 ORTHO05D003436 4.3e-09 65.9 46 67.4
THA.LOC104819942 Tarenaya hassleriana HOM05D000372 ORTHO05D003436 5.6e-09 65.5 46 69.6
Aa31sc15G100 Aethionema arabicum HOM05D000372 ORTHO05D003436 7.3e-09 65.1 49 61.2
Lj5g0022261 Lotus japonicus HOM05D000372 ORTHO05D003436 7.3e-09 65.1 46 67.4
Sed0000787 Sechium edule HOM05D000372 ORTHO05D003436 7.3e-09 65.1 46 67.4
Aa31LG3G16390 Aethionema arabicum HOM05D000372 ORTHO05D003436 9.5e-09 64.7 46 67.4
BcaB01g06275 Brassica carinata HOM05D000372 ORTHO05D003436 9.5e-09 64.7 46 67.4
Lsat_1_v5_gn_3_116581 Lactuca sativa HOM05D000372 ORTHO05D003436 9.5e-09 64.7 46 69.6
Sp2g06120 Schrenkiella parvula HOM05D000372 ORTHO05D003436 9.5e-09 64.7 46 67.4
Sp6g32740 Schrenkiella parvula HOM05D000372 ORTHO05D003436 9.5e-09 64.7 46 67.4
CARHR155340 Cardamine hirsuta HOM05D000372 ORTHO05D003436 1.2e-08 64.3 46 65.2
A03p04730 Brassica napus HOM05D000372 ORTHO05D003436 2.1e-08 63.5 46 65.2
C03p05430 Brassica napus HOM05D000372 ORTHO05D003436 2.1e-08 63.5 46 65.2
BolC3t13054H Brassica oleracea HOM05D000372 ORTHO05D003436 2.1e-08 63.5 46 65.2
BraA03t09813Z Brassica rapa HOM05D000372 ORTHO05D003436 2.1e-08 63.5 46 65.2
Sed0022125 Sechium edule HOM05D000372 ORTHO05D003436 2.1e-08 63.5 46 67.4
BcaB08g37314 Brassica carinata HOM05D000372 ORTHO05D003436 2.8e-08 63.2 46 67.4
BcaC03g13326 Brassica carinata HOM05D000372 ORTHO05D003436 2.8e-08 63.2 46 67.4
BcaC04g19290 Brassica carinata HOM05D000372 ORTHO05D003436 2.8e-08 63.2 46 67.4
A02p00610 Brassica napus HOM05D000372 ORTHO05D003436 2.8e-08 63.2 46 67.4
A10p26890 Brassica napus HOM05D000372 ORTHO05D003436 2.8e-08 63.2 46 67.4
C02p04600 Brassica napus HOM05D000372 ORTHO05D003436 2.8e-08 63.2 46 67.4
C09p66090 Brassica napus HOM05D000372 ORTHO05D003436 2.8e-08 63.2 46 67.4
BolC2t06420H Brassica oleracea HOM05D000372 ORTHO05D003436 2.8e-08 63.2 46 67.4
BolC9t59429H Brassica oleracea HOM05D000372 ORTHO05D003436 2.8e-08 63.2 46 67.4
BraA02t05044Z Brassica rapa HOM05D000372 ORTHO05D003436 2.8e-08 63.2 46 67.4
BraA10t44741Z Brassica rapa HOM05D000372 ORTHO05D003436 2.8e-08 63.2 46 67.4
HPP92_011627 Vanilla planifolia HOM05D000372 ORTHO05D003436 3.6e-08 62.8 46 67.4
BcaB01g05503 Brassica carinata HOM05D000372 ORTHO05D003436 6.2e-08 62.0 45 64.4
BcaB05g21500 Brassica carinata HOM05D000372 ORTHO05D003436 8.1e-08 61.6 45 66.7
Psat1g043040 Pisum sativum HOM05D000372 ORTHO05D003436 1.4e-07 60.8 41 68.3
vmacro23206 Vaccinium macrocarpon HOM05D000372 ORTHO05D051534 2.3e-07 60.1 48 68.8
Lsat_1_v5_gn_5_62200 Lactuca sativa HOM05D000372 ORTHO05D003436 3.1e-07 59.7 42 69.0
Zm00001eb274910 Zea mays HOM05D000372 ORTHO05D003436 5.2e-07 58.9 46 65.2
Zm00001eb389570 Zea mays HOM05D000372 ORTHO05D003436 1.2e-06 57.8 46 65.2
SEGI_09005 Sequoiadendron giganteum HOM05D000372 ORTHO05D003436 2.0e-06 57.0 43 69.8
Os06g0654300 Oryza sativa ssp. japonica HOM05D000372 ORTHO05D003436 4.4e-06 55.8 46 60.9


User provided reference genes

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