Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17780 Vaccinium macrocarpon HOM05D003616 ORTHO05D004289 3.0e-60 235.0 115 100.0
CSS0013276 Camellia sinensis var. sinensis HOM05D003616 ORTHO05D004289 4.8e-34 147.9 90 80.0
Cpa.g.sc3.395 Carica papaya HOM05D003616 ORTHO05D004289 1.4e-30 136.3 90 71.1
Actinidia28138 Actinidia chinensis HOM05D003616 ORTHO05D004289 3.2e-30 135.2 97 69.1
TAR625G0790 Trochodendron aralioides HOM05D003616 ORTHO05D004289 1.2e-29 133.3 90 70.0
Eucgr.B01000 Eucalyptus grandis HOM05D003616 ORTHO05D004289 1.6e-29 132.9 92 69.6
Duzib084G0113 Durio zibethinus HOM05D003616 ORTHO05D004289 3.5e-29 131.7 90 68.9
Thecc.03G055800 Theobroma cacao HOM05D003616 ORTHO05D004289 4.6e-29 131.3 90 68.9
CsaV3_1G004390 Cucumis sativus L. HOM05D003616 ORTHO05D004289 1.3e-28 129.8 90 66.7
Nn4g24400 Nelumbo nucifera HOM05D003616 ORTHO05D004289 1.3e-28 129.8 90 68.9
PGR083G0078 Punica granatum HOM05D003616 ORTHO05D004289 2.3e-28 129.0 89 70.8
Atru.chr9.1732 Acer truncatum HOM05D003616 ORTHO05D004289 3.9e-28 128.3 90 67.8
ClCG06G014280 Citrullus lanatus HOM05D003616 ORTHO05D004289 5.1e-28 127.9 92 67.4
MELO3C017361.2 Cucumis melo HOM05D003616 ORTHO05D004289 5.1e-28 127.9 90 66.7
Migut.C00863 Erythranthe guttata HOM05D003616 ORTHO05D004289 5.1e-28 127.9 90 68.9
Gohir.A03G092600 Gossypium hirsutum HOM05D003616 ORTHO05D004289 5.1e-28 127.9 90 67.8
Gohir.D02G121200 Gossypium hirsutum HOM05D003616 ORTHO05D004289 5.1e-28 127.9 90 67.8
CiPaw.15G143500 Carya illinoinensis HOM05D003616 ORTHO05D004289 1.5e-27 126.3 90 68.9
Sc10g0009170 Simmondsia chinensis HOM05D003616 ORTHO05D004289 1.5e-27 126.3 91 68.1
TAR629G1297 Trochodendron aralioides HOM05D003616 ORTHO05D004289 1.9e-27 125.9 90 65.6
Gorai.005G133000 Gossypium raimondii HOM05D003616 ORTHO05D004289 3.3e-27 125.2 91 67.0
GSVIVG01008442001 Vitis vinifera HOM05D003616 ORTHO05D004289 3.3e-27 125.2 90 67.8
QL10p029638 Quercus lobata HOM05D003616 ORTHO05D004289 4.3e-27 124.8 90 66.7
Psat1g033600 Pisum sativum HOM05D003616 ORTHO05D004289 5.7e-27 124.4 90 65.6
Sabra15G0037100 Salix brachista HOM05D003616 ORTHO05D004289 7.4e-27 124.0 85 70.6
Haze_18855 Corylus avellana HOM05D003616 ORTHO05D004289 9.6e-27 123.6 92 68.5
TWI60G1662 Tripterygium wilfordii HOM05D003616 ORTHO05D004289 9.6e-27 123.6 91 67.0
Oeu010273.1 Olea europaea HOM05D003616 ORTHO05D004289 1.3e-26 123.2 90 67.8
MSTRG.24236 Avicennia marina HOM05D003616 ORTHO05D004289 1.6e-26 122.9 90 65.6
TPR.G8619 Trifolium pratense HOM05D003616 ORTHO05D004289 1.6e-26 122.9 90 64.4
Dinv39539 Davidia involucrata HOM05D003616 ORTHO05D004289 2.1e-26 122.5 90 64.4
Hma1.2p1_0023F.1_g015660 Hydrangea macrophylla HOM05D003616 ORTHO05D004289 2.1e-26 122.5 97 59.8
Cfa019655 Carpinus fangiana HOM05D003616 ORTHO05D004289 2.8e-26 122.1 92 67.4
Potri.015G038300 Populus trichocarpa HOM05D003616 ORTHO05D004289 2.8e-26 122.1 92 64.1
TWI15G0798 Tripterygium wilfordii HOM05D003616 ORTHO05D004289 2.8e-26 122.1 91 65.9
FAN08G3458 Fragaria x ananassa HOM05D003616 ORTHO05D004289 3.7e-26 121.7 95 62.1
Medtr6g069420 Medicago truncatula HOM05D003616 ORTHO05D004289 3.7e-26 121.7 92 65.2
Ca_25333_v3 Cicer arietinum L. HOM05D003616 ORTHO05D004289 4.8e-26 121.3 90 62.2
Ciclev10008944m.g Citrus clementina HOM05D003616 ORTHO05D004289 4.8e-26 121.3 90 62.2
MBI04_g06229_MAGBIO Magnolia biondii HOM05D003616 ORTHO05D004289 4.8e-26 121.3 90 66.7
Glyma.07G102200 Glycine max HOM05D003616 ORTHO05D004289 6.3e-26 120.9 90 65.6
Lj2g0015525 Lotus japonicus HOM05D003616 ORTHO05D004289 6.3e-26 120.9 90 63.3
SalBow8G4338 Salvia bowleyana HOM05D003616 ORTHO05D004289 6.3e-26 120.9 78 74.4
CSS0016648 Camellia sinensis var. sinensis HOM05D003616 ORTHO05D004289 8.2e-26 120.6 90 60.0
CANSAT80G0515 Cannabis sativa HOM05D003616 ORTHO05D004289 8.2e-26 120.6 90 67.8
Migut.N03175 Erythranthe guttata HOM05D003616 ORTHO05D004289 8.2e-26 120.6 90 65.6
Oeu026133.1 Olea europaea HOM05D003616 ORTHO05D004289 8.2e-26 120.6 90 65.6
Actinidia15440 Actinidia chinensis HOM05D003616 ORTHO05D004289 1.1e-25 120.2 90 62.2
HanXRQChr07g0204451 Helianthus annuus HOM05D003616 ORTHO05D004289 1.4e-25 119.8 98 63.3
Sabra12G0032700 Salix brachista HOM05D003616 ORTHO05D004289 1.8e-25 119.4 93 63.4
Lj4A21T62 Lonicera japonica HOM05D003616 ORTHO05D004289 2.4e-25 119.0 90 60.0
VMungo0464G1067 Vigna mungo HOM05D003616 ORTHO05D004289 2.4e-25 119.0 90 66.7
Lj1g0017366 Lotus japonicus HOM05D003616 ORTHO05D004289 3.1e-25 118.6 90 63.3
RcHm_v2.0_Chr7g0178351 Rosa chinensis HOM05D003616 ORTHO05D004289 3.1e-25 118.6 95 61.1
FAN18G4023 Fragaria x ananassa HOM05D003616 ORTHO05D004289 4.1e-25 118.2 95 61.1
Glyma.09G177000 Glycine max HOM05D003616 ORTHO05D004289 4.1e-25 118.2 90 65.6
PSO541G0876 Papaver somniferum HOM05D003616 ORTHO05D004289 4.1e-25 118.2 91 63.7
PSO675G9362 Papaver somniferum HOM05D003616 ORTHO05D004289 4.1e-25 118.2 91 63.7
unitig_748.g7720 Utricularia gibba HOM05D003616 ORTHO05D004289 4.1e-25 118.2 101 60.4
FAN04G2471 Fragaria x ananassa HOM05D003616 ORTHO05D004289 5.3e-25 117.9 95 61.1
AUR62040567 Chenopodium quinoa HOM05D003616 ORTHO05D004289 6.9e-25 117.5 97 59.8
Glyma.04G023200 Glycine max HOM05D003616 ORTHO05D004289 6.9e-25 117.5 90 62.2
Lsat_1_v5_gn_2_108180 Lactuca sativa HOM05D003616 ORTHO05D004289 6.9e-25 117.5 90 64.4
Atru.chr13.252 Acer truncatum HOM05D003616 ORTHO05D004289 9.0e-25 117.1 90 62.2
Gohir.A05G184900 Gossypium hirsutum HOM05D003616 ORTHO05D004289 1.2e-24 116.7 90 63.3
Manes.14G171500 Manihot esculenta HOM05D003616 ORTHO05D004289 1.2e-24 116.7 90 65.6
Gohir.D05G187700 Gossypium hirsutum HOM05D003616 ORTHO05D004289 1.5e-24 116.3 90 63.3
Gorai.009G193000 Gossypium raimondii HOM05D003616 ORTHO05D004289 1.5e-24 116.3 90 63.3
arahy.Tifrunner.gnm1.ann1.0SP0C0 Arachis hypogaea HOM05D003616 ORTHO05D004289 2.0e-24 115.9 90 63.3
arahy.Tifrunner.gnm1.ann1.YQ88M5 Arachis hypogaea HOM05D003616 ORTHO05D004289 2.0e-24 115.9 90 63.3
Lalb_Chr08g0246201 Lupinus albus HOM05D003616 ORTHO05D004289 2.0e-24 115.9 90 62.2
MD14G1236600 Malus domestica HOM05D003616 ORTHO05D004289 2.0e-24 115.9 90 62.2
PSO170G1220 Papaver somniferum HOM05D003616 ORTHO05D004289 2.0e-24 115.9 91 64.8
DCAR_003546 Daucus carota HOM05D003616 ORTHO05D004289 2.6e-24 115.5 90 61.1
Potri.005G242500 Populus trichocarpa HOM05D003616 ORTHO05D004289 2.6e-24 115.5 90 60.0
Phvul.009G009900 Phaseolus vulgaris HOM05D003616 ORTHO05D004289 3.4e-24 115.2 90 61.1
Sabra05G0187700 Salix brachista HOM05D003616 ORTHO05D004289 3.4e-24 115.2 90 62.2
Sed0005025 Sechium edule HOM05D003616 ORTHO05D004289 3.4e-24 115.2 91 61.5
Sc02g0008690 Simmondsia chinensis HOM05D003616 ORTHO05D004289 3.4e-24 115.2 97 58.8
VMungo1309G2159 Vigna mungo HOM05D003616 ORTHO05D004289 3.4e-24 115.2 90 61.1
AUR62013931 Chenopodium quinoa HOM05D003616 ORTHO05D004289 4.5e-24 114.8 98 57.1
ECA233G1223 Erigeron canadensis HOM05D004899 ORTHO05D006580 4.5e-24 114.8 91 63.7
PSO700G0251 Papaver somniferum HOM05D003616 ORTHO05D004289 4.5e-24 114.8 91 63.7
Phvul.004G150900 Phaseolus vulgaris HOM05D003616 ORTHO05D004289 4.5e-24 114.8 90 63.3
Prupe.1G362400 Prunus persica HOM05D003616 ORTHO05D004289 4.5e-24 114.8 97 60.8
HanXRQChr14g0455291 Helianthus annuus HOM05D003616 ORTHO05D004289 5.9e-24 114.4 90 61.1
Lalb_Chr14g0370571 Lupinus albus HOM05D003616 ORTHO05D004289 5.9e-24 114.4 97 59.8
Potri.012G046600 Populus trichocarpa HOM05D003616 ORTHO05D004289 5.9e-24 114.4 92 62.0
GSVIVG01009954001 Vitis vinifera HOM05D003616 ORTHO05D004289 5.9e-24 114.4 97 57.7
FAN27G0470 Fragaria x ananassa HOM05D003616 ORTHO05D004289 7.6e-24 114.0 90 62.2
Peaxi162Scf00860g00047 Petunia axillaris HOM05D003616 ORTHO05D004289 7.6e-24 114.0 94 58.5
SGA_v2.0_scaffold19G08556 Striga asiatica HOM05D003616 ORTHO05D004289 1.0e-23 113.6 107 56.1
SGA_v2.0_scaffold92G28201 Striga asiatica HOM05D003616 ORTHO05D004289 1.0e-23 113.6 90 63.3
COL.COLO4_26116 Corchorus olitorius HOM05D003616 ORTHO05D004289 1.3e-23 113.2 97 57.7
FvH4_2g38150 Fragaria vesca HOM05D003616 ORTHO05D004289 1.3e-23 113.2 90 62.2
Psat5g012880 Pisum sativum HOM05D003616 ORTHO05D004289 1.3e-23 113.2 90 61.1
Ca_15480_v3 Cicer arietinum L. HOM05D003616 ORTHO05D004289 1.7e-23 112.8 90 60.0
HanXRQChr06g0183781 Helianthus annuus HOM05D003616 ORTHO05D004289 1.7e-23 112.8 90 58.9
Sed0021008 Sechium edule HOM05D003616 ORTHO05D004289 1.7e-23 112.8 90 60.0
arahy.Tifrunner.gnm1.ann1.MX1HG7 Arachis hypogaea HOM05D003616 ORTHO05D004289 2.2e-23 112.5 90 58.9
arahy.Tifrunner.gnm1.ann1.TXJ4LD Arachis hypogaea HOM05D003616 ORTHO05D004289 2.2e-23 112.5 90 58.9
Cfa013983 Carpinus fangiana HOM05D003616 ORTHO05D004289 2.2e-23 112.5 97 57.7
Cc02_g37150 Coffea canephora HOM05D003616 ORTHO05D004289 2.2e-23 112.5 90 61.1
Lj5A158G70 Lonicera japonica HOM05D003616 ORTHO05D004289 2.2e-23 112.5 105 56.2
Sed0022788 Sechium edule HOM05D003616 ORTHO05D004289 2.2e-23 112.5 97 58.8
Hund05170 Selenicereus undatus HOM05D003616 ORTHO05D004289 2.2e-23 112.5 97 58.8
Zm00001eb086680 Zea mays HOM05D003616 ORTHO05D004289 2.2e-23 112.5 90 62.2
Manes.18G011100 Manihot esculenta HOM05D003616 ORTHO05D004289 2.9e-23 112.1 90 60.0
Os04g0244400 Oryza sativa ssp. japonica HOM05D003616 ORTHO05D004289 2.9e-23 112.1 90 61.1
ECA238G4543 Erigeron canadensis HOM05D003616 ORTHO05D004289 3.8e-23 111.7 90 58.9
RcHm_v2.0_Chr6g0303331 Rosa chinensis HOM05D003616 ORTHO05D004289 3.8e-23 111.7 90 62.2
FAN15G3669 Fragaria x ananassa HOM05D003616 ORTHO05D004289 5.0e-23 111.3 90 60.0
Lsat_1_v5_gn_2_9140 Lactuca sativa HOM05D003616 ORTHO05D004289 5.0e-23 111.3 90 57.8
SEGI_35058 Sequoiadendron giganteum HOM05D003616 ORTHO05D004289 5.0e-23 111.3 97 57.7
Aqoxy2G03601 Aquilegia oxysepala HOM05D003616 ORTHO05D004289 6.5e-23 110.9 90 62.2
CANSAT25G0701 Cannabis sativa HOM05D003616 ORTHO05D004289 6.5e-23 110.9 91 63.7
vmacro07569 Vaccinium macrocarpon HOM05D003616 ORTHO05D004289 6.5e-23 110.9 90 61.1
Thecc.08G048000 Theobroma cacao HOM05D003616 ORTHO05D004289 8.4e-23 110.5 90 61.1
CDE05G1955 Ceratophyllum demersum HOM05D003616 ORTHO05D004289 1.1e-22 110.2 90 58.9
QL02p012220 Quercus lobata HOM05D003616 ORTHO05D004289 1.1e-22 110.2 90 60.0
SGA_v2.0_scaffold25G11209 Striga asiatica HOM05D003616 ORTHO05D004289 1.1e-22 110.2 108 53.7
Ciclev10001861m.g Citrus clementina HOM05D003616 ORTHO05D004289 1.9e-22 109.4 90 60.0
Solyc04g081740.3 Solanum lycopersicum HOM05D003616 ORTHO05D004289 1.9e-22 109.4 90 56.7
Sopen04g035370 Solanum pennellii HOM05D003616 ORTHO05D004289 1.9e-22 109.4 90 56.7
CiPaw.07G146600 Carya illinoinensis HOM05D003616 ORTHO05D004289 2.5e-22 109.0 90 61.1
Nitab4.5_0006505g0020 Nicotiana tabacum HOM05D003616 ORTHO05D004289 3.2e-22 108.6 90 55.6
CAN.G311.50 Capsicum annuum HOM05D003616 ORTHO05D004289 4.2e-22 108.2 90 56.7
MD08G1010100 Malus domestica HOM05D003616 ORTHO05D004289 5.5e-22 107.8 90 61.1
ClCG08G014130 Citrullus lanatus HOM05D003616 ORTHO05D004289 7.2e-22 107.5 97 55.7
EL10Ac1g02157 Beta vulgaris HOM05D003616 ORTHO05D004289 9.3e-22 107.1 97 56.7
MELO3C011352.2 Cucumis melo HOM05D003616 ORTHO05D004289 9.3e-22 107.1 97 56.7
TWI12G0315 Tripterygium wilfordii HOM05D003616 ORTHO05D004289 9.3e-22 107.1 90 56.7
ATR0180G023 Amborella trichopoda HOM05D003616 ORTHO05D004289 1.2e-21 106.7 90 57.8
PGR031G0359 Punica granatum HOM05D003616 ORTHO05D004289 1.2e-21 106.7 90 58.9
TPR.G38175 Trifolium pratense HOM05D003616 ORTHO05D004289 1.2e-21 106.7 78 65.4
Haze_22668 Corylus avellana HOM05D003616 ORTHO05D004289 1.6e-21 106.3 76 67.1
AT5G42150 Arabidopsis thaliana HOM05D003616 ORTHO05D004289 2.1e-21 105.9 90 60.0
CsaV3_2G024290 Cucumis sativus L. HOM05D003616 ORTHO05D004289 2.1e-21 105.9 97 55.7
Duzib093G0398 Durio zibethinus HOM05D003616 ORTHO05D004289 2.1e-21 105.9 90 57.8
Eucgr.H00953 Eucalyptus grandis HOM05D003616 ORTHO05D004289 2.1e-21 105.9 90 57.8
HPP92_015015 Vanilla planifolia HOM05D003616 ORTHO05D004289 2.1e-21 105.9 90 60.0
Ah.11g040000 Amaranthus hybridus HOM05D003616 ORTHO05D004289 2.7e-21 105.5 97 54.6
AL8G19670 Arabidopsis lyrata HOM05D003616 ORTHO05D004289 2.7e-21 105.5 90 58.9
BcaB04g19405 Brassica carinata HOM05D003616 ORTHO05D004289 2.7e-21 105.5 90 57.8
Cc10_g01410 Coffea canephora HOM05D003616 ORTHO05D004289 3.5e-21 105.1 91 54.9
CARHR284720 Cardamine hirsuta HOM05D003616 ORTHO05D004289 6.1e-21 104.4 90 57.8
Medtr3g114070 Medicago truncatula HOM05D003616 ORTHO05D004289 6.1e-21 104.4 90 56.7
Rhsim06G0018600 Rhododendron simsii HOM05D003616 ORTHO05D004289 1.3e-20 103.2 90 55.6
Carub.0008s0714 Capsella rubella HOM05D003616 ORTHO05D004289 1.8e-20 102.8 90 56.7
Sp7g08670 Schrenkiella parvula HOM05D003616 ORTHO05D004289 1.8e-20 102.8 90 58.9
FvH4_5g17390 Fragaria vesca HOM05D003616 ORTHO05D004289 2.3e-20 102.4 90 56.7
Thhalv10027850m.g Eutrema salsugineum HOM05D003616 ORTHO05D004289 3.9e-20 101.7 90 55.6
ATR0626G339 Amborella trichopoda HOM05D003616 ORTHO05D004289 5.1e-20 101.3 78 61.5
BcaC03g16480 Brassica carinata HOM05D003616 ORTHO05D004289 9.7e-19 97.1 90 56.7
A02p27080 Brassica napus HOM05D003616 ORTHO05D004289 9.7e-19 97.1 90 56.7
C02p42910 Brassica napus HOM05D003616 ORTHO05D004289 9.7e-19 97.1 90 56.7
BolC2t10330H Brassica oleracea HOM05D003616 ORTHO05D004289 9.7e-19 97.1 90 56.7
BraA02t07726Z Brassica rapa HOM05D003616 ORTHO05D004289 9.7e-19 97.1 90 56.7
CBR_g28548 Chara braunii HOM05D003616 ORTHO05D004289 1.3e-18 96.7 97 52.6
SMO140G0111 Selaginella moellendorffii HOM05D003616 ORTHO05D004289 1.4e-17 93.2 120 42.5
Pp3c22_13980 Physcomitrium patens HOM05D003616 ORTHO05D004289 6.9e-17 90.9 92 51.1
Mapoly0126s0030 Marchantia polymorpha HOM05D003616 ORTHO05D004289 1.2e-16 90.1 91 49.5
MD15G1010000 Malus domestica HOM05D003616 ORTHO05D004289 2.6e-16 89.0 76 57.9
Aa31LG9G12310 Aethionema arabicum HOM05D003616 ORTHO05D004289 4.5e-16 88.2 90 51.1
Nn3g18380 Nelumbo nucifera HOM05D003616 ORTHO05D004289 7.7e-16 87.4 47 85.1
Pp3c19_15500 Physcomitrium patens HOM05D003616 ORTHO05D004289 7.7e-16 87.4 101 45.5
Oeu007366.1 Olea europaea HOM05D003616 ORTHO05D004289 3.8e-15 85.1 45 77.8
THA.LOC104798670 Tarenaya hassleriana HOM05D003616 ORTHO05D004289 8.5e-15 84.0 90 48.9
MCO10G259 Micromonas commoda HOM05D003616 ORTHO05D004289 7.2e-14 80.9 94 47.9
Hund01671 Selenicereus undatus HOM05D003616 ORTHO05D383349 5.1e-12 74.7 73 53.4
Eucgr.H00955 Eucalyptus grandis HOM05D003616 ORTHO05D004289 2.0e-11 72.8 90 43.3
VMungo1309G0063 Vigna mungo HOM05D003616 ORTHO05D004289 4.3e-11 71.6 77 50.6
PRCOL_00004876 Prasinoderma coloniale HOM05D003616 ORTHO05D004289 7.4e-11 70.9 62 59.7
VMungo1309G1258 Vigna mungo HOM05D003616 ORTHO05D004289 7.4e-11 70.9 87 44.8
Cre07.g319100 Chlamydomonas reinhardtii HOM05D003616 ORTHO05D004289 1.1e-09 67.0 53 56.6
Lj9A420T36 Lonicera japonica HOM05D003616 ORTHO05D004289 5.9e-08 61.2 30 90.0
Lalb_Chr22g0353561 Lupinus albus HOM05D003616 ORTHO05D004289 6.5e-07 57.8 28 85.7


User provided reference genes

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