Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17772 Vaccinium macrocarpon HOM05D003493 ORTHO05D003980 1.5e-245 852.4 439 100.0
Actinidia06838 Actinidia chinensis HOM05D003493 ORTHO05D003980 4.9e-180 634.8 430 75.6
CSS0005530 Camellia sinensis var. sinensis HOM05D003493 ORTHO05D003980 7.9e-162 574.3 434 71.7
Hma1.2p1_0807F.1_g221460 Hydrangea macrophylla HOM05D003493 ORTHO05D003980 1.2e-154 550.4 430 67.4
Potri.017G155000 Populus trichocarpa HOM05D003493 ORTHO05D003980 3.6e-138 495.7 431 61.0
TAR622G0755 Trochodendron aralioides HOM05D003493 ORTHO05D003980 7.9e-138 494.6 416 65.4
Dinv11742 Davidia involucrata HOM05D003493 ORTHO05D003980 2.3e-137 493.0 431 63.3
Haze_18391 Corylus avellana HOM05D003493 ORTHO05D003980 1.5e-133 480.3 430 58.8
Atru.chr9.57 Acer truncatum HOM05D003493 ORTHO05D003980 1.7e-132 476.9 429 59.0
GSVIVG01024229001 Vitis vinifera HOM05D003493 ORTHO05D003980 1.7e-132 476.9 431 59.9
Oeu063704.1 Olea europaea HOM05D003493 ORTHO05D003980 2.9e-132 476.1 428 60.5
Manes.02G118200 Manihot esculenta HOM05D003493 ORTHO05D003980 1.1e-131 474.2 431 58.9
Prupe.5G246400 Prunus persica HOM05D003493 ORTHO05D003980 7.2e-131 471.5 434 59.0
QL10p036794 Quercus lobata HOM05D003493 ORTHO05D003980 2.1e-130 469.9 430 59.1
Sabra17G0126700 Salix brachista HOM05D003493 ORTHO05D003980 4.7e-130 468.8 431 58.9
QL10p035454 Quercus lobata HOM05D003493 ORTHO05D003980 1.4e-129 467.2 430 58.6
Manes.01G159600 Manihot esculenta HOM05D003493 ORTHO05D003980 2.0e-128 463.4 431 57.8
MD14G1000100 Malus domestica HOM05D003493 ORTHO05D003980 2.6e-128 463.0 432 57.9
Glyma.09G160200 Glycine max HOM05D003493 ORTHO05D003980 9.7e-128 461.1 429 58.0
Lj9A410T67 Lonicera japonica HOM05D003493 ORTHO05D003980 1.3e-127 460.7 431 60.8
Lalb_Chr14g0370061 Lupinus albus HOM05D003493 ORTHO05D003980 1.3e-127 460.7 427 57.1
TWI36G1567 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 1.7e-127 460.3 433 56.4
Nitab4.5_0004170g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 2.4e-126 456.4 429 58.0
CiPaw.16G076700 Carya illinoinensis HOM05D003493 ORTHO05D003980 7.0e-126 454.9 429 56.2
Oeu034417.1 Olea europaea HOM05D003493 ORTHO05D003980 1.2e-125 454.1 430 59.1
Aqoxy3G04358 Aquilegia oxysepala HOM05D003493 ORTHO05D003980 2.0e-125 453.4 430 55.8
Solyc03g019770.4 Solanum lycopersicum HOM05D003493 ORTHO05D003980 3.5e-125 452.6 432 57.2
Cfa017818 Carpinus fangiana HOM05D003493 ORTHO05D003980 5.9e-125 451.8 429 56.2
DCAR_011394 Daucus carota HOM05D003493 ORTHO05D003980 1.7e-124 450.3 434 57.4
Glyma.16G209600 Glycine max HOM05D003493 ORTHO05D003980 3.8e-124 449.1 429 56.6
Sopen03g029860 Solanum pennellii HOM05D003493 ORTHO05D003980 3.8e-124 449.1 432 56.7
Nitab4.5_0000854g0120 Nicotiana tabacum HOM05D003493 ORTHO05D003980 1.9e-123 446.8 436 55.7
Phvul.004G135600 Phaseolus vulgaris HOM05D003493 ORTHO05D003980 2.5e-123 446.4 437 55.6
CAN.G65.58 Capsicum annuum HOM05D003493 ORTHO05D003980 4.2e-123 445.7 427 56.4
TWI81G0199 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 4.2e-123 445.7 433 55.9
Thecc.06G006900 Theobroma cacao HOM05D003493 ORTHO05D003980 7.2e-123 444.9 433 56.8
Duzib192G0928 Durio zibethinus HOM05D003493 ORTHO05D003980 4.7e-122 442.2 436 56.7
Duzib235G1490 Durio zibethinus HOM05D003493 ORTHO05D003980 6.1e-122 441.8 434 56.9
VMungo0464G0665 Vigna mungo HOM05D003493 ORTHO05D003980 6.1e-122 441.8 431 55.7
Peaxi162Scf00643g00431 Petunia axillaris HOM05D003493 ORTHO05D003980 1.0e-121 441.0 427 56.0
SalBow5G1620 Salvia bowleyana HOM05D003493 ORTHO05D003980 1.8e-121 440.3 432 57.9
RcHm_v2.0_Chr7g0176841 Rosa chinensis HOM05D003493 ORTHO05D003980 2.3e-121 439.9 431 56.4
Ca_25303_v3 Cicer arietinum L. HOM05D003493 ORTHO05D003980 4.0e-121 439.1 428 54.4
Nitab4.5_0003367g0050 Nicotiana tabacum HOM05D003493 ORTHO05D003980 4.0e-121 439.1 419 57.5
Solyc06g072110.4 Solanum lycopersicum HOM05D003493 ORTHO05D003980 1.2e-120 437.6 429 55.5
FAN04G2252 Fragaria x ananassa HOM05D003493 ORTHO05D003980 4.4e-120 435.6 439 55.6
Sopen06g028400 Solanum pennellii HOM05D003493 ORTHO05D003980 1.7e-119 433.7 429 55.2
MSTRG.23219 Avicennia marina HOM05D003493 ORTHO05D003980 2.2e-119 433.3 417 59.2
CAN.G861.8 Capsicum annuum HOM05D003493 ORTHO05D003980 2.2e-119 433.3 428 54.0
Eucgr.H00671 Eucalyptus grandis HOM05D003493 ORTHO05D003980 2.2e-119 433.3 430 54.4
FvH4_5g18670 Fragaria vesca HOM05D003493 ORTHO05D003980 2.8e-119 433.0 444 55.0
FAN13G0815 Fragaria x ananassa HOM05D003493 ORTHO05D003980 6.3e-119 431.8 444 55.2
Lj5A169T97 Lonicera japonica HOM05D003493 ORTHO05D003980 6.3e-119 431.8 404 60.6
CANSAT80G2441 Cannabis sativa HOM05D003493 ORTHO05D003980 1.1e-118 431.0 434 56.2
Lj2g0009881 Lotus japonicus HOM05D003493 ORTHO05D003980 2.4e-118 429.9 429 54.5
Gohir.A05G111700 Gossypium hirsutum HOM05D003493 ORTHO05D003980 5.3e-118 428.7 435 55.6
FAN08G2984 Fragaria x ananassa HOM05D003493 ORTHO05D003980 2.0e-117 426.8 439 55.4
Lalb_Chr06g0168711 Lupinus albus HOM05D003493 ORTHO05D003980 2.0e-117 426.8 428 55.6
PSO782G2561 Papaver somniferum HOM05D003493 ORTHO05D003980 2.0e-117 426.8 405 57.0
PGR083G2526 Punica granatum HOM05D003493 ORTHO05D003980 3.5e-117 426.0 431 53.1
Nitab4.5_0000477g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 5.9e-117 425.2 439 53.5
FAN18G2761 Fragaria x ananassa HOM05D003493 ORTHO05D003980 7.7e-117 424.9 444 54.3
Gohir.D05G112200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 7.7e-117 424.9 435 55.2
Gorai.009G116400 Gossypium raimondii HOM05D003493 ORTHO05D003980 7.7e-117 424.9 435 55.2
Lalb_Chr21g0311711 Lupinus albus HOM05D003493 ORTHO05D003980 1.7e-116 423.7 428 55.4
Gohir.A06G181400 Gossypium hirsutum HOM05D003493 ORTHO05D003980 8.5e-116 421.4 431 54.3
Peaxi162Scf01390g00035 Petunia axillaris HOM05D003493 ORTHO05D003980 2.5e-115 419.9 432 53.5
TPR.G8860 Trifolium pratense HOM05D003493 ORTHO05D003980 4.2e-115 419.1 426 53.3
Migut.O00291 Erythranthe guttata HOM05D003493 ORTHO05D003980 7.2e-115 418.3 425 55.8
PSO063G3260 Papaver somniferum HOM05D003493 ORTHO05D003980 1.6e-114 417.2 405 56.0
Medtr6g066300 Medicago truncatula HOM05D003493 ORTHO05D003980 8.0e-114 414.8 425 53.2
Gohir.D06G188200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 1.8e-113 413.7 431 53.1
Gorai.010G220600 Gossypium raimondii HOM05D003493 ORTHO05D003980 1.8e-113 413.7 431 53.1
arahy.Tifrunner.gnm1.ann1.ZVJ3VC Arachis hypogaea HOM05D003493 ORTHO05D003980 3.0e-113 412.9 428 52.1
Sc12g0007780 Simmondsia chinensis HOM05D003493 ORTHO05D003980 5.2e-113 412.1 430 53.3
Psat6g054360 Pisum sativum HOM05D003493 ORTHO05D003980 1.2e-112 411.0 430 53.0
Lj5g0000329 Lotus japonicus HOM05D003493 ORTHO05D003980 4.4e-112 409.1 429 53.1
TPR.G8876 Trifolium pratense HOM05D003493 ORTHO05D003980 4.4e-112 409.1 435 53.1
Psat1g117720 Pisum sativum HOM05D003493 ORTHO05D003980 7.5e-112 408.3 466 49.8
ClCG01G014650 Citrullus lanatus HOM05D003493 ORTHO05D003980 9.8e-112 407.9 419 51.6
Glyma.10G174700 Glycine max HOM05D003493 ORTHO05D003980 2.2e-111 406.8 428 52.3
SGA_v2.0_scaffold25G10715 Striga asiatica HOM05D003493 ORTHO05D003980 8.3e-111 404.8 434 52.3
MELO3C002186.2 Cucumis melo HOM05D003493 ORTHO05D003980 1.8e-110 403.7 430 51.9
Sed0011518 Sechium edule HOM05D003493 ORTHO05D003980 9.1e-110 401.4 418 51.2
CsaV3_1G007680 Cucumis sativus L. HOM05D003493 ORTHO05D003980 1.7e-108 397.1 430 50.9
MBI06_g37980_MAGBIO Magnolia biondii HOM05D003493 ORTHO05D003980 5.0e-108 395.6 442 50.9
Medtr1g077470 Medicago truncatula HOM05D003493 ORTHO05D003980 8.6e-108 394.8 437 52.2
THA.LOC104812198 Tarenaya hassleriana HOM05D003493 ORTHO05D003980 1.9e-107 393.7 416 52.6
Phvul.L006701 Phaseolus vulgaris HOM05D003493 ORTHO05D003980 4.2e-107 392.5 428 49.8
Nn3g18516 Nelumbo nucifera HOM05D003493 ORTHO05D003980 4.7e-106 389.0 351 60.1
VMungo0720G0805 Vigna mungo HOM05D003493 ORTHO05D003980 4.7e-106 389.0 425 49.6
ECA232G4824 Erigeron canadensis HOM05D003493 ORTHO05D003980 6.1e-106 388.7 427 53.6
HanXRQChr15g0492171 Helianthus annuus HOM05D003493 ORTHO05D003980 6.1e-106 388.7 420 54.0
Lsat_1_v5_gn_0_10721 Lactuca sativa HOM05D003493 ORTHO05D003980 8.0e-106 388.3 416 53.1
Ca_09923_v3 Cicer arietinum L. HOM05D003493 ORTHO05D003980 2.8e-103 379.8 386 53.6
PGSC0003DMG400015207 Solanum tuberosum HOM05D003493 ORTHO05D003980 3.2e-102 376.3 362 56.6
Cc04_g13620 Coffea canephora HOM05D003493 ORTHO05D003980 1.0e-100 371.3 367 57.5
ATR0124G004 Amborella trichopoda HOM05D003493 ORTHO05D003980 9.5e-99 364.8 448 49.1
Thhalv10018153m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 1.2e-98 364.4 431 47.3
CARHR018430 Cardamine hirsuta HOM05D003493 ORTHO05D003980 2.8e-98 363.2 443 47.4
arahy.Tifrunner.gnm1.ann1.W71D15 Arachis hypogaea HOM05D003493 ORTHO05D003980 3.6e-98 362.8 480 44.4
HanXRQChr08g0220881 Helianthus annuus HOM05D003493 ORTHO05D003980 3.6e-98 362.8 429 49.2
BolC2t09128H Brassica oleracea HOM05D003493 ORTHO05D003980 1.4e-97 360.9 441 48.1
A02p18540 Brassica napus HOM05D003493 ORTHO05D003980 4.0e-97 359.4 444 47.5
BraA02t06893Z Brassica rapa HOM05D003493 ORTHO05D003980 5.2e-97 359.0 441 48.5
Sp1g15900 Schrenkiella parvula HOM05D003493 ORTHO05D003980 1.2e-96 357.8 445 47.0
C02p30730 Brassica napus HOM05D003493 ORTHO05D003980 1.5e-96 357.5 441 47.8
Zm00001eb190790 Zea mays HOM05D003493 ORTHO05D003980 2.0e-96 357.1 447 47.4
Carub.0002s1999 Capsella rubella HOM05D003493 ORTHO05D003980 7.5e-96 355.1 437 46.0
Thhalv10006829m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 1.7e-95 354.0 442 47.7
BcaC07g41354 Brassica carinata HOM05D003493 ORTHO05D003980 3.2e-94 349.7 437 48.1
AL2G32970 Arabidopsis lyrata HOM05D003493 ORTHO05D003980 5.4e-94 349.0 446 46.9
AT1G73200 Arabidopsis thaliana HOM05D003493 ORTHO05D003980 5.4e-94 349.0 446 46.4
Aa31LG7G2640 Aethionema arabicum HOM05D003493 ORTHO05D003980 2.7e-93 346.7 463 43.4
Aa31LG4G3480 Aethionema arabicum HOM05D003493 ORTHO05D003980 3.5e-93 346.3 442 43.7
BolC5t30322H Brassica oleracea HOM05D003493 ORTHO05D003980 3.5e-93 346.3 411 49.1
CARHR066210 Cardamine hirsuta HOM05D003493 ORTHO05D003980 3.5e-93 346.3 435 43.7
C05p16200 Brassica napus HOM05D003493 ORTHO05D003980 6.0e-93 345.5 438 47.5
Sp5g28170 Schrenkiella parvula HOM05D003493 ORTHO05D003980 7.8e-93 345.1 440 45.0
Carub.0001s1755 Capsella rubella HOM05D003493 ORTHO05D003980 1.0e-92 344.7 441 44.4
AL1G30180 Arabidopsis lyrata HOM05D003493 ORTHO05D003980 1.7e-92 344.0 443 45.1
C08p43630 Brassica napus HOM05D003493 ORTHO05D003980 3.9e-92 342.8 409 48.9
BolC8t51909H Brassica oleracea HOM05D003493 ORTHO05D003980 3.9e-92 342.8 409 48.9
AUR62041605 Chenopodium quinoa HOM05D003493 ORTHO05D003980 6.6e-92 342.0 431 45.7
A09p60190 Brassica napus HOM05D003493 ORTHO05D003980 2.5e-91 340.1 403 48.9
BraA09t41388Z Brassica rapa HOM05D003493 ORTHO05D003980 4.3e-91 339.3 403 48.9
BraA06t24529Z Brassica rapa HOM05D003493 ORTHO05D003980 1.6e-90 337.4 414 47.6
AT1G17820 Arabidopsis thaliana HOM05D003493 ORTHO05D003980 2.8e-90 336.7 446 44.4
A06p13880 Brassica napus HOM05D003493 ORTHO05D003980 2.8e-90 336.7 435 46.0
C06p47340 Brassica napus HOM05D003493 ORTHO05D003980 6.2e-90 335.5 438 45.4
A07p39150 Brassica napus HOM05D003493 ORTHO05D003980 8.0e-90 335.1 437 45.1
BolC6t39773H Brassica oleracea HOM05D003493 ORTHO05D003980 1.1e-89 334.7 421 46.1
BcaB07g34006 Brassica carinata HOM05D003493 ORTHO05D003980 1.4e-89 334.3 434 45.9
arahy.Tifrunner.gnm1.ann1.W0PAIX Arachis hypogaea HOM05D003493 ORTHO05D003980 1.8e-89 334.0 447 45.0
BraA07t31464Z Brassica rapa HOM05D003493 ORTHO05D003980 2.3e-89 333.6 420 45.7
EL10Ac8g19467 Beta vulgaris HOM05D003493 ORTHO05D003980 6.0e-85 318.9 438 44.7
arahy.Tifrunner.gnm1.ann1.K1F8KI Arachis hypogaea HOM05D003493 ORTHO05D003980 1.9e-83 313.9 489 41.1
CiPaw.15G108700 Carya illinoinensis HOM05D003493 ORTHO05D003980 1.6e-82 310.8 324 55.2
Hund06742 Selenicereus undatus HOM05D003493 ORTHO05D001641 3.1e-81 306.6 392 45.9
Zm00001eb228970 Zea mays HOM05D003493 ORTHO05D003980 2.0e-80 303.9 436 43.6
Lj9C232G5 Lonicera japonica HOM05D003493 ORTHO05D003980 6.4e-79 298.9 331 54.4
BcaNung05482 Brassica carinata HOM05D003493 ORTHO05D003980 1.8e-73 280.8 424 44.6
Potri.018G152400 Populus trichocarpa HOM05D003493 ORTHO05D003980 3.8e-71 273.1 278 54.3
Ciclev10019478m.g Citrus clementina HOM05D003493 ORTHO05D003980 2.4e-70 270.4 275 54.2
SEGI_25111 Sequoiadendron giganteum HOM05D003493 ORTHO05D003980 9.3e-70 268.5 442 42.1
CDE07G1702 Ceratophyllum demersum HOM05D003493 ORTHO05D003980 1.6e-66 257.7 429 36.8
CDE04G1302 Ceratophyllum demersum HOM05D003493 ORTHO05D003980 2.1e-66 257.3 431 38.3
AUR62040635 Chenopodium quinoa HOM05D003493 ORTHO05D003980 6.9e-57 225.7 326 41.4
Os02g0827500 Oryza sativa ssp. japonica HOM05D003493 ORTHO05D003980 5.8e-56 222.6 295 45.1
PGSC0003DMG400027062 Solanum tuberosum HOM05D003493 ORTHO05D003980 2.9e-55 220.3 273 47.6
AagrBONN_evm.TU.Sc2ySwM_368.2475 Anthoceros agrestis HOM05D003493 ORTHO05D003980 3.0e-52 210.3 447 32.9
Rhsim05G0011100 Rhododendron simsii HOM05D003493 ORTHO05D003980 8.1e-50 202.2 117 85.5
arahy.Tifrunner.gnm1.ann1.28MV8S Arachis hypogaea HOM05D003493 ORTHO05D003980 3.9e-44 183.3 170 56.5
Gohir.A05G111401 Gossypium hirsutum HOM05D003493 ORTHO05D003980 8.7e-44 182.2 319 38.2
Mapoly0036s0110 Marchantia polymorpha HOM05D003493 ORTHO05D003980 4.3e-43 179.9 426 31.9
COL.COLO4_22900 Corchorus olitorius HOM05D003493 ORTHO05D003980 2.8e-42 177.2 150 65.3
SMO361G0167 Selaginella moellendorffii HOM05D003493 ORTHO05D003980 4.5e-40 169.9 436 31.4
arahy.Tifrunner.gnm1.ann1.Y1U1WE Arachis hypogaea HOM05D003493 ORTHO05D003980 6.5e-39 166.0 145 57.9
Pp3c14_11980 Physcomitrium patens HOM05D003493 ORTHO05D003980 3.0e-36 157.1 459 28.3
arahy.Tifrunner.gnm1.ann1.I3UW9X Arachis hypogaea HOM05D003493 ORTHO05D003980 8.7e-36 155.6 146 56.8
Cpa.g.c43819 Carica papaya HOM05D003493 ORTHO05D003980 7.4e-35 152.5 116 61.2
Pp3c5_12280 Physcomitrium patens HOM05D003493 ORTHO05D003980 7.4e-35 152.5 455 27.9
arahy.Tifrunner.gnm1.ann1.XZC4F6 Arachis hypogaea HOM05D003493 ORTHO05D003980 2.2e-34 151.0 355 34.1
Pp3c1_25660 Physcomitrium patens HOM05D003493 ORTHO05D003980 5.9e-32 142.9 474 25.9
arahy.Tifrunner.gnm1.ann1.LRB6U9 Arachis hypogaea HOM05D003493 ORTHO05D003980 1.4e-30 138.3 135 55.6
Pp3c17_10430 Physcomitrium patens HOM05D003493 ORTHO05D003980 9.4e-30 135.6 418 28.0
Pp3c6_14220 Physcomitrium patens HOM05D003493 ORTHO05D003980 1.6e-29 134.8 481 24.7
Hund22361 Selenicereus undatus HOM05D003493 ORTHO05D003980 1.7e-23 114.8 124 47.6
CAN.G14.48 Capsicum annuum HOM05D003493 ORTHO05D003980 1.5e-19 101.7 156 43.6
arahy.Tifrunner.gnm1.ann1.3LZL4F Arachis hypogaea HOM05D003493 ORTHO05D003980 5.9e-16 89.7 79 57.0
arahy.Tifrunner.gnm1.ann1.HH6FHR Arachis hypogaea HOM05D003493 ORTHO05D003980 2.2e-15 87.8 78 56.4
AUR62040636 Chenopodium quinoa HOM05D003493 ORTHO05D003980 5.0e-15 86.7 80 58.8
Peaxi162Scf00050g00625 Petunia axillaris HOM05D000386 ORTHO05D000406 1.5e-14 85.1 86 50.0
Ah.14g085840 Amaranthus hybridus HOM05D005380 ORTHO05D006601 3.6e-13 80.5 81 55.6
CAN.G852.8 Capsicum annuum HOM05D003493 ORTHO05D003980 1.6e-08 65.1 70 50.0


User provided reference genes

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